RIPK2
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Also known as RICKRIP2CARDIAKCARD3
Summary
RIPK2 (receptor interacting serine/threonine kinase 2, HGNC:10020) is a protein-coding gene on chromosome 8q21.3, encoding Receptor-interacting serine/threonine-protein kinase 2 (O43353). Serine/threonine/tyrosine-protein kinase that plays an essential role in modulation of innate and adaptive immune responses.
This gene encodes a member of the receptor-interacting protein (RIP) family of serine/threonine protein kinases. The encoded protein contains a C-terminal caspase activation and recruitment domain (CARD), and is a component of signaling complexes in both the innate and adaptive immune pathways. It is a potent activator of NF-kappaB and inducer of apoptosis in response to various stimuli.
Source: NCBI Gene 8767 — RefSeq curated summary.
At a glance
- GWAS associations: 8
- Clinical variants (ClinVar): 74 total
- Druggable target: yes — 64 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_003821
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:10020 |
| Approved symbol | RIPK2 |
| Name | receptor interacting serine/threonine kinase 2 |
| Location | 8q21.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | RICK, RIP2, CARDIAK, CARD3 |
| Ensembl gene | ENSG00000104312 |
| Ensembl biotype | protein_coding |
| OMIM | 603455 |
| Entrez | 8767 |
Gene structure
Transcript identifiers
Ensembl transcripts: 6 — 3 protein_coding, 2 nonsense_mediated_decay, 1 retained_intron
ENST00000220751, ENST00000517696, ENST00000518673, ENST00000522965, ENST00000893222, ENST00000929530
RefSeq mRNA: 2 — MANE Select: NM_003821
NM_001375360, NM_003821
CCDS: CCDS6247
Canonical transcript exons
ENST00000220751 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000698858 | 89762829 | 89762982 |
| ENSE00001019097 | 89790079 | 89791064 |
| ENSE00001019100 | 89757816 | 89758233 |
| ENSE00003459316 | 89769772 | 89769929 |
| ENSE00003529823 | 89765341 | 89765496 |
| ENSE00003571421 | 89772667 | 89772828 |
| ENSE00003599613 | 89786593 | 89786686 |
| ENSE00003608024 | 89780075 | 89780160 |
| ENSE00003611739 | 89771741 | 89771790 |
| ENSE00003617726 | 89784050 | 89784139 |
| ENSE00003650154 | 89789321 | 89789482 |
Expression profiles
Bgee: expression breadth ubiquitous, 249 present calls, max score 94.59.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 43.4866 / max 999.2793, expressed in 1811 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 89667 | 39.8291 | 1810 |
| 89668 | 2.3239 | 433 |
| 89669 | 0.9185 | 273 |
| 89670 | 0.4150 | 210 |
Top tissues by expression
285 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cartilage tissue | UBERON:0002418 | 94.59 | gold quality |
| monocyte | CL:0000576 | 91.40 | gold quality |
| mononuclear cell | CL:0000842 | 90.72 | gold quality |
| leukocyte | CL:0000738 | 90.52 | gold quality |
| type B pancreatic cell | CL:0000169 | 89.65 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 87.81 | gold quality |
| vena cava | UBERON:0004087 | 87.69 | gold quality |
| bone marrow | UBERON:0002371 | 87.32 | gold quality |
| stromal cell of endometrium | CL:0002255 | 87.31 | gold quality |
| granulocyte | CL:0000094 | 86.84 | gold quality |
| gall bladder | UBERON:0002110 | 86.60 | gold quality |
| oocyte | CL:0000023 | 86.52 | gold quality |
| upper arm skin | UBERON:0004263 | 86.52 | silver quality |
| smooth muscle tissue | UBERON:0001135 | 86.04 | gold quality |
| islet of Langerhans | UBERON:0000006 | 85.62 | gold quality |
| blood | UBERON:0000178 | 85.55 | gold quality |
| endometrium | UBERON:0001295 | 85.43 | gold quality |
| pericardium | UBERON:0002407 | 85.33 | gold quality |
| mucosa of urinary bladder | UBERON:0001259 | 84.57 | gold quality |
| bone marrow cell | CL:0002092 | 84.51 | gold quality |
| secondary oocyte | CL:0000655 | 84.35 | gold quality |
| heart right ventricle | UBERON:0002080 | 83.49 | gold quality |
| vermiform appendix | UBERON:0001154 | 83.48 | gold quality |
| olfactory bulb | UBERON:0002264 | 83.45 | gold quality |
| synovial joint | UBERON:0002217 | 83.21 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 82.84 | gold quality |
| caecum | UBERON:0001153 | 82.82 | gold quality |
| mammary duct | UBERON:0001765 | 82.77 | silver quality |
| epithelial cell of pancreas | CL:0000083 | 82.65 | silver quality |
| cervix epithelium | UBERON:0004801 | 82.58 | silver quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-7052 | yes | 839.83 |
| E-HCAD-4 | yes | 46.57 |
| E-GEOD-70580 | no | 1508.08 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
1 targets.
| Target | Regulation |
|---|---|
| IL12B | Activation |
Upstream regulators (CollecTRI, top): E2F4, IFNG, NFKB1, RELA, TNF
Literature-anchored findings (GeneRIF, showing 40)
- Involvement of receptor-interacting protein 2 in innate and adaptive immune responses (PMID:11894097)
- Rip2 transduces signals from both innate and adaptive immune responses. Functions downstream of the TLR2/3/4, IL-1 and IL-18 receptors. (PMID:11894098)
- These results implicate RIP2 in a previously unrecognized role: a checkpoint for myogenic proliferation and differentiation. (PMID:12138198)
- equilibrium and kinetic folding of a unique protein domain, caspase recruitment domain (CARD), of the RIP-like interacting CLARP kinase (RICK) (RICK-CARD), which adopts a alpha-helical Greek key fold (PMID:12755636)
- role in CARD6 modulation of NF-kappa B activation (PMID:12775719)
- Rip2 has an important role in TCR-induced NF-kappaB activation and T-cell function (PMID:14638696)
- NOD2-dependent ubiquitinylation of NEMO (a key component of the NF-kB signaling complex) is dependent on the scaffolding protein kinase RIP2. (PMID:15620648)
- Caspase-1-mediated cell death is regulated, at least in part, by the balance of Rip2 and Cop; alterations of this balance may contribute to aberrant caspase-1-mediated pathogenesis in Huntington’s disease. (PMID:16354923)
- CARD6 is a regulator of NF-kappaB activation that modulates the functions of RICK protein (PMID:16418290)
- NOD2-S interacts with both, NOD2 and receptor-interacting protein kinase 2 and inhibits the “nodosome” assembly by interfering with the oligomerization of NOD2 (PMID:16492792)
- review of the regulation of interactions of CARD6 with RICK and microtubules [review] (PMID:16582588)
- Results indicate that S176 is a regulatory autophosphorylation site for RIP2 and that S176 phosphorylation can be used to monitor the activation state of RIP2. (PMID:16824733)
- Cop inhibition of cell death, at least to a certain extent, results from its interference with the activation of caspase-1 and caspase-4. (PMID:16920334)
- mutational analysis shows that interaction of NOD1 with RICK is critically dependent on 3 acidic residues on NOD1 CARD & 3 basic residues on RICK CARD & is likely to have a strong electrostatic component (PMID:17054981)
- Although polymorphisms in RIP2 are not likely to be associated with the development of asthma, the genetic variants might contribute to asthma severity in the Japanese population (PMID:17075290)
- NOD2 is responsible for the membrane recruitment of RICK to induce a regulated NF-kappaB signaling and production of proinflammatory cytokines. (PMID:17355968)
- RIPK2 is a marker for resolution of peritoneal dialysis-associated peritonitis. (PMID:17851464)
- Data show that RICK polyubiquitination links TAK1 to IKK complexes, a critical step in Nod1/Nod2-mediated NF-kappaB activation. (PMID:18079694)
- The encapsulation efficiency of RIPK2 is reported. (PMID:18359207)
- We conclude that the endogenous IL-8 response induced by C. trachomatis infection is dependent upon NOD1 signaling through RIP2 as part of a signal system requiring multiple inputs for optimal IL-8 induction. (PMID:18426885)
- upregulation of RIP2 expression is required for rapid resolution of peritonitis (PMID:18566542)
- alternative mRNA splicing may be involved in the regulation of RIP2 actions, underlying the complexity of RIP2-dependent pathways regulating stress signaling and apoptosis. (PMID:19121870)
- detected on all female reproductive tract tissues (PMID:19406482)
- Data suggest a role for XIAP in regulating innate immune responses by interacting with NOD1 and NOD2 through interaction with RIP2. (PMID:19667203)
- Elevated RIP-2 protein levels promote NF-kappaB function via interaction with IKK gamma (PMID:19693652)
- the NOD2/RIP2 pathway has a role in recognition of Yersinia, but caspase-12 does not modulate innate host defense against Y. pestis (PMID:19721713)
- MS80 inhibits CD40-NF-kappaB pathway via targeting RIP2. (PMID:19911254)
