RGS5
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Summary
RGS5 (regulator of G protein signaling 5, HGNC:10001) is a protein-coding gene on chromosome 1q23.3, encoding Regulator of G-protein signaling 5 (O15539). Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form.
This locus represents naturally occurring readthrough transcription between the neighboring LOC127814295 (uncharacterized LOC127814295) and RGS5 (regulator of G-protein signaling 5) genes on chromosome 1. Some variants of the readthrough transcript encode novel proteins with unique N-termini.
Source: NCBI Gene 8490 — RefSeq curated summary.
At a glance
- Gene–disease (curated): essential hypertension, genetic (No Known Disease Relationship, GenCC)
- GWAS associations: 6
- Clinical variants (ClinVar): 26 total
- Phenotypes (HPO): 4
- MANE Select transcript:
NM_003617
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:10001 |
| Approved symbol | RGS5 |
| Name | regulator of G protein signaling 5 |
| Location | 1q23.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000143248 |
| Ensembl biotype | protein_coding |
| OMIM | 603276 |
| Entrez | 8490 |
Gene structure
Transcript identifiers
Ensembl transcripts: 13 — 7 protein_coding, 5 protein_coding_CDS_not_defined, 1 retained_intron
ENST00000313961, ENST00000367903, ENST00000428971, ENST00000469495, ENST00000525894, ENST00000527988, ENST00000530241, ENST00000530507, ENST00000531476, ENST00000531954, ENST00000534288, ENST00000618415, ENST00000950224
RefSeq mRNA: 12 — MANE Select: NM_003617
NM_001195303, NM_001254748, NM_001254749, NM_001414472, NM_001414473, NM_001414474, NM_001414475, NM_001414476, NM_001414477, NM_001414478, NM_001414479, NM_003617
CCDS: CCDS1244, CCDS55652, CCDS58041
Canonical transcript exons
ENST00000313961 — 5 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001158772 | 163202792 | 163202916 |
| ENSE00003468643 | 163152550 | 163152716 |
| ENSE00003513173 | 163168258 | 163168368 |
| ENSE00003566635 | 163161915 | 163161976 |
| ENSE00003749411 | 163142299 | 163147503 |
Expression profiles
Bgee: expression breadth ubiquitous, 301 present calls, max score 99.97.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 27.8339 / max 1536.2871, expressed in 1644 samples.
FANTOM5 promoters (7 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 15704 | 21.7169 | 642 |
| 15705 | 5.3053 | 1557 |
| 15691 | 0.4351 | 138 |
| 15689 | 0.1457 | 40 |
| 15692 | 0.1137 | 33 |
| 15693 | 0.0727 | 33 |
| 15690 | 0.0445 | 21 |
Top tissues by expression
305 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| blood vessel layer | UBERON:0004797 | 99.97 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 99.78 | gold quality |
| cardia of stomach | UBERON:0001162 | 99.70 | gold quality |
| urethra | UBERON:0000057 | 99.68 | gold quality |
| pylorus | UBERON:0001166 | 99.61 | gold quality |
| aorta | UBERON:0000947 | 99.60 | gold quality |
| thoracic aorta | UBERON:0001515 | 99.60 | gold quality |
| popliteal artery | UBERON:0002250 | 99.60 | gold quality |
| tibial artery | UBERON:0007610 | 99.59 | gold quality |
| ascending aorta | UBERON:0001496 | 99.58 | gold quality |
| artery | UBERON:0001637 | 99.48 | gold quality |
| visceral pleura | UBERON:0002401 | 99.48 | gold quality |
| seminal vesicle | UBERON:0000998 | 99.45 | gold quality |
| heart right ventricle | UBERON:0002080 | 99.44 | gold quality |
| right coronary artery | UBERON:0001625 | 99.40 | gold quality |
| mucosa of urinary bladder | UBERON:0001259 | 99.34 | gold quality |
| vena cava | UBERON:0004087 | 99.29 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 99.16 | gold quality |
