RGS5

gene
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Summary

RGS5 (regulator of G protein signaling 5, HGNC:10001) is a protein-coding gene on chromosome 1q23.3, encoding Regulator of G-protein signaling 5 (O15539). Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form.

This locus represents naturally occurring readthrough transcription between the neighboring LOC127814295 (uncharacterized LOC127814295) and RGS5 (regulator of G-protein signaling 5) genes on chromosome 1. Some variants of the readthrough transcript encode novel proteins with unique N-termini.

Source: NCBI Gene 8490 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): essential hypertension, genetic (No Known Disease Relationship, GenCC)
  • GWAS associations: 6
  • Clinical variants (ClinVar): 26 total
  • Phenotypes (HPO): 4
  • MANE Select transcript: NM_003617

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:10001
Approved symbolRGS5
Nameregulator of G protein signaling 5
Location1q23.3
Locus typegene with protein product
StatusApproved
Ensembl geneENSG00000143248
Ensembl biotypeprotein_coding
OMIM603276
Entrez8490

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 7 protein_coding, 5 protein_coding_CDS_not_defined, 1 retained_intron

ENST00000313961, ENST00000367903, ENST00000428971, ENST00000469495, ENST00000525894, ENST00000527988, ENST00000530241, ENST00000530507, ENST00000531476, ENST00000531954, ENST00000534288, ENST00000618415, ENST00000950224

RefSeq mRNA: 12 — MANE Select: NM_003617 NM_001195303, NM_001254748, NM_001254749, NM_001414472, NM_001414473, NM_001414474, NM_001414475, NM_001414476, NM_001414477, NM_001414478, NM_001414479, NM_003617

CCDS: CCDS1244, CCDS55652, CCDS58041

Canonical transcript exons

ENST00000313961 — 5 exons

ExonStartEnd
ENSE00001158772163202792163202916
ENSE00003468643163152550163152716
ENSE00003513173163168258163168368
ENSE00003566635163161915163161976
ENSE00003749411163142299163147503

Expression profiles

Bgee: expression breadth ubiquitous, 301 present calls, max score 99.97.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 27.8339 / max 1536.2871, expressed in 1644 samples.

FANTOM5 promoters (7 alternative TSS)

Promoter IDTPM avgSamples expressed
1570421.7169642
157055.30531557
156910.4351138
156890.145740
156920.113733
156930.072733
156900.044521

Top tissues by expression

305 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
blood vessel layerUBERON:000479799.97gold quality
descending thoracic aortaUBERON:000234599.78gold quality
cardia of stomachUBERON:000116299.70gold quality
urethraUBERON:000005799.68gold quality
pylorusUBERON:000116699.61gold quality
aortaUBERON:000094799.60gold quality
thoracic aortaUBERON:000151599.60gold quality
popliteal arteryUBERON:000225099.60gold quality
tibial arteryUBERON:000761099.59gold quality
ascending aortaUBERON:000149699.58gold quality
arteryUBERON:000163799.48gold quality
visceral pleuraUBERON:000240199.48gold quality
seminal vesicleUBERON:000099899.45gold quality
heart right ventricleUBERON:000208099.44gold quality
right coronary arteryUBERON:000162599.40gold quality
mucosa of urinary bladderUBERON:000125999.34gold quality
vena cavaUBERON:000408799.29gold quality
left ventricle myocardiumUBERON:000656699.16gold quality
lower lobe of lungUBERON:000894999.05gold quality
colonic epitheliumUBERON:000039798.99gold quality
myocardiumUBERON:000234998.99gold quality
renal medullaUBERON:000036298.94gold quality
superficial temporal arteryUBERON:000161498.91gold quality
gall bladderUBERON:000211098.91gold quality
parietal pleuraUBERON:000240098.90gold quality
ponsUBERON:000098898.89gold quality
pleuraUBERON:000097798.88gold quality
biceps brachiiUBERON:000150798.83gold quality
skin of hipUBERON:000155498.81gold quality
subthalamic nucleusUBERON:000190698.74gold quality

Single-cell (SCXA)

Detected in 27 experiment(s), a significant marker in 26.