- Data suggest that inhibition of rip2 upregulation after wounding might contribute to the reduced and delayed wound re-epithelialization phenotype seen in glucocorticoid-treated patients. (PMID:20025869)
- RIP2 polymorphisms are not associated with inflammatory bowel diseases. (PMID:20645315)
- RIP2 undergoes autophosphorylation on Tyr 474 and this event is necessary for effective NOD2 signaling (PMID:21123652)
- Tri-DAP interacts directly with the LRR domain of NOD1 and consequently increases RICK/NOD1 association and RICK phosphorylation activity (PMID:21757725)
- the CARD of procaspase-1 is differently involved in the formation of procaspase-1 activating platforms and procaspase-1-mediated, RIP2-dependent NF-kappaB activation. (PMID:21862576)
- GEF-H1 mediated the activation of Rip2 during signaling by NOD2, but not in the presence of the 3020insC variant of NOD2 associated with Crohn’s disease. GEF-H1 functioned downstream of NOD2 as part of Rip2-containing signaling complexes. (PMID:21887730)
- RIP2 gene polymorphisms may be associated with susceptibility to systemic lupus erythematosus in the Chinese population. (PMID:22075569)
- IL-4 failed to up-regulate expression of RP105 at the cell surface. In conclusion, the anti-inflammatory actions of IL-4 occur independently of IL-10, RP105, and the kinase activity of RIPK2 (PMID:22484241)
- Association has been found between RIPK2 (rs42490) and cancer risk. (PMID:22504414)
- These findings mechanisms whereby HBeAg modulates intracellular signaling pathways by targeting RIPK2, supporting the concept that HBeAg could impair both innate and adaptive immune responses to promote chronic HBV infection. (PMID:22615316)
- RIP2 tyrosine kinase activity is not only required for NOD2-dependent autophagy but plays a dual role in this process. (PMID:22665475)
- we demonstrate that Porphyromonas gingivalis infection of human aortic endothelial cells resulted in the rapid cleavage of RIPK1 and RIPK2 (PMID:22685397)
- inositol phosphatase SHIP-1 inhibits NOD2-induced NF-kappaB activation by disturbing the interaction of XIAP with RIP2 (PMID:22815893)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ripk2 | ENSDARG00000104290 |
| danio_rerio | ENSDARG00000112870 | |
| mus_musculus | Ripk2 | ENSMUSG00000041135 |
| rattus_norvegicus | Ripk2 | ENSRNOG00000009389 |
Paralogs (23): MAP3K9 (ENSG00000006432), TESK2 (ENSG00000070759), MAP3K13 (ENSG00000073803), ARAF (ENSG00000078061), MAP3K20 (ENSG00000091436), LIMK1 (ENSG00000106683), TESK1 (ENSG00000107140), TNNI3K (ENSG00000116783), RIPK3 (ENSG00000129465), MAP3K10 (ENSG00000130758), RAF1 (ENSG00000132155), RIPK1 (ENSG00000137275), MAP3K12 (ENSG00000139625), KSR1 (ENSG00000141068), MAP3K21 (ENSG00000143674), BRAF (ENSG00000157764), ILK (ENSG00000166333), MLKL (ENSG00000168404), KSR2 (ENSG00000171435), MOS (ENSG00000172680), MAP3K11 (ENSG00000173327), LIMK2 (ENSG00000182541), LRRK2 (ENSG00000188906)
Protein
Protein identifiers
Receptor-interacting serine/threonine-protein kinase 2 — O43353 (reviewed: O43353)
Alternative names: CARD-containing interleukin-1 beta-converting enzyme-associated kinase, RIP-like-interacting CLARP kinase, Receptor-interacting protein 2, Tyrosine-protein kinase RIPK2
All UniProt accessions (4): A0A0S2Z4Z8, E5RGK6, E7ERW9, O43353
UniProt curated annotations — full annotation on UniProt →
Function. Serine/threonine/tyrosine-protein kinase that plays an essential role in modulation of innate and adaptive immune responses. Acts as a key effector of NOD1 and NOD2 signaling pathways: upon activation by bacterial peptidoglycans, NOD1 and NOD2 oligomerize and recruit RIPK2 via CARD-CARD domains, leading to the formation of RIPK2 filaments. Once recruited, RIPK2 autophosphorylates and undergoes ‘Lys-63’-linked polyubiquitination by E3 ubiquitin ligases XIAP, BIRC2 and BIRC3, as well as ‘Met-1’-linked (linear) polyubiquitination by the LUBAC complex, becoming a scaffolding protein for downstream effectors. ‘Met-1’-linked polyubiquitin chains attached to RIPK2 recruit IKBKG/NEMO, which undergoes ‘Lys-63’-linked polyubiquitination in a RIPK2-dependent process. ‘Lys-63’-linked polyubiquitin chains attached to RIPK2 serve as docking sites for TAB2 and TAB3 and mediate the recruitment of MAP3K7/TAK1 to IKBKG/NEMO, inducing subsequent activation of IKBKB/IKKB. In turn, NF-kappa-B is released from NF-kappa-B inhibitors and translocates into the nucleus where it activates the transcription of hundreds of genes involved in immune response, growth control, or protection against apoptosis. The protein kinase activity is dispensable for the NOD1 and NOD2 signaling pathways. Contributes to the tyrosine phosphorylation of the guanine exchange factor ARHGEF2 through Src tyrosine kinase leading to NF-kappa-B activation by NOD2. Also involved in adaptive immunity: plays a role during engagement of the T-cell receptor (TCR) in promoting BCL10 phosphorylation and subsequent NF-kappa-B activation. Plays a role in the inactivation of RHOA in response to NGFR signaling.
Subunit / interactions. Interacts (via CARD domain) with NOD2 (via CARD domain). Interacts (via CARD domain) with NOD1 (via CARD domain). Homooligomer; following interaction with NOD1 or NOD2, homooligomerizes via its CARD domain and forms long filaments named RIPosomes. Found in a signaling complex consisting of at least ARHGEF2, NOD2 and RIPK2. Interacts with ARHGEF2; the interaction mediates tyrosine phosphorylation of RIPK2 by Src kinase CSK. Interacts with MAP3K4; this interaction sequesters RIPK2 from the NOD2 signaling pathway. Interacts with IKBKG/NEMO. The polyubiquitinated protein interacts with MAP3K7/TAK1; interaction is indirect and is mediated by TAB2 and TAB3 that bind to polyubiquitin chains attached to RIPK2. Binds to CFLAR/CLARP and CASP1 via their CARD domains. Binds to BIRC3/c-IAP1 and BIRC2/c-IAP2, TRAF1, TRAF2, TRAF5 and TRAF6. Interacts with NLRP10. Interacts with CARD9. Interacts with INAVA; the interaction takes place upon PRR stimulation. Interacts (via CARD domain) with NGFR (via death domain). Interacts with IRGM; promoting RIPK2 degradation.
Subcellular location. Cytoplasm. Cell membrane. Endoplasmic reticulum.
Tissue specificity. Detected in heart, brain, placenta, lung, peripheral blood leukocytes, spleen, kidney, testis, prostate, pancreas and lymph node.
Post-translational modifications. Polyubiquitinated via both ‘Lys-63’- and ‘Met-1’-linked polyubiquitin following recruitment by NOD1 or NOD2, creating docking sites for downstream effectors, triggering activation of the NF-kappa-B and MAP kinases signaling. ‘Lys-63’-linked polyubiquitination by XIAP is essential for NOD2 signaling and promotes recruitment of the LUBAC complex. Also polyubiquitinated with ‘Lys-63’-linked chains by PELI3, BIRC2/c-IAP1 and BIRC3/c-IAP2. Ubiquitinated on Lys-209 via ‘Lys-63’-linked by ITCH. Undergoes ‘Lys-63’-linked deubiquitination by MYSM1 to attenuate NOD2-mediated inflammation and tissue damage. Polyubiquitinated with ‘Lys-63’-linked chains in response to Shigella infection, promoting its SQSTM1/p62-dependent autophagic degradation. Undergoes ‘Met-1’-linked polyubiquitination; the head-to-tail linear polyubiquitination is mediated by the LUBAC complex in response to NOD2 stimulation ‘Met-1’-linked polyubiquitination. ‘Lys-63’-linked polyubiquitination by XIAP is required for recruimtent of the LUBAC complex and subsequent. Linear polyubiquitination is restricted by FAM105B/otulin, probably to limit NOD2-dependent pro-inflammatory signaling activation of NF-kappa-B. Ubiquitination at Lys-503 by ZNRF4 via ‘Lys-48’-linked polyubiquitination promotes RIPK2 degradation by the proteasome; ubiquitination by ZNRF4 takes place during both acute and NOD2 tolerance conditions. Autophosphorylated. Phosphorylated at Ser-176, either via autophosphorylation or by LRRK2, enhancing activity. Autophosphorylation at Tyr-474 is required for effective NOD2 signaling. Autophosphorylation is however not essential for NOD2 signaling. Phosphorylation at Tyr-381 by Src kinase CSK occurs in a ARHGEF2-dependent manner and is required for NOD2-dependent innate immune activation. Degraded via selective autophagy following interaction with IRGM. IRGM promotes NOD1/NOD2-RIPK2 RIPosome recruitment to autophagosome membranes. RIPK2 biquitinated via ‘Lys-63’-linked chains is then recognized by SQSTM1/p62, leading to the SQSTM1/p62-dependent autophagic degradation of the NOD1/NOD2-RIPK2 RIPosome. (Microbial infection) Acetylation of Ser-174, Ser-176 and Ser-178 by Yersinia YopJ prevents phosphorylation and activation, thereby promoting cell death.