| lower lobe of lung | UBERON:0008949 | 99.05 | gold quality |
| colonic epithelium | UBERON:0000397 | 98.99 | gold quality |
| myocardium | UBERON:0002349 | 98.99 | gold quality |
| renal medulla | UBERON:0000362 | 98.94 | gold quality |
| superficial temporal artery | UBERON:0001614 | 98.91 | gold quality |
| gall bladder | UBERON:0002110 | 98.91 | gold quality |
| parietal pleura | UBERON:0002400 | 98.90 | gold quality |
| pons | UBERON:0000988 | 98.89 | gold quality |
| pleura | UBERON:0000977 | 98.88 | gold quality |
| biceps brachii | UBERON:0001507 | 98.83 | gold quality |
| skin of hip | UBERON:0001554 | 98.81 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 98.74 | gold quality |
Single-cell (SCXA)
Detected in 27 experiment(s), a significant marker in 26.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-135922 | yes | 7580.95 |
| E-HCAD-31 | yes | 7258.73 |
| E-HCAD-23 | yes | 6143.17 |
| E-GEOD-124263 | yes | 5879.88 |
| E-MTAB-6701 | yes | 5558.15 |
| E-CURD-126 | yes | 5423.95 |
| E-HCAD-11 | yes | 5148.03 |
| E-GEOD-134144 | yes | 4889.17 |
| E-CURD-46 | yes | 4421.01 |
| E-MTAB-8381 | yes | 4153.63 |
| E-MTAB-10287 | yes | 4018.76 |
| E-ENAD-20 | yes | 3634.50 |
| E-MTAB-9841 | yes | 3278.77 |
| E-MTAB-8410 | yes | 3204.21 |
| E-MTAB-6308 | yes | 2962.91 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): PPARA, PPARD, PPARG
miRNA regulators (miRDB)
198 targeting RGS5, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-126-5P | 100.00 | 72.71 | 3180 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-4481 | 100.00 | 66.42 | 1669 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-6077 | 99.99 | 68.04 | 2299 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-6759-5P | 99.99 | 66.54 | 785 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-568 | 99.98 | 69.86 | 2084 |
| HSA-MIR-4745-5P | 99.98 | 65.95 | 1028 |
| HSA-MIR-8068 | 99.98 | 73.85 | 2376 |
| HSA-MIR-485-3P | 99.98 | 70.68 | 1585 |
| HSA-MIR-539-3P | 99.98 | 70.74 | 1616 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-6825-5P | 99.96 | 69.81 | 3431 |
Literature-anchored findings (GeneRIF, showing 39)
- There is a contribution of RGS5 to schizophrenia susceptibility. (PMID:14755443)
- Elevated levels of RGS-5 in pericytes are also observed during wound healing and ovulation indicating a strong correlation between RGS-5 expression and active vessel remodeling. (PMID:15459006)
- The loss of RGS5 in the fibrous cap is of particular interest because of its role in vessel development and physiology and loss in fibrous cap of atherosclerosis (PMID:16293795)
- x-ray crystallography of the complex of RGS5 and Galphai(3) proteins with GDP/Mg(2+)/AlF(4)(-) at 3.0 A resolution (PMID:17100651)
- examined function, receptor specificity, and expression of R4 subfamily RGS proteins, RGS2, -3, -4, -5, and -8 via missense mutations introduced (PMID:17220356)
- RGS5 dimerization was confirmed by the analysis of a GFP tagged RGS5 fusion in yeast and with two-hybrid assays (PMID:17762159)
- Rgs5 and Notch3 are expressed in pericytes of developing and injured teeth and have roles along with vascular-derived stem cells during pulp healing (PMID:17939118)
- RGS5 genotypes predicted severity of baseline symptoms in schizophrenia. These data suggest a possible role for multiple RGS proteins in schizophrenia. (PMID:18262772)
- RGS5 is a novel HIF-1-dependent, hypoxia-induced gene that is involved in the induction of endothelial apoptosis. (PMID:19564336)
- Multiple SNPs in combination in RGS5 may confer risk for hypertension. Our results also lend support for the effect of RGS5 SNPs on lipid metabolism (PMID:19863299)