ExperimentMarker?Max mean expression
E-GEOD-135922yes7580.95
E-HCAD-31yes7258.73
E-HCAD-23yes6143.17
E-GEOD-124263yes5879.88
E-MTAB-6701yes5558.15
E-CURD-126yes5423.95
E-HCAD-11yes5148.03
E-GEOD-134144yes4889.17
E-CURD-46yes4421.01
E-MTAB-8381yes4153.63
E-MTAB-10287yes4018.76
E-ENAD-20yes3634.50
E-MTAB-9841yes3278.77
E-MTAB-8410yes3204.21
E-MTAB-6308yes2962.91

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): PPARA, PPARD, PPARG

miRNA regulators (miRDB)

198 targeting RGS5, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-5692A100.0074.406850
HSA-MIR-6867-5P100.0082.213464
HSA-MIR-5011-5P100.0083.465820
HSA-MIR-126-5P100.0072.713180
HSA-MIR-190A-3P100.0080.355520
HSA-MIR-4481100.0066.421669
HSA-MIR-3163100.0077.238605
HSA-MIR-5692B100.0071.322622
HSA-MIR-5692C100.0071.322622
HSA-MIR-6833-3P100.0070.633197
HSA-MIR-4768-5P100.0069.492861
HSA-MIR-1277-5P100.0073.955056
HSA-MIR-4747-5P100.0067.902681
HSA-MIR-5196-5P100.0067.982761
HSA-MIR-4795-3P100.0074.624024
HSA-MIR-4668-3P100.0068.742635
HSA-MIR-607799.9968.042299
HSA-MIR-548C-3P99.9974.017587
HSA-MIR-511-3P99.9968.851467
HSA-MIR-6759-5P99.9966.54785
HSA-MIR-428299.9975.366408
HSA-MIR-477599.9875.006394
HSA-MIR-569699.9872.364487
HSA-MIR-56899.9869.862084
HSA-MIR-4745-5P99.9865.951028
HSA-MIR-806899.9873.852376
HSA-MIR-485-3P99.9870.681585
HSA-MIR-539-3P99.9870.741616
HSA-MIR-590-3P99.9674.346478
HSA-MIR-6825-5P99.9669.813431

Literature-anchored findings (GeneRIF, showing 39)