Activity regulation. In the inactive state, the helix alphaC is packed against the helical, non-phosphorylated activation segment (AS). Upon activation, helix alphaC is displaced and the phosphorylated AS becomes disordered. Specifically inhibited by GSK583, which blocks NOD2 signaling by interfering with XIAP binding to RIPK2. Specifically inhibited by CSLP37 and CSLP43, which blocks NOD2 signaling by interfering with XIAP binding to RIPK2.
Domain organisation. Contains an N-terminal kinase domain and a C-terminal caspase activation and recruitment domain (CARD) that mediates the recruitment of CARD-containing proteins.
Similarity. Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| O43353-1 | 1 | yes |
| O43353-2 | 2 |
RefSeq proteins (2): NP_001362289, NP_003812* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR001245 | Ser-Thr/Tyr_kinase_cat_dom | Domain |
| IPR001315 | CARD | Domain |
| IPR008271 | Ser/Thr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR011029 | DEATH-like_dom_sf | Homologous_superfamily |
| IPR017322 | Rcpt-int_Ser/Thr_kinase-2 | Family |
| IPR042149 | CARD_RIP2 | Domain |
| IPR051681 | Ser/Thr_Kinases-Pseudokinases | Family |
Pfam: PF00619, PF07714
Enzyme classification (BRENDA):
- EC 2.7.10.2 — non-specific protein-tyrosine kinase (BRENDA: 41 organisms, 396 substrates, 479 inhibitors, 43 Km, 32 kcat entries)
- EC 2.7.11.30 — receptor protein serine/threonine kinase (BRENDA: 8 organisms, 67 substrates, 81 inhibitors, 4 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
9 substrates with measured Km, best-characterized 9. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.014–17.64 | 12 |
| [KDSRC KINASE]-L-TYROSINE | 0.0057–0.24 | 12 |
| POLY(GLU4-TYR) | 0.018–0.659 | 10 |
| ATP | 0.0057–0.0088 | 2 |
| EEEEYIQ[DP]-8-HYDROXY-5-(N,N-DIMETHYLSULFONAMIDO | 0.057 | 1 |
| S1 PEPTIDE | 0.037 | 1 |
| KKVLTQMGSPSIRCS(P)SVS | 0.26 | 1 |
| KVLTQMGSPSVRCS(P)SMS | 0.331 | 1 |
| EEEEY | — | 0 |
Catalyzed reactions (Rhea), 3 shown:
- L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+) (RHEA:10596)
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
UniProt features (120 total): mutagenesis site 38, modified residue 24, helix 19, strand 12, turn 7, cross-link 4, region of interest 3, sequence variant 3, domain 2, binding site 2, sequence conflict 2, chain 1, splice variant 1, compositionally biased region 1, active site 1
Structure
Experimental structures (PDB)
33 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7OBS | X-RAY DIFFRACTION | 1.8 |
| 9F3V | X-RAY DIFFRACTION | 1.94 |
| 5NG0 | X-RAY DIFFRACTION | 2 |
| 8X2O | X-RAY DIFFRACTION | 2.26 |
| 7OBT | X-RAY DIFFRACTION | 2.3 |
| 6ES0 | X-RAY DIFFRACTION | 2.38 |
| 5AR2 | X-RAY DIFFRACTION | 2.44 |
| 5J7B | X-RAY DIFFRACTION | 2.53 |
| 6HMX | X-RAY DIFFRACTION | 2.53 |
| 6SZJ | X-RAY DIFFRACTION | 2.53 |
| 5NG3 | X-RAY DIFFRACTION | 2.6 |
| 6RNA | X-RAY DIFFRACTION | 2.62 |
| 5AR5 | X-RAY DIFFRACTION | 2.66 |
| 6UL8 | X-RAY DIFFRACTION | 2.68 |
| 5J79 | X-RAY DIFFRACTION | 2.69 |
| 6RN8 | X-RAY DIFFRACTION | 2.69 |
| 5AR4 | X-RAY DIFFRACTION | 2.7 |
| 5AR7 | X-RAY DIFFRACTION | 2.71 |
| 4C8B | X-RAY DIFFRACTION | 2.75 |
| 5AR8 | X-RAY DIFFRACTION | 2.79 |
| 5NG2 | X-RAY DIFFRACTION | 2.8 |
| 5W5J | X-RAY DIFFRACTION | 2.85 |
| 5W5O | X-RAY DIFFRACTION | 2.89 |
| 6SZE | X-RAY DIFFRACTION | 2.94 |
| 6S1F | X-RAY DIFFRACTION | 3.11 |
| 8AZA | ELECTRON MICROSCOPY | 3.15 |
| 5AR3 | X-RAY DIFFRACTION | 3.23 |
| 6FU5 | X-RAY DIFFRACTION | 3.26 |
| 6GFJ | X-RAY DIFFRACTION | 3.3 |
| 6GGS | ELECTRON MICROSCOPY | 3.94 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O43353-F1 | 76.99 | 0.54 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 146 (proton acceptor)
Ligand- & substrate-binding residues (2): 24–32; 47
Post-translational modifications (28): 149, 168, 174, 174, 176, 176, 178, 178, 180, 181, 181, 183, 189, 363, 363, 381, 393, 397, 423, 474 …
Mutagenesis-validated functional residues (38):
| Position | Phenotype |
|---|---|
| 47 | abolishes protein-kinase activity without preventing ability to activate nf-kappa-b downstream of nod2. |
| 47 | abolishes protein-kinase activity. reduces fas-mediated apoptosis. |
| 95 | abolished ability to activate nf-kappa-b downstream of nod2. |
| 146 | abolishes protein-kinase activity without preventing ability to activate nf-kappa-b downstream of nod2. |
| 176 | decreased phosphorylation and activation. abolished phosphorylation by lrrk2. |
| 209 | decreased polyubiquitination. |
| 381 | prevents phosphorylation. reduces serine and threonine phosphorylation of arhgef2. |
| 410 | reduced ubiquitination by xiap and activation of nf-kappa-b; when associated with r-538. |
| 437 | decreased interaction with ngfr. |
| 444 | abolishes interaction with nod1. abolished activation of nf-kappa-b. |
| 445 | strongly decreased activation of nf-kappa-b. does not affect activation of nf-kappa-b; when associated with e-458. |
| 449 | strongly decreased activation of nf-kappa-b. |
| 450 | increased activation of nf-kappa-b. |
| 452 | impaired interaction with nod2 and decreased homooligomerization and ability to transmit nod2 signaling. |
| 453 | decreased homooligomerization and ability to transmit nod2 signaling. |
| 455 | decreased homooligomerization and ability to transmit nod2 signaling. |
| 458 | strongly decreased activation of nf-kappa-b. does not affect activation of nf-kappa-b; when associated with r-445. |
| 461 | abolished activation of nf-kappa-b. |
| 467 | decreased interaction with ngfr. |
| 470 | decreased homooligomerization and ability to transmit nod2 signaling. |
| 471 | abolished activation of nf-kappa-b. |
| 471 | decreased interaction with ngfr. |
| 472 | abolished activation of nf-kappa-b. |
| 474 | decreases interaction with nod2. |
| 474 | abolished activation of nf-kappa-b. |
Function
Pathways and Gene Ontology
Reactome pathways
9 pathways
| ID | Pathway |
|---|---|
| R-HSA-168638 | NOD1/2 Signaling Pathway |
| R-HSA-202424 | Downstream TCR signaling |
| R-HSA-209543 | p75NTR recruits signalling complexes |
| R-HSA-445989 | TAK1-dependent IKK and NF-kappa-B activation |
| R-HSA-450302 | activated TAK1 mediates p38 MAPK activation |
| R-HSA-450321 | JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1 |
| R-HSA-5689896 | Ovarian tumor domain proteases |
| R-HSA-9020702 | Interleukin-1 signaling |
| R-HSA-9705671 | SARS-CoV-2 activates/modulates innate and adaptive immune responses |
MSigDB gene sets: 511 (showing top):
GSE45365_NK_CELL_VS_CD8_TCELL_UP, GOBP_REGULATION_OF_CELL_ACTIVATION, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_REGULATION_OF_LEUKOCYTE_PROLIFERATION, GOBP_REGULATION_OF_AUTOPHAGY, REACTOME_INNATE_IMMUNE_SYSTEM, GOBP_POSITIVE_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE, GOBP_REGULATION_OF_ALPHA_BETA_T_CELL_ACTIVATION, GOBP_POSITIVE_REGULATION_OF_HEMOPOIESIS, GOBP_REGULATION_OF_PHOSPHORYLATION, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, GOBP_POSITIVE_REGULATION_OF_TYPE_I_INTERFERON_PRODUCTION, REACTOME_NOD1_2_SIGNALING_PATHWAY, GOBP_REGULATION_OF_STRESS_ACTIVATED_PROTEIN_KINASE_SIGNALING_CASCADE, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM
GO Biological Process (65): positive regulation of cytokine-mediated signaling pathway (GO:0001961), adaptive immune response (GO:0002250), positive regulation of T-helper 1 type immune response (GO:0002827), apoptotic process (GO:0006915), inflammatory response (GO:0006954), signal transduction (GO:0007165), canonical NF-kappaB signal transduction (GO:0007249), JNK cascade (GO:0007254), cytokine-mediated signaling pathway (GO:0019221), positive regulation of protein ubiquitination (GO:0031398), lipopolysaccharide-mediated signaling pathway (GO:0031663), positive regulation of chemokine production (GO:0032722), positive regulation of interferon-alpha production (GO:0032727), positive regulation of interferon-beta production (GO:0032728), positive regulation of type II interferon production (GO:0032729), positive regulation of interleukin-1 beta production (GO:0032731), positive regulation of interleukin-12 production (GO:0032735), positive regulation of interleukin-2 production (GO:0032743), positive regulation of interleukin-6 production (GO:0032755), positive regulation of tumor necrosis factor production (GO:0032760), positive regulation of stress-activated MAPK cascade (GO:0032874), immature T cell proliferation in thymus (GO:0033080), positive regulation of immature T cell proliferation in thymus (GO:0033092), toll-like receptor 2 signaling pathway (GO:0034134), toll-like receptor 4 signaling pathway (GO:0034142), CD4-positive, alpha-beta T cell proliferation (GO:0035739), defense response to bacterium (GO:0042742), positive regulation of apoptotic process (GO:0043065), positive regulation of canonical NF-kappaB signal transduction (GO:0043123), response to exogenous dsRNA (GO:0043330), innate immune response (GO:0045087), positive regulation of T-helper 1 cell differentiation (GO:0045627), positive regulation of transcription by RNA polymerase II (GO:0045944), positive regulation of JNK cascade (GO:0046330), positive regulation of peptidyl-tyrosine phosphorylation (GO:0050731), defense response to Gram-positive bacterium (GO:0050830), T cell receptor signaling pathway (GO:0050852), protein homooligomerization (GO:0051260), stress-activated MAPK cascade (GO:0051403), positive regulation of macrophage cytokine production (GO:0060907)
GO Molecular Function (18): protein serine/threonine kinase activity (GO:0004674), JUN kinase kinase kinase activity (GO:0004706), non-membrane spanning protein tyrosine kinase activity (GO:0004715), signaling receptor binding (GO:0005102), ATP binding (GO:0005524), LIM domain binding (GO:0030274), signaling adaptor activity (GO:0035591), identical protein binding (GO:0042802), protein homodimerization activity (GO:0042803), CARD domain binding (GO:0050700), caspase binding (GO:0089720), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), protein kinase activity (GO:0004672), protein tyrosine kinase activity (GO:0004713), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (8): cytoplasm (GO:0005737), endoplasmic reticulum (GO:0005783), cytosol (GO:0005829), cytoskeleton (GO:0005856), plasma membrane (GO:0005886), vesicle (GO:0031982), protein-containing complex (GO:0032991), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-13 pathways:
| Category | Pathways |
|---|---|
| MAP kinase activation | 2 |
| Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways | 1 |
| TCR signaling | 1 |
| p75NTR signals via NF-kB | 1 |
| MyD88:MAL(TIRAP) cascade initiated on plasma membrane | 1 |
| Toll Like Receptor 3 (TLR3) Cascade | 1 |
| Interleukin-1 signaling | 1 |
| TRIF (TICAM1)-mediated TLR4 signaling | 1 |
| TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation | 1 |
| MyD88 cascade initiated on plasma membrane | 1 |
| Deubiquitination | 1 |
| Interleukin-1 family signaling | 1 |
| SARS-CoV-2-host interactions | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| positive regulation of cytokine production | 5 |
| protein kinase activity | 3 |
| cellular anatomical structure | 3 |
| cell surface receptor signaling pathway | 2 |
| positive regulation of type I interferon production | 2 |
| protein binding | 2 |
| protein domain specific binding | 2 |
| cytoplasm | 2 |
| regulation of cytokine-mediated signaling pathway | 1 |
| positive regulation of signal transduction | 1 |
| cytokine-mediated signaling pathway | 1 |
| positive regulation of response to cytokine stimulus | 1 |
| immune response | 1 |
| positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | 1 |
| regulation of T-helper 1 type immune response | 1 |
| T-helper 1 type immune response | 1 |
| programmed cell death | 1 |
| apoptotic signaling pathway | 1 |
| execution phase of apoptosis | 1 |
| defense response | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| intracellular signaling cassette | 1 |
| MAPK cascade | 1 |
| cellular response to cytokine stimulus | 1 |
| protein ubiquitination | 1 |
| regulation of protein ubiquitination | 1 |
| positive regulation of protein modification by small protein conjugation or removal | 1 |
| cellular response to lipopolysaccharide | 1 |
| chemokine production | 1 |
| regulation of chemokine production | 1 |
| interferon-alpha production | 1 |
| regulation of interferon-alpha production | 1 |
| interferon-beta production | 1 |
| regulation of interferon-beta production | 1 |
| type II interferon production | 1 |
| regulation of type II interferon production | 1 |
Protein interactions and networks
STRING
2761 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| RIPK2 | NOD2 | Q9HC29 | 999 |
| RIPK2 | NOD1 | Q9Y239 | 999 |
| RIPK2 | CARD6 | Q9BX69 | 955 |
| RIPK2 | TRAF3 | Q13114 | 928 |
| RIPK2 | XIAP | P98170 | 911 |
| RIPK2 | IKBKG | Q9Y6K9 | 863 |
| RIPK2 | NLRP3 | Q96P20 | 848 |
| RIPK2 | TRAF6 | Q9Y4K3 | 825 |
| RIPK2 | CASP1 | P29466 | 774 |
| RIPK2 | TAB2 | Q9NYJ8 | 761 |
| RIPK2 | NLRC4 | Q9NPP4 | 752 |
| RIPK2 | CCDC122 | Q5T0U0 | 749 |
| RIPK2 | TAB3 | Q8N5C8 | 738 |
| RIPK2 | NLRP1 | Q9C000 | 736 |
| RIPK2 | ATG16L1 | Q676U5 | 727 |
IntAct
141 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| RIPK2 | XIAP | psi-mi:“MI:0915”(physical association) | 0.950 |
| XIAP | RIPK2 | psi-mi:“MI:0915”(physical association) | 0.950 |
| XIAP | RIPK2 | psi-mi:“MI:0914”(association) | 0.950 |
| NOD2 | RIPK2 | psi-mi:“MI:0915”(physical association) | 0.870 |
| RIPK2 | NOD2 | psi-mi:“MI:0915”(physical association) | 0.870 |
| RIPK2 | NOD2 | psi-mi:“MI:2364”(proximity) | 0.870 |
BioGRID (195): RIPK2 (Two-hybrid), RIPK2 (Two-hybrid), RIPK2 (Affinity Capture-RNA), RIPK2 (Affinity Capture-RNA), RIPK2 (Affinity Capture-RNA), RIPK2 (Reconstituted Complex), RIPK2 (Two-hybrid), RIPK2 (Affinity Capture-Western), RIPK2 (Proximity Label-MS), RIPK2 (Affinity Capture-Western), RIPK2 (Co-localization), IRF4 (Affinity Capture-Western), RIPK2 (Affinity Capture-Western), RIPK2 (Biochemical Activity), KCTD12 (Affinity Capture-MS)