- used transgenic mice show that the cardiac constitutive expression of human Rgs5 protects against cardiac hypertrophy and fibrosis by blocking MEK-ERK1/2 signaling, whereas Rgs5-/- mice displayed the opposite phenotype. (PMID:20643937)
- RGS5 expression level in gastric carcinoma is associated with the differentiation and microvascular density of the tumor, and may be used as an important parameter for determining the prognosis of gastric carcinoma patients. (PMID:21105200)
- Repetitive beta(2)-agonist use may not only lead to reduced bronchoprotection but also to sensitization of excitation-contraction signaling pathways as a result of reduced RGS5 expression (PMID:21278382)
- regulator of G-protein signaling 5 can act as a physiological regulator of calcium sensing by calcium sensing receptor in the parathyroid gland (PMID:21393447)
- Low expression of RGS5 was strongly associated with cancer vasculature invasion and lymph node metastasis in non-small cell lung cancer. (PMID:21780128)
- examined polymorphisms in three genes (ATP1B1, RGS5 and SELE) in relation to hypertension and blood pressure in a cohort of African-Americans (PMID:21881522)
- demonstrate RGS5 in the blood vessels of other cancer models endowed with a proangiogenic environment, such as human melanoma and renal carcinoma xenografts (PMID:22130514)
- Our work identifies a new genetic variant in RGS5 demonstrating additive effect with PDE4D, both implicated in modulation of asthma treatment. (PMID:23193110)
- RGS1 is largely upregulated, whereas RGS2 is downregulated in the majority of solid tumors, whereas RGS5 transcripts are greatly increased in eight subtypes of lymphoma with no reports of downregulation in hematological malignancies (PMID:23464602)
- Over-expression of regulator of G protein signaling 5 promotes tumor metastasis by inducing epithelial-mesenchymal transition in hepatocellular carcinoma cells. (PMID:23868206)
- ectopic expression of R4 subfamily members RGS2, RGS3, RGS4, and RGS5 reduced activated PAR1 wild-type signaling, whereas signaling by the PAR1 AKKAA mutant was minimally affected. (PMID:24297163)
- RGS5 enhanced the cytotoxic effect of radiation in the human lung cancer cells. Our results indicated that RGS5 may be a potential target for cancer therapy. (PMID:25891540)
- The pericyte marker RGS5 may be of future clinical utility for the evaluation of pericytic differentiation in soft tissue tumors. (PMID:26558691)
- Downregulation of RGS5 is an important prerequisite for smooth muscle cell proliferation in vascular injury model. (PMID:26663397)
- The chimeric RGS8 domains containing the first or the second exon part of RGS5 showed strong inhibitory effects similar to that of wild type RGS8, but the chimeric domain with the third exon part of RGS5 lost its activity (PMID:26754208)
- The rs16849802 of RGS5 and haplotype GAA independently increased the risk of essential hypertension in Mongolian patients, and may be used as a risk factor for the prediction of high blood pressure. (PMID:26782409)
- Rgs5 prevents vagal-related bradycardia and atrial tachycardia by negatively regulating the IKA Ach current. (PMID:26961238)
- Results show that RGS5 was highly expressed in the cytoplasm of epithelial ovarian cancer (EOC) cells and in microvascular structures. The expression of RGS5 in EOC was negatively associated with peritoneal metastasis. Hypoxia increased RGS5 expression in ovarian carcinomaderived endothelial cells (ODMECs). Further data indicated that RGS5 is crucial for the occurrence and development of ovarian cancer. (PMID:30365142)