  • There is a contribution of RGS5 to schizophrenia susceptibility. (PMID:14755443)
  • Elevated levels of RGS-5 in pericytes are also observed during wound healing and ovulation indicating a strong correlation between RGS-5 expression and active vessel remodeling. (PMID:15459006)
  • The loss of RGS5 in the fibrous cap is of particular interest because of its role in vessel development and physiology and loss in fibrous cap of atherosclerosis (PMID:16293795)
  • x-ray crystallography of the complex of RGS5 and Galphai(3) proteins with GDP/Mg(2+)/AlF(4)(-) at 3.0 A resolution (PMID:17100651)
  • examined function, receptor specificity, and expression of R4 subfamily RGS proteins, RGS2, -3, -4, -5, and -8 via missense mutations introduced (PMID:17220356)
  • RGS5 dimerization was confirmed by the analysis of a GFP tagged RGS5 fusion in yeast and with two-hybrid assays (PMID:17762159)
  • Rgs5 and Notch3 are expressed in pericytes of developing and injured teeth and have roles along with vascular-derived stem cells during pulp healing (PMID:17939118)
  • RGS5 genotypes predicted severity of baseline symptoms in schizophrenia. These data suggest a possible role for multiple RGS proteins in schizophrenia. (PMID:18262772)
  • RGS5 is a novel HIF-1-dependent, hypoxia-induced gene that is involved in the induction of endothelial apoptosis. (PMID:19564336)
  • Multiple SNPs in combination in RGS5 may confer risk for hypertension. Our results also lend support for the effect of RGS5 SNPs on lipid metabolism (PMID:19863299)
  • used transgenic mice show that the cardiac constitutive expression of human Rgs5 protects against cardiac hypertrophy and fibrosis by blocking MEK-ERK1/2 signaling, whereas Rgs5-/- mice displayed the opposite phenotype. (PMID:20643937)
  • RGS5 expression level in gastric carcinoma is associated with the differentiation and microvascular density of the tumor, and may be used as an important parameter for determining the prognosis of gastric carcinoma patients. (PMID:21105200)
  • Repetitive beta(2)-agonist use may not only lead to reduced bronchoprotection but also to sensitization of excitation-contraction signaling pathways as a result of reduced RGS5 expression (PMID:21278382)
  • regulator of G-protein signaling 5 can act as a physiological regulator of calcium sensing by calcium sensing receptor in the parathyroid gland (PMID:21393447)
  • Low expression of RGS5 was strongly associated with cancer vasculature invasion and lymph node metastasis in non-small cell lung cancer. (PMID:21780128)
  • examined polymorphisms in three genes (ATP1B1, RGS5 and SELE) in relation to hypertension and blood pressure in a cohort of African-Americans (PMID:21881522)
  • demonstrate RGS5 in the blood vessels of other cancer models endowed with a proangiogenic environment, such as human melanoma and renal carcinoma xenografts (PMID:22130514)
  • Our work identifies a new genetic variant in RGS5 demonstrating additive effect with PDE4D, both implicated in modulation of asthma treatment. (PMID:23193110)
  • RGS1 is largely upregulated, whereas RGS2 is downregulated in the majority of solid tumors, whereas RGS5 transcripts are greatly increased in eight subtypes of lymphoma with no reports of downregulation in hematological malignancies (PMID:23464602)
  • Over-expression of regulator of G protein signaling 5 promotes tumor metastasis by inducing epithelial-mesenchymal transition in hepatocellular carcinoma cells. (PMID:23868206)
  • ectopic expression of R4 subfamily members RGS2, RGS3, RGS4, and RGS5 reduced activated PAR1 wild-type signaling, whereas signaling by the PAR1 AKKAA mutant was minimally affected. (PMID:24297163)
  • RGS5 enhanced the cytotoxic effect of radiation in the human lung cancer cells. Our results indicated that RGS5 may be a potential target for cancer therapy. (PMID:25891540)
  • The pericyte marker RGS5 may be of future clinical utility for the evaluation of pericytic differentiation in soft tissue tumors. (PMID:26558691)
  • Downregulation of RGS5 is an important prerequisite for smooth muscle cell proliferation in vascular injury model. (PMID:26663397)
  • The chimeric RGS8 domains containing the first or the second exon part of RGS5 showed strong inhibitory effects similar to that of wild type RGS8, but the chimeric domain with the third exon part of RGS5 lost its activity (PMID:26754208)
  • The rs16849802 of RGS5 and haplotype GAA independently increased the risk of essential hypertension in Mongolian patients, and may be used as a risk factor for the prediction of high blood pressure. (PMID:26782409)
  • Rgs5 prevents vagal-related bradycardia and atrial tachycardia by negatively regulating the IKA Ach current. (PMID:26961238)
  • Results show that RGS5 was highly expressed in the cytoplasm of epithelial ovarian cancer (EOC) cells and in microvascular structures. The expression of RGS5 in EOC was negatively associated with peritoneal metastasis. Hypoxia increased RGS5 expression in ovarian carcinomaderived endothelial cells (ODMECs). Further data indicated that RGS5 is crucial for the occurrence and development of ovarian cancer. (PMID:30365142)
  • Expression and role of regulator of G-protein signaling 5 in squamous cell carcinoma of the tongue. (PMID:31049219)
  • Down-regulated RGS5 by genetic variants impairs endothelial cell function and contributes to coronary artery disease. (PMID:31605122)
  • Human cytomegalovirus promoting endothelial cell proliferation by targeting regulator of G-protein signaling 5 hypermethylation and downregulation. (PMID:32041970)
  • RGS5 rs4657251 polymorphism is associated with small vessel occlusion stroke in Taiwan Han Chinese. (PMID:32080025)
  • Hepatic Regulator of G Protein Signaling 5 Ameliorates Nonalcoholic Fatty Liver Disease by Suppressing Transforming Growth Factor Beta-Activated Kinase 1-c-Jun-N-Terminal Kinase/p38 Signaling. (PMID:32191345)
  • In biopsy specimens of hepatocellular carcinoma, RGS5 and GPC3 expression were useful molecular makers for predicting portal vein invasion. (PMID:32620659)
  • Integration of NRP1, RGS5, and FOXM1 expression, and tumour necrosis, as a postoperative prognostic classifier based on molecular subtypes of clear cell renal cell carcinoma. (PMID:34212534)
  • RGS5 Attenuates Baseline Activity of ERK1/2 and Promotes Growth Arrest of Vascular Smooth Muscle Cells. (PMID:34359918)
  • Implications of regulator of G-protein signaling 5 expression in the pathogenesis of primary and secondary hyperparathyroidism. (PMID:35681135)
  • RGS5: a novel role as a hypoxia-responsive protein that suppresses chemokinetic and chemotactic migration in brain pericytes. (PMID:36111549)
  • Lnc-RGS5 sponges miR-542-5p to promote FoxM1/VEGFA signaling and breast cancer cell proliferation. (PMID:37594134)

