RFX2-AS1

Summary

RFX2-AS1 (RFX2 antisense RNA 1, HGNC:58204) is a long non-coding RNA gene on chromosome 19p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58204
Approved symbol	RFX2-AS1
Name	RFX2 antisense RNA 1
Location	19p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267262
Ensembl biotype	lncRNA
Entrez	139281648
RNAcentral	URS000015C038 — lncRNA, 567 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000587759, ENST00000692521, ENST00000723439, ENST00000723440, ENST00000723441

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000587759 — 2 exons

Exon	Start	End
ENSE00002834739	6077020	6077119
ENSE00002916650	6067953	6068419

Expression profiles

Bgee: expression breadth ubiquitous, 115 present calls, max score 93.34.

Top tissues by expression

115 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.34	gold quality
bone marrow cell	CL:0002092	75.90	gold quality
right testis	UBERON:0004534	72.35	gold quality
left testis	UBERON:0004533	71.95	gold quality
testis	UBERON:0000473	71.75	gold quality
colonic epithelium	UBERON:0000397	68.04	silver quality
sural nerve	UBERON:0015488	66.32	gold quality
bone marrow	UBERON:0002371	66.02	gold quality
skeletal muscle tissue	UBERON:0001134	63.30	silver quality
liver	UBERON:0002107	63.13	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.77	gold quality
calcaneal tendon	UBERON:0003701	61.62	gold quality
blood	UBERON:0000178	61.36	gold quality
stromal cell of endometrium	CL:0002255	60.18	gold quality
islet of Langerhans	UBERON:0000006	55.93	gold quality
lymph node	UBERON:0000029	54.51	gold quality
monocyte	CL:0000576	54.34	gold quality
mucosa of stomach	UBERON:0001199	54.27	gold quality
gall bladder	UBERON:0002110	54.24	gold quality
cortex of kidney	UBERON:0001225	54.22	gold quality
duodenum	UBERON:0002114	54.02	gold quality
placenta	UBERON:0001987	53.53	gold quality
urinary bladder	UBERON:0001255	52.87	gold quality
vermiform appendix	UBERON:0001154	52.86	gold quality
tonsil	UBERON:0002372	52.76	gold quality
corpus callosum	UBERON:0002336	52.74	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.72	gold quality
muscle of leg	UBERON:0001383	52.41	gold quality
endometrium	UBERON:0001295	51.24	gold quality
small intestine	UBERON:0002108	50.98	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.