- Expression and role of regulator of G-protein signaling 5 in squamous cell carcinoma of the tongue. (PMID:31049219)
- Down-regulated RGS5 by genetic variants impairs endothelial cell function and contributes to coronary artery disease. (PMID:31605122)
- Human cytomegalovirus promoting endothelial cell proliferation by targeting regulator of G-protein signaling 5 hypermethylation and downregulation. (PMID:32041970)
- RGS5 rs4657251 polymorphism is associated with small vessel occlusion stroke in Taiwan Han Chinese. (PMID:32080025)
- Hepatic Regulator of G Protein Signaling 5 Ameliorates Nonalcoholic Fatty Liver Disease by Suppressing Transforming Growth Factor Beta-Activated Kinase 1-c-Jun-N-Terminal Kinase/p38 Signaling. (PMID:32191345)
- In biopsy specimens of hepatocellular carcinoma, RGS5 and GPC3 expression were useful molecular makers for predicting portal vein invasion. (PMID:32620659)
- Integration of NRP1, RGS5, and FOXM1 expression, and tumour necrosis, as a postoperative prognostic classifier based on molecular subtypes of clear cell renal cell carcinoma. (PMID:34212534)
- RGS5 Attenuates Baseline Activity of ERK1/2 and Promotes Growth Arrest of Vascular Smooth Muscle Cells. (PMID:34359918)
- Implications of regulator of G-protein signaling 5 expression in the pathogenesis of primary and secondary hyperparathyroidism. (PMID:35681135)
- RGS5: a novel role as a hypoxia-responsive protein that suppresses chemokinetic and chemotactic migration in brain pericytes. (PMID:36111549)
- Lnc-RGS5 sponges miR-542-5p to promote FoxM1/VEGFA signaling and breast cancer cell proliferation. (PMID:37594134)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | rgs5a | ENSDARG00000002644 |
| mus_musculus | Rgs5 | ENSMUSG00000026678 |
| rattus_norvegicus | Rgs5 | ENSRNOG00000083506 |
Paralogs (23): RGS11 (ENSG00000076344), RGS1 (ENSG00000090104), RGS17 (ENSG00000091844), AXIN1 (ENSG00000103126), RGS9 (ENSG00000108370), RGS2 (ENSG00000116741), RGS4 (ENSG00000117152), RGSL1 (ENSG00000121446), RGS13 (ENSG00000127074), RGS22 (ENSG00000132554), RGS8 (ENSG00000135824), RGS3 (ENSG00000138835), RGS16 (ENSG00000143333), RGS20 (ENSG00000147509), RGS10 (ENSG00000148908), RGS18 (ENSG00000150681), RGS12 (ENSG00000159788), AXIN2 (ENSG00000168646), RGS14 (ENSG00000169220), RGS19 (ENSG00000171700), RGS6 (ENSG00000182732), RGS7 (ENSG00000182901), RGS21 (ENSG00000253148)
Protein
Protein identifiers
Regulator of G-protein signaling 5 — O15539 (reviewed: O15539)
All UniProt accessions (3): O15539, B1APM2, E9PS96
UniProt curated annotations — full annotation on UniProt →
Function. Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G(i)-alpha and G(o)-alpha, but not to G(s)-alpha.
Subcellular location. Cytoplasm. Membrane Cytoplasm.
Miscellaneous. Acts as an endogenous negative regulator of isoform 1.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| O15539-1 | 1 | yes |
| O15539-2 | 2, RGS5s | |
| O15539-3 | 3 |
RefSeq proteins (12): NP_001182232, NP_001241677, NP_001241678, NP_001401401, NP_001401402, NP_001401403, NP_001401404, NP_001401405, NP_001401406, NP_001401407, NP_001401408, NP_003608* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR016137 | RGS | Domain |
| IPR024066 | RGS_subdom1/3 | Homologous_superfamily |
| IPR034956 | RGS_RGS5 | Domain |
| IPR036305 | RGS_sf | Homologous_superfamily |
| IPR044926 | RGS_subdomain_2 | Homologous_superfamily |
Pfam: PF00615
UniProt features (15 total): helix 11, splice variant 2, chain 1, domain 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2CRP | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O15539-F1 | 86.31 | 0.72 |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-416476 | G alpha (q) signalling events |