Cross-species orthologs

3 orthologs

OrganismSymbolGene ID
danio_reriorgs5aENSDARG00000002644
mus_musculusRgs5ENSMUSG00000026678
rattus_norvegicusRgs5ENSRNOG00000083506

Paralogs (23): RGS11 (ENSG00000076344), RGS1 (ENSG00000090104), RGS17 (ENSG00000091844), AXIN1 (ENSG00000103126), RGS9 (ENSG00000108370), RGS2 (ENSG00000116741), RGS4 (ENSG00000117152), RGSL1 (ENSG00000121446), RGS13 (ENSG00000127074), RGS22 (ENSG00000132554), RGS8 (ENSG00000135824), RGS3 (ENSG00000138835), RGS16 (ENSG00000143333), RGS20 (ENSG00000147509), RGS10 (ENSG00000148908), RGS18 (ENSG00000150681), RGS12 (ENSG00000159788), AXIN2 (ENSG00000168646), RGS14 (ENSG00000169220), RGS19 (ENSG00000171700), RGS6 (ENSG00000182732), RGS7 (ENSG00000182901), RGS21 (ENSG00000253148)

Protein

Protein identifiers

Regulator of G-protein signaling 5O15539 (reviewed: O15539)

All UniProt accessions (3): O15539, B1APM2, E9PS96

UniProt curated annotations — full annotation on UniProt →

Function. Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G(i)-alpha and G(o)-alpha, but not to G(s)-alpha.

Subcellular location. Cytoplasm. Membrane Cytoplasm.

Miscellaneous. Acts as an endogenous negative regulator of isoform 1.

Isoforms (3)

UniProt IDNamesCanonical?
O15539-11yes
O15539-22, RGS5s
O15539-33

RefSeq proteins (12): NP_001182232, NP_001241677, NP_001241678, NP_001401401, NP_001401402, NP_001401403, NP_001401404, NP_001401405, NP_001401406, NP_001401407, NP_001401408, NP_003608* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR016137RGSDomain
IPR024066RGS_subdom1/3Homologous_superfamily
IPR034956RGS_RGS5Domain
IPR036305RGS_sfHomologous_superfamily
IPR044926RGS_subdomain_2Homologous_superfamily

Pfam: PF00615

UniProt features (15 total): helix 11, splice variant 2, chain 1, domain 1

Structure

Experimental structures (PDB)

1 structures.

