REPIN1-AS1

Summary

REPIN1-AS1 (REPIN1 antisense RNA 1, HGNC:41201) is a long non-coding RNA gene on chromosome 7q36.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41201
Approved symbol	REPIN1-AS1
Name	REPIN1 antisense RNA 1
Location	7q36.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000240449
Ensembl biotype	lncRNA
Entrez	105375563
RNAcentral	URS00026A1A41 — lncRNA, 1750 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000488310, ENST00000728192, ENST00000728193, ENST00000728194

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000488310 — 3 exons

Exon	Start	End
ENSE00001827790	150363777	150364177
ENSE00001862965	150372493	150372590
ENSE00001887606	150371078	150371155

Expression profiles

Bgee: expression breadth ubiquitous, 153 present calls, max score 87.98.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0053 / max 2.9508, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
86786	0.0053	3

Top tissues by expression

239 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.98	gold quality
islet of Langerhans	UBERON:0000006	76.78	gold quality
muscle of leg	UBERON:0001383	75.45	gold quality
cortical plate	UBERON:0005343	75.41	gold quality
rectum	UBERON:0001052	75.32	gold quality
gastrocnemius	UBERON:0001388	74.80	gold quality
granulocyte	CL:0000094	72.68	gold quality
transverse colon	UBERON:0001157	71.74	gold quality
mucosa of transverse colon	UBERON:0004991	71.49	gold quality
right adrenal gland cortex	UBERON:0035827	70.77	gold quality
ventricular zone	UBERON:0003053	70.36	gold quality
tendon of biceps brachii	UBERON:0008188	70.36	gold quality
left adrenal gland cortex	UBERON:0035825	70.07	gold quality
left adrenal gland	UBERON:0001234	70.04	gold quality
nucleus accumbens	UBERON:0001882	69.96	gold quality
right adrenal gland	UBERON:0001233	69.72	gold quality
pancreas	UBERON:0001264	68.90	gold quality
colonic epithelium	UBERON:0000397	68.62	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.48	gold quality
ganglionic eminence	UBERON:0004023	68.35	gold quality
adrenal cortex	UBERON:0001235	68.13	gold quality
apex of heart	UBERON:0002098	68.11	gold quality
metanephros cortex	UBERON:0010533	68.09	gold quality
prefrontal cortex	UBERON:0000451	68.03	gold quality
adrenal gland	UBERON:0002369	67.93	gold quality
right lobe of liver	UBERON:0001114	67.92	gold quality
putamen	UBERON:0001874	67.92	gold quality
stromal cell of endometrium	CL:0002255	67.62	gold quality
right frontal lobe	UBERON:0002810	67.59	gold quality
right uterine tube	UBERON:0001302	67.49	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.