| R-HSA-418594 | G alpha (i) signalling events |
MSigDB gene sets: 291 (showing top):
MODULE_52, GOBP_NEGATIVE_REGULATION_OF_SMOOTH_MUSCLE_CELL_PROLIFERATION, BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_DN, MODULE_64, GOBP_MUSCLE_CELL_PROLIFERATION, MODULE_313, PATIL_LIVER_CANCER, MODULE_66, PICCALUGA_ANGIOIMMUNOBLASTIC_LYMPHOMA_UP, CADWELL_ATG16L1_TARGETS_DN, ONKEN_UVEAL_MELANOMA_UP, MODULE_289, SHETH_LIVER_CANCER_VS_TXNIP_LOSS_PAM4, SASSON_RESPONSE_TO_FORSKOLIN_DN, CCTGTGA_MIR513
GO Biological Process (4): G protein-coupled receptor signaling pathway (GO:0007186), regulation of G protein-coupled receptor signaling pathway (GO:0008277), negative regulation of signal transduction (GO:0009968), negative regulation of vascular associated smooth muscle cell proliferation (GO:1904706)
GO Molecular Function (3): GTPase activity (GO:0003924), GTPase activator activity (GO:0005096), protein binding (GO:0005515)
GO Cellular Component (4): cytosol (GO:0005829), plasma membrane (GO:0005886), cytoplasm (GO:0005737), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| GPCR downstream signalling | 2 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| signal transduction | 2 |
| regulation of signal transduction | 2 |
| G protein-coupled receptor activity | 1 |
| G protein-coupled receptor signaling pathway | 1 |
| negative regulation of cell communication | 1 |
| negative regulation of signaling | 1 |
| negative regulation of response to stimulus | 1 |
| negative regulation of smooth muscle cell proliferation | 1 |
| regulation of vascular associated smooth muscle cell proliferation | 1 |
| vascular associated smooth muscle cell proliferation | 1 |
| ribonucleoside triphosphate phosphatase activity | 1 |
| GTPase activity | 1 |
| enzyme activator activity | 1 |
| GTPase regulator activity | 1 |
| binding | 1 |
| cytoplasm | 1 |
| membrane | 1 |
| cell periphery | 1 |
| intracellular anatomical structure | 1 |
Protein interactions and networks
STRING
1474 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| RGS5 | GNB5 | O14775 | 872 |
| RGS5 | SUCLG2 | Q96I99 | 846 |
| RGS5 | GNAQ | P50148 | 786 |
| RGS5 | ARHGEF11 | O15085 | 779 |
| RGS5 | ARHGEF1 | Q92888 | 775 |
| RGS5 | RGSL1 | A5PLK6 | 764 |
| RGS5 | GRK2 | P25098 | 757 |
| RGS5 | MCF2 | P10911 | 700 |
| RGS5 | GNA13 | Q14344 | 692 |
| RGS5 | RGS7BP | Q6MZT1 | 679 |
| RGS5 | PLEK | P08567 | 670 |
| RGS5 | ARHGEF25 | Q86VW2 | 666 |
| RGS5 | SUCLG1 | P53597 | 664 |
| RGS5 | AKAP10 | O43572 | 647 |
| RGS5 | PLEK2 | Q9NYT0 | 643 |
IntAct
7 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| RGS5 | MEOX2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ADO | RGS5 | psi-mi:“MI:0945”(oxidoreductase activity electron transfer reaction) | 0.440 |
| PCNA | RGS5 | psi-mi:“MI:0915”(physical association) | 0.370 |
| RGS5 | CST8 | psi-mi:“MI:0914”(association) | 0.350 |
| RGS5 | MEOX2 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (16): RGS5 (Two-hybrid), GNAI3 (Reconstituted Complex), GNAI2 (Reconstituted Complex), GNAO1 (Reconstituted Complex), OMP (Affinity Capture-MS), GNAI1 (Affinity Capture-Western), GNAI2 (Affinity Capture-Western), GNAI3 (Affinity Capture-Western), GNAO1 (Affinity Capture-Western), GNAQ (Affinity Capture-Western), RPP25L (Affinity Capture-MS), CST8 (Affinity Capture-MS), RGS5 (Cross-Linking-MS (XL-MS)), RPL37A (Cross-Linking-MS (XL-MS)), APP (Reconstituted Complex)