PDBMethodResolution (Å)
2CRPSOLUTION NMR

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-O15539-F186.310.72

Function

Pathways and Gene Ontology

Reactome pathways

2 pathways

IDPathway
R-HSA-416476G alpha (q) signalling events
R-HSA-418594G alpha (i) signalling events

MSigDB gene sets: 291 (showing top): MODULE_52, GOBP_NEGATIVE_REGULATION_OF_SMOOTH_MUSCLE_CELL_PROLIFERATION, BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_DN, MODULE_64, GOBP_MUSCLE_CELL_PROLIFERATION, MODULE_313, PATIL_LIVER_CANCER, MODULE_66, PICCALUGA_ANGIOIMMUNOBLASTIC_LYMPHOMA_UP, CADWELL_ATG16L1_TARGETS_DN, ONKEN_UVEAL_MELANOMA_UP, MODULE_289, SHETH_LIVER_CANCER_VS_TXNIP_LOSS_PAM4, SASSON_RESPONSE_TO_FORSKOLIN_DN, CCTGTGA_MIR513

GO Biological Process (4): G protein-coupled receptor signaling pathway (GO:0007186), regulation of G protein-coupled receptor signaling pathway (GO:0008277), negative regulation of signal transduction (GO:0009968), negative regulation of vascular associated smooth muscle cell proliferation (GO:1904706)

GO Molecular Function (3): GTPase activity (GO:0003924), GTPase activator activity (GO:0005096), protein binding (GO:0005515)

GO Cellular Component (4): cytosol (GO:0005829), plasma membrane (GO:0005886), cytoplasm (GO:0005737), membrane (GO:0016020)

Reactome top-level categories

Rollup of top-1 pathways:

CategoryPathways
GPCR downstream signalling2

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure3
signal transduction2
regulation of signal transduction2
G protein-coupled receptor activity1
G protein-coupled receptor signaling pathway1
negative regulation of cell communication1
negative regulation of signaling1
negative regulation of response to stimulus1
negative regulation of smooth muscle cell proliferation1
regulation of vascular associated smooth muscle cell proliferation1
vascular associated smooth muscle cell proliferation1
ribonucleoside triphosphate phosphatase activity1
GTPase activity1
enzyme activator activity1
GTPase regulator activity1
binding1
cytoplasm1
membrane1
cell periphery1
intracellular anatomical structure1

Protein interactions and networks

STRING

1474 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
RGS5GNB5O14775872
RGS5SUCLG2Q96I99846
RGS5GNAQP50148786
RGS5ARHGEF11O15085779
RGS5ARHGEF1Q92888775
RGS5RGSL1A5PLK6764
RGS5GRK2P25098757
RGS5MCF2P10911700
RGS5GNA13Q14344692
RGS5RGS7BPQ6MZT1679
RGS5PLEKP08567670
RGS5ARHGEF25Q86VW2666
RGS5SUCLG1P53597664
RGS5AKAP10O43572647
RGS5PLEK2Q9NYT0643

IntAct

7 interactions, top by confidence:

ABTypeScore
RGS5MEOX2psi-mi:“MI:0915”(physical association)0.560
ADORGS5psi-mi:“MI:0945”(oxidoreductase activity electron transfer reaction)0.440
PCNARGS5psi-mi:“MI:0915”(physical association)0.370
RGS5CST8psi-mi:“MI:0914”(association)0.350
RGS5MEOX2psi-mi:“MI:0915”(physical association)0.000

BioGRID (16): RGS5 (Two-hybrid), GNAI3 (Reconstituted Complex), GNAI2 (Reconstituted Complex), GNAO1 (Reconstituted Complex), OMP (Affinity Capture-MS), GNAI1 (Affinity Capture-Western), GNAI2 (Affinity Capture-Western), GNAI3 (Affinity Capture-Western), GNAO1 (Affinity Capture-Western), GNAQ (Affinity Capture-Western), RPP25L (Affinity Capture-MS), CST8 (Affinity Capture-MS), RGS5 (Cross-Linking-MS (XL-MS)), RPL37A (Cross-Linking-MS (XL-MS)), APP (Reconstituted Complex)