ESM2 similar proteins: A2RT67, A2RUS2, A4IJ06, B0CM32, B0KW86, E1B8U2, G3X9X1, O15519, O35732, O43353, O94955, O95267, O95456, P29594, P42575, P55215, P58801, Q0P5F2, Q14790, Q1RMU2, Q2TBA3, Q568M3, Q5E9Y6, Q5RD56, Q5RDY3, Q5RED8, Q66H62, Q69ZK0, Q6NTL4, Q6ZWE6, Q70Z35, Q80TQ2, Q86TP1, Q8BM47, Q8C0Q9, Q8CHT1, Q8IV45, Q8IY47, Q8K2I9, Q8N5V2
Diamond homologs: A2VDU3, C0LGF4, C0LGI2, C0LGL9, C0LGP2, C0LGT5, C0LGU1, C0LGX3, D7UPN3, F4JTP5, O22558, O43318, O43353, O80963, O81069, P0C8E4, P18161, P47735, P57078, P58801, Q05609, Q0PW40, Q0WNY5, Q13546, Q2MHE4, Q3SZJ2, Q54H45, Q54H46, Q54I36, Q54IP4, Q54M77, Q54N73, Q54QQ1, Q54RB7, Q54RR9, Q54TA1, Q54TM7, Q54XX5, Q54Y55, Q55GU0
SIGNOR signaling
21 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| RIPK2 | up-regulates | IRF5 | phosphorylation |
| RIPK2 | “up-regulates activity” | RIPK2 | phosphorylation |
| NOD2 | “up-regulates activity” | RIPK2 | binding |
| TNF | “up-regulates quantity by expression” | RIPK2 | “transcriptional regulation” |
| IFNG | “up-regulates quantity by expression” | RIPK2 | “transcriptional regulation” |
| RIPK2 | “up-regulates activity” | IKBKG | |
| BIRC2 | “up-regulates activity” | RIPK2 | polyubiquitination |
| BIRC3 | “up-regulates activity” | RIPK2 | polyubiquitination |
| ZNRF4 | “down-regulates quantity by destabilization” | RIPK2 | ubiquitination |
| LRRK2 | “up-regulates activity” | RIPK2 | phosphorylation |
| RIPK2 | “up-regulates activity” | MAPK1 | phosphorylation |
| RIPK2 | “up-regulates activity” | MAP2K7 | phosphorylation |
| XIAP | “up-regulates activity” | RIPK2 | ubiquitination |
| LUBAC | “up-regulates activity” | RIPK2 | polyubiquitination |
| PELI3 | “up-regulates activity” | RIPK2 | ubiquitination |
| IRF4 | “down-regulates activity” | RIPK2 | binding |
| RIPK2 | “up-regulates activity” | TRAF6 | binding |
| ATG16L1 | “down-regulates activity” | RIPK2 | binding |
| ITCH | “up-regulates activity” | RIPK2 | binding |
| hsa-miR-150-5p | “down-regulates quantity by repression” | RIPK2 | “post transcriptional regulation” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 81 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Gap junction trafficking and regulation | 5 | 35.5× | 6e-06 |
| Gap junction trafficking | 5 | 35.5× | 6e-06 |
| TNFR1-induced NF-kappa-B signaling pathway | 7 | 35.1× | 1e-07 |
| TNFR1-induced proapoptotic signaling | 5 | 32.8× | 8e-06 |
| Regulation of necroptotic cell death | 5 | 32.8× | 8e-06 |
| RHO GTPases activate IQGAPs | 6 | 31.0× | 2e-06 |
| Attenuation phase | 5 | 30.4× | 1e-05 |
| NOD1/2 Signaling Pathway | 6 | 28.4× | 2e-06 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein refolding | 5 | 41.1× | 5e-05 |
| positive regulation of type I interferon production | 5 | 27.7× | 2e-04 |
| canonical NF-kappaB signal transduction | 5 | 24.1× | 3e-04 |
| tumor necrosis factor-mediated signaling pathway | 5 | 21.7× | 4e-04 |
| response to unfolded protein | 5 | 19.8× | 5e-04 |
| cellular response to type II interferon | 5 | 13.7× | 2e-03 |
| obsolete positive regulation of NF-kappaB transcription factor activity | 5 | 13.5× | 2e-03 |
| regulation of inflammatory response | 6 | 13.3× | 5e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
74 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 42 |
| Likely benign | 5 |
| Benign | 4 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1363 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 8:89758234:GTA:G | donor_loss | 1.0000 |
| 8:89758235:T:A | donor_loss | 1.0000 |
| 8:89762827:A:AG | acceptor_gain | 1.0000 |
| 8:89762828:G:GG | acceptor_gain | 1.0000 |
| 8:89762828:GT:G | acceptor_gain | 1.0000 |
| 8:89762983:GTAA:G | donor_loss | 1.0000 |
| 8:89762984:T:A | donor_loss | 1.0000 |
| 8:89765327:A:AG | acceptor_gain | 1.0000 |
| 8:89765329:A:AG | acceptor_gain | 1.0000 |
| 8:89765330:T:G | acceptor_gain | 1.0000 |
| 8:89765331:A:AG | acceptor_gain | 1.0000 |
| 8:89765333:A:AG | acceptor_gain | 1.0000 |
| 8:89765333:ATAT:A | acceptor_gain | 1.0000 |
| 8:89765334:T:G | acceptor_gain | 1.0000 |
| 8:89765335:A:AG | acceptor_gain | 1.0000 |
| 8:89765335:AT:A | acceptor_gain | 1.0000 |
| 8:89765336:T:TA | acceptor_gain | 1.0000 |
| 8:89765336:TGAA:T | acceptor_loss | 1.0000 |
| 8:89765337:GAAGA:G | acceptor_loss | 1.0000 |
| 8:89765339:A:AG | acceptor_gain | 1.0000 |
| 8:89765339:AGA:A | acceptor_loss | 1.0000 |
| 8:89765340:G:GC | acceptor_gain | 1.0000 |
| 8:89765340:GA:G | acceptor_gain | 1.0000 |
| 8:89765340:GAA:G | acceptor_gain | 1.0000 |
| 8:89765340:GAAA:G | acceptor_gain | 1.0000 |
| 8:89765492:T:G | donor_gain | 1.0000 |
| 8:89765493:TAAGG:T | donor_loss | 1.0000 |
| 8:89765494:AAG:A | donor_gain | 1.0000 |
| 8:89765494:AAGG:A | donor_loss | 1.0000 |
| 8:89765495:AGGT:A | donor_loss | 1.0000 |
AlphaMissense
3555 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 8:89758201:G:C | K47N | 1.000 |
| 8:89758201:G:T | K47N | 1.000 |
| 8:89762903:G:A | G83E | 1.000 |
| 8:89762936:T:A | V94D | 1.000 |
| 8:89765417:T:C | L135P | 1.000 |
| 8:89765443:C:G | H144D | 1.000 |
| 8:89765450:A:C | D146A | 1.000 |
| 8:89765450:A:G | D146G | 1.000 |
| 8:89765450:A:T | D146V | 1.000 |
| 8:89765451:C:A | D146E | 1.000 |
| 8:89765451:C:G | D146E | 1.000 |
| 8:89765453:T:C | L147S | 1.000 |
| 8:89765466:T:A | N151K | 1.000 |
| 8:89765466:T:G | N151K | 1.000 |
| 8:89769778:G:C | D164H | 1.000 |
| 8:89769779:A:C | D164A | 1.000 |
| 8:89769779:A:T | D164V | 1.000 |
| 8:89769780:T:A | D164E | 1.000 |
| 8:89769780:T:G | D164E | 1.000 |
| 8:89769781:T:C | F165L | 1.000 |
| 8:89769783:T:A | F165L | 1.000 |
| 8:89769783:T:G | F165L | 1.000 |
| 8:89772814:G:C | R280T | 1.000 |
| 8:89772815:A:C | R280S | 1.000 |
| 8:89772815:A:T | R280S | 1.000 |
| 8:89758164:C:A | A35D | 0.999 |
| 8:89758194:C:A | A45D | 0.999 |
| 8:89758199:A:C | K47Q | 0.999 |
| 8:89758199:A:G | K47E | 0.999 |
| 8:89762854:G:C | A67P | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000021635 (8:89772543 G>C), RS1000058498 (8:89763085 A>G), RS1000071789 (8:89777936 A>G), RS1000074293 (8:89772216 A>T), RS1000212765 (8:89767391 T>A), RS1000366155 (8:89764986 A>G), RS1000453154 (8:89781341 C>T), RS1000468543 (8:89758042 G>A,C), RS1000611672 (8:89791008 A>G), RS1000649465 (8:89774263 G>A), RS1000746386 (8:89774550 A>G), RS1000772473 (8:89759276 G>A), RS1000804882 (8:89759650 T>C), RS1000869928 (8:89779566 C>A,T), RS1001223138 (8:89781239 G>A)
Disease associations
OMIM: gene MIM:603455 | disease phenotypes: MIM:609888
GenCC curated gene-disease
Mondo (1): leprosy, susceptibility to, 1 (MONDO:0012358)
Orphanet (1): Leprosy (Orphanet:548)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
8 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000546_5 | Leprosy | 1.000000e-12 |
| GCST000546_6 | Leprosy | 1.000000e-16 |
| GCST000579_54 | Cognitive performance | 3.000000e-06 |
| GCST001729_17 | Crohn’s disease | 1.000000e-08 |
| GCST002772_19 | Leprosy | 2.000000e-35 |
| GCST002772_6 | Leprosy | 1.000000e-21 |
| GCST003073_5 | Cerebral amyloid deposition (PET imaging) | 7.000000e-07 |
| GCST004009_11 | Leprosy | 5.000000e-08 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0003926 | neuropsychological test |
