REV3L-IT1

Summary

REV3L-IT1 (REV3L intronic transcript 1, HGNC:41377) is a long non-coding RNA gene on chromosome 6q21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41377
Approved symbol	REV3L-IT1
Name	REV3L intronic transcript 1
Location	6q21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229276
Ensembl biotype	lncRNA
Entrez	106478974
RNAcentral	URS0000426D93 — lncRNA, 382 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000411895

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000411895 — 2 exons

Exon	Start	End
ENSE00001712997	111360641	111360721
ENSE00001765618	111361307	111361607

Expression profiles

Bgee: expression breadth ubiquitous, 125 present calls, max score 85.55.

Top tissues by expression

125 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.55	gold quality
sural nerve	UBERON:0015488	83.67	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.35	gold quality
cortical plate	UBERON:0005343	73.99	gold quality
muscle tissue	UBERON:0002385	70.16	gold quality
colonic epithelium	UBERON:0000397	68.92	silver quality
hindlimb stylopod muscle	UBERON:0004252	68.46	gold quality
ganglionic eminence	UBERON:0004023	68.05	gold quality
smooth muscle tissue	UBERON:0001135	66.88	gold quality
skeletal muscle tissue	UBERON:0001134	66.41	gold quality
calcaneal tendon	UBERON:0003701	64.58	gold quality
bone marrow	UBERON:0002371	61.89	gold quality
placenta	UBERON:0001987	60.71	gold quality
monocyte	CL:0000576	60.58	gold quality
gall bladder	UBERON:0002110	60.58	gold quality
primary visual cortex	UBERON:0002436	60.55	gold quality
blood	UBERON:0000178	58.85	gold quality
stromal cell of endometrium	CL:0002255	58.84	gold quality
liver	UBERON:0002107	58.71	gold quality
lymph node	UBERON:0000029	58.35	gold quality
mucosa of transverse colon	UBERON:0004991	58.29	gold quality
kidney	UBERON:0002113	58.22	gold quality
cerebellar cortex	UBERON:0002129	57.85	gold quality
cerebellar hemisphere	UBERON:0002245	57.82	gold quality
cerebellum	UBERON:0002037	57.81	gold quality
islet of Langerhans	UBERON:0000006	57.73	gold quality
cortex of kidney	UBERON:0001225	57.72	gold quality
muscle of leg	UBERON:0001383	57.64	gold quality
duodenum	UBERON:0002114	57.30	gold quality
endometrium	UBERON:0001295	57.02	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.42

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.