ESM2 similar proteins: A1A643, O08849, O08850, O14921, O15539, O35119, O43665, O46470, O54829, P34295, P41220, P49758, P49800, P49802, P49803, P49806, P49808, P49809, P79100, P97844, Q08116, Q09777, Q0P5H5, Q10955, Q2KHW7, Q2M5E4, Q3S853, Q3T0T8, Q4L0E8, Q5M8L6, Q62240, Q6DGI0, Q6RG78, Q864Z2, Q8K443, Q8VYB9, Q99PG4, Q9CQE5, Q9FLY5, Q9JHX0

Diamond homologs: A1A643, F1S668, O08773, O08774, O08849, O08850, O08899, O14921, O14924, O15169, O15492, O15539, O35625, O42400, O43566, O43665, O46469, O46470, O46471, O54828, O54829, O70239, O70240, O70521, O75916, O76081, O88566, O94810, P34295, P41220, P49758, P49795, P49796, P49797, P49798, P49799, P49800, P49802, P49803, P49804

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

26 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance22
Likely benign0
Benign0

Top pathogenic / likely-pathogenic (0)

SpliceAI

920 predictions. Top by Δscore:

VariantEffectΔscore
1:163152549:CCT:Cdonor_gain1.0000
1:163152556:AGGAG:Adonor_gain1.0000
1:163152563:T:TAdonor_gain1.0000
1:163152596:G:Adonor_gain1.0000
1:163152712:TCCAT:Tacceptor_gain1.0000
1:163152713:CCAT:Cacceptor_gain1.0000
1:163152713:CCATC:Cacceptor_gain1.0000
1:163152714:CAT:Cacceptor_gain1.0000
1:163152714:CATC:Cacceptor_gain1.0000
1:163152715:AT:Aacceptor_gain1.0000
1:163152717:C:CCacceptor_gain1.0000
1:163152717:CTG:Cacceptor_loss1.0000
1:163152718:T:Cacceptor_loss1.0000
1:163161908:AACTT:Adonor_loss1.0000
1:163161909:ACTTA:Adonor_loss1.0000
1:163161910:CTTAC:Cdonor_loss1.0000
1:163161911:TTAC:Tdonor_loss1.0000
1:163161912:T:TGdonor_loss1.0000
1:163161913:A:ACdonor_gain1.0000
1:163161914:C:CCdonor_gain1.0000
1:163161914:C:CTdonor_loss1.0000
1:163161914:CA:Cdonor_gain1.0000
1:163161914:CAG:Cdonor_gain1.0000
1:163161984:A:Tacceptor_gain1.0000
1:163161988:A:ACacceptor_gain1.0000
1:163168251:GACTC:Gdonor_loss1.0000
1:163168252:ACT:Adonor_loss1.0000
1:163168253:CTC:Cdonor_loss1.0000
1:163168254:TCACT:Tdonor_loss1.0000
1:163168255:CACTT:Cdonor_loss1.0000

AlphaMissense

1208 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
1:163152574:G:CF120L0.999
1:163152574:G:TF120L0.999
1:163152576:A:GF120L0.999
1:163152656:A:GF93S0.999
1:163152691:G:CF81L0.999
1:163152691:G:TF81L0.999
1:163152693:A:GF81L0.999
1:163147383:G:TR169S0.998
1:163152655:G:CF93L0.998
1:163152655:G:TF93L0.998
1:163152657:A:GF93L0.998
1:163152676:G:CF86L0.998
1:163152676:G:TF86L0.998
1:163152678:A:GF86L0.998
1:163152689:A:GL82P0.998
1:163147378:A:CF170L0.997
1:163147378:A:TF170L0.997
1:163147379:A:GF170S0.997
1:163147380:A:GF170L0.997
1:163147406:A:GL161P0.997
1:163147427:G:TA154D0.997
1:163147498:A:CN130K0.997
1:163147498:A:TN130K0.997
1:163147382:C:GR169P0.996
1:163152597:C:GA113P0.996
1:163152643:A:CC97W0.996
1:163152668:T:AE89V0.996
1:163152673:A:CS87R0.996
1:163152673:A:TS87R0.996
1:163152675:T:GS87R0.996