| EFO:0007707 | cerebral amyloid deposition measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (4): CHEMBL4296139 (PROTEIN-PROTEIN INTERACTION), CHEMBL4879529 (PROTEIN-PROTEIN INTERACTION), CHEMBL4888447 (PROTEIN-PROTEIN INTERACTION), CHEMBL5014 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
64 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 395,244 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1171837 | PONATINIB | 4 | 8,955 |
| CHEMBL1173655 | AFATINIB | 4 | 15,144 |
| CHEMBL1229517 | VEMURAFENIB | 4 | 15,704 |
| CHEMBL1287853 | FEDRATINIB | 4 | 3,554 |
| CHEMBL1289494 | TIVOZANIB | 4 | 4,455 |
| CHEMBL1289601 | LENVATINIB | 4 | 8,784 |
| CHEMBL1289926 | AXITINIB | 4 | 15,732 |
| CHEMBL1336 | SORAFENIB | 4 | 86,060 |
| CHEMBL1873475 | IBRUTINIB | 4 | 7,994 |
| CHEMBL1946170 | REGORAFENIB | 4 | 12,678 |
| CHEMBL2028663 | DABRAFENIB | 4 | 12,430 |
| CHEMBL2105717 | CABOZANTINIB | 4 | 11,177 |
| CHEMBL2110732 | DACOMITINIB ANHYDROUS | 4 | 6,578 |
| CHEMBL24828 | VANDETANIB | 4 | 42,230 |
| CHEMBL288441 | BOSUTINIB | 4 | 12,255 |
| CHEMBL3301612 | ENCORAFENIB | 4 | 4,624 |
| CHEMBL3301622 | GILTERITINIB | 4 | 2,395 |
| CHEMBL477772 | PAZOPANIB | 4 | 15,540 |
| CHEMBL5416410 | DASATINIB | 4 | 655 |
| CHEMBL553 | ERLOTINIB | 4 | 108,300 |
| CHEMBL554 | LAPATINIB | 4 | |
| CHEMBL576982 | QUIZARTINIB | 4 | |
| CHEMBL601719 | CRIZOTINIB | 4 | |
| CHEMBL939 | GEFITINIB | 4 | |
| CHEMBL1091644 | LINSITINIB | 3 | |
| CHEMBL2087361 | ICOTINIB | 3 | |
| CHEMBL2105728 | CRENOLANIB | 3 | |
| CHEMBL217092 | SARACATINIB | 3 | |
| CHEMBL31965 | CANERTINIB | 3 | |
| CHEMBL3544983 | TESEVATINIB | 3 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Receptor interacting protein kinase (RIPK) family
Most potent curated ligand interactions (9 total), top 9:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| RIPK2 inhibitor 8 | Inhibition | 8.52 | pIC50 |
| RIPK2 inhibitor 5 | Inhibition | 8.3 | pIC50 |
| GSK583 | Inhibition | 8.3 | pIC50 |
| OD36 | Inhibition | 8.28 | pIC50 |
| ponatinib | Inhibition | 7.85 | pIC50 |
| Src kinase inhibitor I | Inhibition | 7.59 | pIC50 |
| ZAK inhibitor 6p | Inhibition | 7.24 | pKd |
| WJH-C19 | Inhibition | 6.0 | pIC50 |
| PN10 | Inhibition | 5.85 | pIC50 |
Binding affinities (BindingDB)
440 measured of 633 human assays (828 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| N-cyclopropyl-4-methyl-3-[1-[5-[(1-methylpiperidin-4-yl)amino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 0.61 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| BDBM303369 | IC50 | 0.81 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-2-fluoro-4-methyl-5-[1-[5-[[8-(oxetan-3-yl)-8-azabicyclo[3.2.1]octan-3-yl]amino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 0.9 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-4-methyl-3-[1-[5-[[1-(oxolan-3-yl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 0.94 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-3-[1-[5-[[1-(1,4-dioxan-2-ylmethyl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-4-methylbenzamide | IC50 | 0.95 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| 5-[1-(2-acetamido-1,3-thiazol-5-yl)pyrazol-4-yl]-4-chloro-N-cyclopropyl-2-fluorobenzamide | IC50 | 0.99 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-2-fluoro-5-[1-[5-[[1-(2-methoxyethyl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-4-methylbenzamide | IC50 | 1 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-5-[1-(5-cyclopropyl-3-pyridinyl)pyrazol-4-yl]-2-fluoro-4-methylbenzamide | IC50 | 1 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-4-methyl-3-[1-[5-[[1-(3-oxabicyclo[3.1.0]hexan-6-ylmethyl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 1 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-2-fluoro-4-methyl-5-[1-[5-[[1-(oxetan-3-yl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 1.1 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-2-fluoro-4-methyl-5-[1-[5-[(1-methylpiperidin-4-yl)amino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 1.1 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-3-[1-[5-[[1-(4-methoxycyclohexyl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-4-methylbenzamide | IC50 | 1.1 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-3-[1-[5-[[1-(3-methoxyoxan-4-yl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-4-methylbenzamide | IC50 | 1.1 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-Cyclopropyl-5-{1-[7-ethoxy-6-(4-fluoro-1-methyl-piperidin-4-yl)-imidazo[1,2-a]pyridin-3-yl]-1H-pyrazol-4-yl}-2-fluoro-4-methyl-benzamide | IC50 | 1.1 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| 3-[1-[5-[[1-(1-acetylpiperidin-4-yl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-N-cyclopropyl-4-methylbenzamide | IC50 | 1.2 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-4-methyl-3-[1-[5-[[1-(2-methyloxan-4-yl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 1.2 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| 3-[1-(6-tert-butylsulfonyl-7-methoxyimidazo[1,2-a]pyridin-3-yl)pyrazol-4-yl]-N-cyclopropyl-4-methylbenzamide | IC50 | 1.2 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| 3-[1-[2-(cyclopropanecarbonylamino)-1,3-thiazol-5-yl]pyrazol-4-yl]-N-cyclopropyl-4-methylbenzamide | IC50 | 1.2 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-4-methyl-3-[1-[5-(oxan-4-ylamino)-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 1.3 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-2-fluoro-5-[1-[5-[[(3R,4S)-3-fluoro-1-methylpiperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-4-methylbenzamide | IC50 | 1.3 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| 5-[1-(6-tert-butylsulfonylimidazo[1,2-a]pyridin-3-yl)pyrazol-4-yl]-4-chloro-N-cyclopropyl-2-fluorobenzamide | IC50 | 1.3 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-Cyclopropyl-5-{1-[6-(1-ethyl-4-fluoro-piperidin-4-yl)-7-methoxy-imidazo[1,2-a]pyridin-3-yl]-1H-pyrazol-4-yl}-2-fluoro-4-methyl-benzamide | IC50 | 1.3 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-5-[1-[5-[4-(dimethylamino)piperidin-1-yl]-3-pyridinyl]pyrazol-4-yl]-2-fluoro-4-methylbenzamide | IC50 | 1.4 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-2-fluoro-5-[1-[6-(2-hydroxypropan-2-yl)imidazo[1,2-a]pyridin-3-yl]pyrazol-4-yl]-4-methylbenzamide | IC50 | 1.4 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-Cyclopropyl-2-fluoro-5-{1-[6-(4-fluoro-1-methylpiperidin-4-yl)-7-methoxyimidazo[1,2-a]pyridin-3-yl]-H-pyrazol-4-yl}-4-methyl-benzamide | IC50 | 1.4 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-Cyclopropyl-2-fluoro-4-methyl-5-{1-[6-((R)-1-methyl-pyrrolidin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-1H-pyrazol-4-yl}-benzamide(99) | IC50 | 1.4 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-4-methyl-3-[1-[5-(piperidin-4-ylamino)-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 1.5 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| 3-[1-[5-[(1-cyclobutylpiperidin-4-yl)amino]-3-pyridinyl]pyrazol-4-yl]-N-cyclopropyl-4-methylbenzamide | IC50 | 1.5 