ESM2 similar proteins: A1A643, O08849, O08850, O14921, O15539, O35119, O43665, O46470, O54829, P34295, P41220, P49758, P49800, P49802, P49803, P49806, P49808, P49809, P79100, P97844, Q08116, Q09777, Q0P5H5, Q10955, Q2KHW7, Q2M5E4, Q3S853, Q3T0T8, Q4L0E8, Q5M8L6, Q62240, Q6DGI0, Q6RG78, Q864Z2, Q8K443, Q8VYB9, Q99PG4, Q9CQE5, Q9FLY5, Q9JHX0
Diamond homologs: A1A643, F1S668, O08773, O08774, O08849, O08850, O08899, O14921, O14924, O15169, O15492, O15539, O35625, O42400, O43566, O43665, O46469, O46470, O46471, O54828, O54829, O70239, O70240, O70521, O75916, O76081, O88566, O94810, P34295, P41220, P49758, P49795, P49796, P49797, P49798, P49799, P49800, P49802, P49803, P49804
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
26 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 22 |
| Likely benign | 0 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
920 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:163152549:CCT:C | donor_gain | 1.0000 |
| 1:163152556:AGGAG:A | donor_gain | 1.0000 |
| 1:163152563:T:TA | donor_gain | 1.0000 |
| 1:163152596:G:A | donor_gain | 1.0000 |
| 1:163152712:TCCAT:T | acceptor_gain | 1.0000 |
| 1:163152713:CCAT:C | acceptor_gain | 1.0000 |
| 1:163152713:CCATC:C | acceptor_gain | 1.0000 |
| 1:163152714:CAT:C | acceptor_gain | 1.0000 |
| 1:163152714:CATC:C | acceptor_gain | 1.0000 |
| 1:163152715:AT:A | acceptor_gain | 1.0000 |
| 1:163152717:C:CC | acceptor_gain | 1.0000 |
| 1:163152717:CTG:C | acceptor_loss | 1.0000 |
| 1:163152718:T:C | acceptor_loss | 1.0000 |
| 1:163161908:AACTT:A | donor_loss | 1.0000 |
| 1:163161909:ACTTA:A | donor_loss | 1.0000 |
| 1:163161910:CTTAC:C | donor_loss | 1.0000 |
| 1:163161911:TTAC:T | donor_loss | 1.0000 |
| 1:163161912:T:TG | donor_loss | 1.0000 |
| 1:163161913:A:AC | donor_gain | 1.0000 |
| 1:163161914:C:CC | donor_gain | 1.0000 |
| 1:163161914:C:CT | donor_loss | 1.0000 |
| 1:163161914:CA:C | donor_gain | 1.0000 |
| 1:163161914:CAG:C | donor_gain | 1.0000 |
| 1:163161984:A:T | acceptor_gain | 1.0000 |
| 1:163161988:A:AC | acceptor_gain | 1.0000 |
| 1:163168251:GACTC:G | donor_loss | 1.0000 |
| 1:163168252:ACT:A | donor_loss | 1.0000 |
| 1:163168253:CTC:C | donor_loss | 1.0000 |
| 1:163168254:TCACT:T | donor_loss | 1.0000 |
| 1:163168255:CACTT:C | donor_loss | 1.0000 |
AlphaMissense
1208 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:163152574:G:C | F120L | 0.999 |
| 1:163152574:G:T | F120L | 0.999 |
| 1:163152576:A:G | F120L | 0.999 |
| 1:163152656:A:G | F93S | 0.999 |
| 1:163152691:G:C | F81L | 0.999 |
| 1:163152691:G:T | F81L | 0.999 |
| 1:163152693:A:G | F81L | 0.999 |
| 1:163147383:G:T | R169S | 0.998 |
| 1:163152655:G:C | F93L | 0.998 |
| 1:163152655:G:T | F93L | 0.998 |
| 1:163152657:A:G | F93L | 0.998 |
| 1:163152676:G:C | F86L | 0.998 |
| 1:163152676:G:T | F86L | 0.998 |
| 1:163152678:A:G | F86L | 0.998 |
| 1:163152689:A:G | L82P | 0.998 |
| 1:163147378:A:C | F170L | 0.997 |
| 1:163147378:A:T | F170L | 0.997 |
| 1:163147379:A:G | F170S | 0.997 |
| 1:163147380:A:G | F170L | 0.997 |
| 1:163147406:A:G | L161P | 0.997 |
| 1:163147427:G:T | A154D | 0.997 |
| 1:163147498:A:C | N130K | 0.997 |
| 1:163147498:A:T | N130K | 0.997 |
| 1:163147382:C:G | R169P | 0.996 |
| 1:163152597:C:G | A113P | 0.996 |
| 1:163152643:A:C | C97W | 0.996 |
| 1:163152668:T:A | E89V | 0.996 |
| 1:163152673:A:C | S87R | 0.996 |
| 1:163152673:A:T | S87R | 0.996 |
| 1:163152675:T:G | S87R | 0.996 |
dbSNP variants (sampled 300 via entrez): RS1000008497 (1:163256173 C>T), RS1000018021 (1:163170025 A>T), RS1000032625 (1:163184705 G>A), RS1000037315 (1:163273666 G>C), RS1000048839 (1:163307385 T>G), RS1000124298 (1:163263100 A>G), RS1000153136 (1:163256881 A>T), RS1000161457 (1:163282194 C>T), RS1000163318 (1:163270503 G>C), RS1000169271 (1:163219982 T>C), RS1000173011 (1:163322079 G>A), RS1000189584 (1:163148561 C>T), RS1000252574 (1:163236714 A>C), RS1000252697 (1:163229725 C>A), RS1000265315 (1:163226223 G>A)