dbSNP variants (sampled 300 via entrez): RS1000008497 (1:163256173 C>T), RS1000018021 (1:163170025 A>T), RS1000032625 (1:163184705 G>A), RS1000037315 (1:163273666 G>C), RS1000048839 (1:163307385 T>G), RS1000124298 (1:163263100 A>G), RS1000153136 (1:163256881 A>T), RS1000161457 (1:163282194 C>T), RS1000163318 (1:163270503 G>C), RS1000169271 (1:163219982 T>C), RS1000173011 (1:163322079 G>A), RS1000189584 (1:163148561 C>T), RS1000252574 (1:163236714 A>C), RS1000252697 (1:163229725 C>A), RS1000265315 (1:163226223 G>A)

Disease associations

OMIM: gene MIM:603276 | disease phenotypes:

GenCC curated gene-disease

DiseaseClassificationInheritance
essential hypertension, geneticNo Known Disease RelationshipUnknown

Mondo (1): essential hypertension, genetic (MONDO:0007781)

Orphanet (0):

HPO phenotypes

4 total (4 of 4 shown, HPO-id order):

HPOTerm
HP:0001426Non-Mendelian inheritance
HP:0004421Elevated systolic blood pressure
HP:0004972Elevated mean arterial pressure
HP:0005117Elevated diastolic blood pressure

GWAS associations

6 associations (top):

StudyTraitp-value
GCST002156_1Response to mTOR inhibitor (rapamycin)4.000000e-06
GCST002207_6Liver enzyme levels (alanine transaminase)4.000000e-06
GCST002759_28Motion sickness3.000000e-09
GCST002831_3Lead levels in blood3.000000e-06
GCST008163_553Height4.000000e-08
GCST012007_4Hypoalbuminemia9.000000e-06

EFO canonical traits (2, from GWAS)

EFO IDTrait name
EFO:0005417response to mTOR inhibitor
EFO:0006928motion sickness

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

PharmGKB clinical annotations

1 annotations.

VariantTypeLevelDrugsPhenotypes
rs1056515Efficacy3bevacizumab;fluorouracil;irinotecan;leucovorinColorectal Neoplasms

PharmGKB variants

3 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs1056515RGS532.001bevacizumab;fluorouracil;irinotecan;leucovorin
rs2661280RGS50.000
rs11580141RGS50.000

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: other protein — R4 family

CTD chemical–gene interactions

56 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Valproic Acidaffects cotreatment, increases expression, decreases expression6
methylmercuric chloridedecreases expression3
trichostatin Aaffects cotreatment, increases expression3
Benzo(a)pyrenedecreases expression, increases methylation, affects methylation3
Silicon Dioxidedecreases expression3
Tretinoindecreases expression, increases expression3
mercuric bromideincreases expression, affects cotreatment2
entinostatincreases expression, affects cotreatment2
Vorinostataffects cotreatment, increases expression2
Panobinostataffects cotreatment, increases expression2
Estradioldecreases expression, affects cotreatment2
Nickeldecreases expression2
Phenylmercuric Acetateaffects cotreatment, increases expression2
Okadaic Acidaffects expression, decreases expression2
Esketaminedecreases expression1
bufotalinincreases expression1
methyleugenoldecreases expression1
triphenyl phosphatedecreases expression1
bisphenol Aaffects methylation1
deoxynivalenoldecreases expression1
arseniteaffects binding, increases reaction1
cobaltous chloridedecreases expression1
butyraldehydedecreases expression1
manganese chloridedecreases expression1
pentanaldecreases expression1
avobenzonedecreases expression1
monomethylarsonous acidincreases expression1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, increases expression1
2,2’,4,4’,5-brominated diphenyl etherdecreases expression1
Grape Seed Proanthocyanidinsaffects cotreatment, decreases expression1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.