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-4-methyl-3-[1-[5-[[1-(oxan-3-yl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 1.5 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-2-fluoro-5-[1-[5-[[1-(2-fluoroethyl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-4-methylbenzamide | IC50 | 1.5 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-5-[1-[5-[[(4R)-3,3-difluoro-1-methylpiperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-2-fluoro-4-methylbenzamide | IC50 | 1.5 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-Cyclopropyl-5-{1-[6-(1-dimethylcarbamoylmethyl-piperidin-4-yl)-imidazo[1,2-a]pyridin-3-yl]-1H-pyrazol-4-yl}-2-fluoro-4-methyl-benzamide | IC50 | 1.5 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-4-methyl-3-[1-[5-[1-(oxolan-3-yl)ethylamino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 1.6 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-3-[1-[5-[[1-(4-hydroxybutan-2-yl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-4-methylbenzamide | IC50 | 1.6 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-3-[1-[5-[[1-(1-methoxypropan-2-yl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-4-methylbenzamide | IC50 | 1.6 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| 3-[1-(5-tert-butylsulfonylpyrazolo[1,5-a]pyridin-3-yl)pyrazol-4-yl]-N-cyclopropyl-4-methylbenzamide | IC50 | 1.6 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-2-fluoro-4-methyl-5-[1-(6-morpholin-4-ylsulfonylimidazo[1,2-a]pyridin-3-yl)pyrazol-4-yl]benzamide | IC50 | 1.6 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-2-fluoro-4-methyl-5-[1-[6-[(3S)-1-methylpyrrolidin-3-yl]imidazo[1,2-a]pyridin-3-yl]pyrazol-4-yl]benzamide | IC50 | 1.6 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-4-methyl-3-[1-[5-[[1-(oxan-4-ylmethyl)piperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]benzamide | IC50 | 1.7 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-cyclopropyl-5-[1-[5-[[(4S)-3,3-difluoro-1-methylpiperidin-4-yl]amino]-3-pyridinyl]pyrazol-4-yl]-2-fluoro-4-methylbenzamide | IC50 | 1.7 nM | US-10138222: Substituted benzamides as RIPK2 inhibitors |
| N-Cyclopropyl-2-fluoro-4-methyl-5-{1-[6-(1-oxetan-3-yl-piperidin-4-yl)-imidazo[1,2-a]pyridin-3-yl]-1H-pyrazol-4-yl}-benzamide | IC50 | 1.7 nM | US-10138241: Substituted benzamides as RIPK2 inhibitors |
| Staurosporine | KD | 1.7 nM | |
| 3-(6-(tert- butylsulfonyl)-7- methoxyimidazo[1,2- a]pyridin-3-yl)-2,5- difluoroaniline | IC50 | 1.75 nM | US-20250346593: IMIDAZO(1,2-1)PYRIDINE DERIVATIVES AS RIPK2 INHIBITORS |
| 5-(6-(tert- butylsulfonyl)-7- methoxyimidazo[1,2- a]pyridin-3-yl)-2- (difluoromethoxy)-3- fluoroaniline | IC50 | 1.75 nM | US-20250346593: IMIDAZO(1,2-1)PYRIDINE DERIVATIVES AS RIPK2 INHIBITORS |
| 4-(6-(tert- butylsulfonyl)-7- methoxyimidazo[1,2- a]pyridin-3-yl)-3,6- difluoro-2- methylaniline | IC50 | 1.75 nM | US-20250346593: IMIDAZO(1,2-1)PYRIDINE DERIVATIVES AS RIPK2 INHIBITORS |
| 5-(5-(tert- butylsulfonyl)-6- ethoxypyrazolo[1,5- a]pyridin-3-yl)-3- chloro-6-fluoropyridin- 2-amine | IC50 | 1.75 nM | US-20250346593: IMIDAZO(1,2-1)PYRIDINE DERIVATIVES AS RIPK2 INHIBITORS |
| N-{2-methoxy-5-[7- methoxy-6-(2- methylpropane-2- sulfonyl)imidazo[1,2- a]pyridin-3- yl]phenyl}propane-1- sulfonamide | IC50 | 1.75 nM | US-20250346593: IMIDAZO(1,2-1)PYRIDINE DERIVATIVES AS RIPK2 INHIBITORS |
| N-(5-(5-(tert- butylsulfonyl)pyrazolo [1,5-a]pyridin-3-yl)-2,3- dimethoxyphenyl) propane-1-sulfonamide | IC50 | 1.75 nM | US-20250346593: IMIDAZO(1,2-1)PYRIDINE DERIVATIVES AS RIPK2 INHIBITORS |
| N-(5-(5-(tert- butylsulfonyl)-6- methoxypyrazolo[1,5- a]pyridin-3-yl)-2,3- dimethoxyphenyl) methanesulfonamide | IC50 | 1.75 nM | US-20250346593: IMIDAZO(1,2-1)PYRIDINE DERIVATIVES AS RIPK2 INHIBITORS |
| N-(4-(6-(tert- butylsulfonyl)-7- methoxyimidazo[1,2- a]pyridin-3-yl)-6- (difluoromethoxy) pyridin-2-yl)propane-1- sulfonamide | IC50 | 1.75 nM | US-20250346593: IMIDAZO(1,2-1)PYRIDINE DERIVATIVES AS RIPK2 INHIBITORS |
ChEMBL bioactivities
1002 potent at pChembl≥5 of 1016 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.96 | IC50 | 0.011 | nM | CHEMBL4531690 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL4857880 |
| 9.80 | IC50 | 0.1585 | nM | CHEMBL4866182 |
| 9.55 | Kd | 0.28 | nM | CHEMBL5177284 |
| 9.22 | IC50 | 0.6 | nM | CHEMBL5177284 |
| 9.21 | IC50 | 0.61 | nM | CHEMBL5742848 |
| 9.19 | IC50 | 0.65 | nM | CHEMBL6161949 |
| 9.11 | Kd | 0.78 | nM | CHEMBL4596287 |
| 9.10 | IC50 | 0.8 | nM | CHEMBL5187454 |
| 9.09 | IC50 | 0.81 | nM | CHEMBL5840021 |
| 9.05 | Kd | 0.9 | nM | CHEMBL400402 |
| 9.05 | IC50 | 0.9 | nM | CHEMBL6002258 |
| 9.03 | IC50 | 0.94 | nM | CHEMBL5851050 |
| 9.02 | IC50 | 0.95 | nM | CHEMBL5816850 |
| 9.00 | IC50 | 1 | nM | PONATINIB |
| 9.00 | IC50 | 1 | nM | CHEMBL5845929 |
| 9.00 | IC50 | 1 | nM | CHEMBL5951662 |
| 9.00 | IC50 | 1 | nM | CHEMBL5858920 |
| 9.00 | IC50 | 0.99 | nM | CHEMBL5768963 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL6016366 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL6034661 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL5804402 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL5983278 |
| 8.96 | IC50 | 1.1 | nM | CHEMBL5841516 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL6012062 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL5929812 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL6046857 |
| 8.92 | IC50 | 1.2 | nM | CHEMBL5932076 |
| 8.92 | IC50 | 1.21 | nM | CHEMBL129123 |
| 8.89 | IC50 | 1.3 | nM | CHEMBL4293287 |
| 8.89 | IC50 | 1.3 | nM | CHEMBL5805040 |
| 8.89 | IC50 | 1.3 | nM | CHEMBL5838688 |
| 8.89 | IC50 | 1.3 | nM | CHEMBL5948297 |
| 8.89 | IC50 | 1.3 | nM | CHEMBL5886778 |
| 8.85 | IC50 | 1.4 | nM | CHEMBL4205154 |
| 8.85 | IC50 | 1.4 | nM | CHEMBL5840021 |
| 8.85 | IC50 | 1.4 | nM | CHEMBL6061078 |
| 8.85 | IC50 | 1.4 | nM | CHEMBL5996450 |
| 8.85 | IC50 | 1.4 | nM | CHEMBL5880837 |
| 8.85 | IC50 | 1.4 | nM | CHEMBL5743037 |
| 8.84 | IC50 | 1.44 | nM | CHEMBL6160755 |
| 8.82 | IC50 | 1.5 | nM | CHEMBL6046757 |
| 8.82 | IC50 | 1.5 | nM | CHEMBL5747138 |
| 8.82 | IC50 | 1.5 | nM | CHEMBL5991605 |
| 8.82 | IC50 | 1.5 | nM | CHEMBL5771148 |
| 8.82 | IC50 | 1.5 | nM | CHEMBL5767751 |
| 8.82 | IC50 | 1.5 | nM | CHEMBL5960722 |
| 8.82 | IC50 | 1.52 | nM | CHEMBL6144386 |
| 8.80 | IC50 | 1.6 | nM | CHEMBL4282034 |
| 8.80 | IC50 | 1.585 | nM | CHEMBL4876228 |
PubChem BioAssay actives
632 with measured affinity, of 1809 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-chloro-7,10-dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.12,6.017,20]docosa-1(20),2(22),3,5,14(21),15,18-heptaene | 1638761: Displacement of fluorescent tracer from N-terminus of human RIPK2 expressed in HEK293T cells after 2 hrs by NanoBRET target engagement assay | ic50 | <0.0001 | uM |
| (5S,8S,10aR)-3-[5-[4-[3-[6-tert-butylsulfonyl-4-[(4,5-dimethyl-1H-pyrazol-3-yl)amino]quinazolin-7-yl]oxypropyl]piperazin-1-yl]pyrazine-2-carbonyl]-5-[[(2S)-2-(methylamino)propanoyl]amino]-6-oxo-N-[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]-1,2,4,5,8,9,10,10a-octahydropyrrolo[1,2-a][1,5]diazocine-8-carboxamide | 1773563: Inhibition of full length His-tagged RIPK2 (unknown origin) expressed in baculovirus expression system using fluorescent labelled ATP competitive ligand by fluorescent polarization based binding assay | ic50 | 0.0001 | uM |