Disease associations
OMIM: gene MIM:603276 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| essential hypertension, genetic | No Known Disease Relationship | Unknown |
Mondo (1): essential hypertension, genetic (MONDO:0007781)
Orphanet (0):
HPO phenotypes
4 total (4 of 4 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0001426 | Non-Mendelian inheritance |
| HP:0004421 | Elevated systolic blood pressure |
| HP:0004972 | Elevated mean arterial pressure |
| HP:0005117 | Elevated diastolic blood pressure |
GWAS associations
6 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002156_1 | Response to mTOR inhibitor (rapamycin) | 4.000000e-06 |
| GCST002207_6 | Liver enzyme levels (alanine transaminase) | 4.000000e-06 |
| GCST002759_28 | Motion sickness | 3.000000e-09 |
| GCST002831_3 | Lead levels in blood | 3.000000e-06 |
| GCST008163_553 | Height | 4.000000e-08 |
| GCST012007_4 | Hypoalbuminemia | 9.000000e-06 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005417 | response to mTOR inhibitor |
| EFO:0006928 | motion sickness |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
1 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs1056515 | Efficacy | 3 | bevacizumab;fluorouracil;irinotecan;leucovorin | Colorectal Neoplasms |
PharmGKB variants
3 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs1056515 | RGS5 | 3 | 2.00 | 1 | bevacizumab;fluorouracil;irinotecan;leucovorin |
| rs2661280 | RGS5 | 0.00 | 0 | ||
| rs11580141 | RGS5 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: other protein — R4 family
CTD chemical–gene interactions
56 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression, decreases expression | 6 |
| methylmercuric chloride | decreases expression | 3 |
| trichostatin A | affects cotreatment, increases expression | 3 |
| Benzo(a)pyrene | decreases expression, increases methylation, affects methylation | 3 |
| Silicon Dioxide | decreases expression | 3 |
| Tretinoin | decreases expression, increases expression | 3 |
| mercuric bromide | increases expression, affects cotreatment | 2 |
| entinostat | increases expression, affects cotreatment | 2 |
| Vorinostat | affects cotreatment, increases expression | 2 |
| Panobinostat | affects cotreatment, increases expression | 2 |
| Estradiol | decreases expression, affects cotreatment | 2 |
| Nickel | decreases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Okadaic Acid | affects expression, decreases expression | 2 |
| Esketamine | decreases expression | 1 |
| bufotalin | increases expression | 1 |
| methyleugenol | decreases expression | 1 |
| triphenyl phosphate | decreases expression | 1 |
| bisphenol A | affects methylation | 1 |
| deoxynivalenol | decreases expression | 1 |
| arsenite | affects binding, increases reaction | 1 |
| cobaltous chloride | decreases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| manganese chloride | decreases expression | 1 |
| pentanal | decreases expression | 1 |
| avobenzone | decreases expression | 1 |
| monomethylarsonous acid | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| 2,2’,4,4’,5-brominated diphenyl ether | decreases expression | 1 |
| Grape Seed Proanthocyanidins | affects cotreatment, decreases expression | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Associated diseases: essential hypertension, genetic
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): essential hypertension, genetic