| 5-[4-[3-[6-tert-butylsulfonyl-4-[(4,5-dimethyl-1H-pyrazol-3-yl)amino]quinazolin-7-yl]oxypropyl]piperazin-1-yl]-N-[(3S,5S)-1-[(2R)-3,3-dimethyl-2-[[(2R)-2-(methylamino)propanoyl]amino]butanoyl]-5-[4-(4-fluorobenzoyl)-1,3-thiazol-2-yl]pyrrolidin-3-yl]pyrazine-2-carboxamide | 1773563: Inhibition of full length His-tagged RIPK2 (unknown origin) expressed in baculovirus expression system using fluorescent labelled ATP competitive ligand by fluorescent polarization based binding assay | ic50 | 0.0002 | uM |
| 7-(4-aminocyclohexyl)-5-(2-fluoro-4-methylphenyl)pyrrolo[2,3-d]pyrimidin-4-amine | 1880919: Binding affinity to human RIPK2 in HEK293 cells | kd | 0.0003 | uM |
| 7-(4-aminocyclohexyl)-5-(1,3-benzodioxol-5-yl)pyrrolo[2,3-d]pyrimidin-4-amine | 1880875: Inhibition of human RIPK2 incubated for 120 mins in presence of [gamma33P]ATP by scintillation counting based radiometry assay | ic50 | 0.0008 | uM |
| 2-[4-(1,3-benzothiazol-5-ylamino)-6-tert-butylsulfonylquinazolin-7-yl]oxyethyl dihydrogen phosphate | 1921722: Binding affinity to RIPK2 (unknown origin) assessed as dissociation constant by kinomescan assay | kd | 0.0008 | uM |
| 4-chloro-3-[5-methyl-3-[4-(2-pyrrolidin-1-ylethoxy)anilino]-1,2,4-benzotriazin-7-yl]phenol | 1425155: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0009 | uM |
| Ponatinib | 1580373: Inhibition of recombinant human His-tagged RIPK2 (8 to 317 residues) incubated for 1 hr by ADP-Glo assay | ic50 | 0.0010 | uM |
| 6-tert-butylsulfonyl-N-(4,5-dimethyl-1H-pyrazol-3-yl)-7-methoxyquinolin-4-amine | 1422976: Inhibition of full length His/flag-tagged RIPK2 (unknown origin) expressed in baculovirus expression system using fluorescently labeled substrate incubated for 10 mins followed by substrate addition measured after 10 mins by fluorescence polarization assay | ic50 | 0.0013 | uM |
| (2S)-N-[(1S)-1-[1-[5-[4-[3-[6-tert-butylsulfonyl-4-[(4,5-dimethyl-1H-pyrazol-3-yl)amino]quinazolin-7-yl]oxypropyl]piperazin-1-yl]pyrazine-2-carbonyl]piperidin-4-yl]-2-[(2S)-2-[4-(4-fluorobenzoyl)-1,3-thiazol-2-yl]pyrrolidin-1-yl]-2-oxoethyl]-2-(methylamino)propanamide | 1773548: Protac activity at IAP/RIPK2 in human whole blood assessed as inhibition of MDP-induced TNFalpha production by ELISA | ic50 | 0.0016 | uM |
| 7-(4-aminocyclohexyl)-5-(4-fluorophenyl)pyrrolo[2,3-d]pyrimidin-4-amine | 1880875: Inhibition of human RIPK2 incubated for 120 mins in presence of [gamma33P]ATP by scintillation counting based radiometry assay | ic50 | 0.0016 | uM |
| 6-tert-butylsulfonyl-N-(4,5-dimethyl-1H-pyrazol-3-yl)-7-ethoxyquinolin-4-amine | 1422976: Inhibition of full length His/flag-tagged RIPK2 (unknown origin) expressed in baculovirus expression system using fluorescently labeled substrate incubated for 10 mins followed by substrate addition measured after 10 mins by fluorescence polarization assay | ic50 | 0.0016 | uM |
| N-(5-chloro-1,3-benzodioxol-4-yl)-7-[2-(4-methylpiperazin-1-yl)ethoxy]-5-(oxan-4-yloxy)quinazolin-4-amine | 1425155: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0020 | uM |
| 1-(2-methoxyethyl)-2-methyl-3-(pyrazin-2-ylmethyl)benzo[f]benzimidazol-3-ium-4,9-dione bromide | 2025420: Inhibition of human RIPK2 | ic50 | 0.0020 | uM |
| (2S,4S)-4-[[2-[2-[2-[2-[2-[4-(1,3-benzothiazol-5-ylamino)-6-tert-butylsulfonylquinolin-7-yl]oxyethoxy]ethoxy]ethoxy]ethoxy]acetyl]amino]-1-[(2S)-3,3-dimethyl-2-[[(2S)-2-(methylamino)propanoyl]amino]butanoyl]-N-[(1R)-1-phenylpropyl]pyrrolidine-2-carboxamide | 1773563: Inhibition of full length His-tagged RIPK2 (unknown origin) expressed in baculovirus expression system using fluorescent labelled ATP competitive ligand by fluorescent polarization based binding assay | ic50 | 0.0020 | uM |
| (2S)-N-[(1S)-1-[1-[2-[4-[3-[6-tert-butylsulfonyl-4-[(4,5-dimethyl-1H-pyrazol-3-yl)amino]quinazolin-7-yl]oxypropyl]piperazin-1-yl]pyrimidine-5-carbonyl]piperidin-4-yl]-2-[(2S)-2-[4-(4-fluorobenzoyl)-1,3-thiazol-2-yl]pyrrolidin-1-yl]-2-oxoethyl]-2-(methylamino)propanamide | 1773548: Protac activity at IAP/RIPK2 in human whole blood assessed as inhibition of MDP-induced TNFalpha production by ELISA | ic50 | 0.0020 | uM |
| N-[3-(6-tert-butylsulfonyl-7-methoxyimidazo[1,2-a]pyridin-3-yl)-5-chlorophenyl]acetamide | 1503886: Inhibition of full length RIPK2 (unknown origin) pretreated for 30 mins followed by ATP addition measured after 2 hrs by ADP-d2 tracer based fluorescence assay | ic50 | 0.0020 | uM |
| (4S)-1-[(2S)-2-[[2-[2-[2-[2-[2-[4-(1,3-benzothiazol-5-ylamino)-6-tert-butylsulfonylquinolin-7-yl]oxyethoxy]ethoxy]ethoxy]ethoxy]acetyl]amino]-3,3-dimethylbutanoyl]-4-hydroxy-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]pyrrolidine-2-carboxamide | 2137475: Protac activity at VHL/RIPK2 in human THP-1 cells assessed as RIPK2 degradation measured after 16 hrs by Western blot analysis | ic50 | 0.0020 | uM |
| N-(6-propan-2-ylsulfonylquinolin-4-yl)-1,3-benzothiazol-5-amine | 2138417: Inhibition of N-terminal polyHis-tagged human RIPK2 (8 to 310 residues) expressed in Sf9 cells using MBP as substrate preincubated for 15 mins followed by ATP addition measured after 90 mins by ADP-Glo assay | ic50 | 0.0020 | uM |
| 2-[4-(1,3-benzothiazol-5-ylamino)-6-tert-butylsulfonylquinazolin-7-yl]oxyethanol | 1638761: Displacement of fluorescent tracer from N-terminus of human RIPK2 expressed in HEK293T cells after 2 hrs by NanoBRET target engagement assay | ic50 | 0.0020 | uM |
| 7-(4-aminocyclohexyl)-5-(4-methylphenyl)pyrrolo[2,3-d]pyrimidin-4-amine | 1880875: Inhibition of human RIPK2 incubated for 120 mins in presence of [gamma33P]ATP by scintillation counting based radiometry assay | ic50 | 0.0024 | uM |
| 2-[(2R,5R)-2-[[(2R)-4-[5-[4-[3-[6-tert-butylsulfonyl-4-[(4,5-dimethyl-1H-pyrazol-3-yl)amino]quinazolin-7-yl]oxypropyl]piperazine-1-carbonyl]pyrimidin-2-yl]-2-methylpiperazin-1-yl]methyl]-5-methylpiperazin-1-yl]-1-[6-[(4-fluorophenyl)methyl]-3,3-dimethyl-2H-pyrrolo[3,2-b]pyridin-1-yl]ethanone | 1773548: Protac activity at IAP/RIPK2 in human whole blood assessed as inhibition of MDP-induced TNFalpha production by ELISA | ic50 | 0.0025 | uM |
| 6-tert-butylsulfonyl-N-(4,5-dimethyl-1H-pyrazol-3-yl)-7-ethylquinolin-4-amine | 1422976: Inhibition of full length His/flag-tagged RIPK2 (unknown origin) expressed in baculovirus expression system using fluorescently labeled substrate incubated for 10 mins followed by substrate addition measured after 10 mins by fluorescence polarization assay | ic50 | 0.0025 | uM |
| 2-[6-tert-butylsulfonyl-4-[(4,5-dimethyl-1H-pyrazol-3-yl)amino]quinolin-7-yl]oxyethanol | 1422976: Inhibition of full length His/flag-tagged RIPK2 (unknown origin) expressed in baculovirus expression system using fluorescently labeled substrate incubated for 10 mins followed by substrate addition measured after 10 mins by fluorescence polarization assay | ic50 | 0.0025 | uM |
| 6-tert-butylsulfonyl-N-(4,5-dimethyl-1H-pyrazol-3-yl)-7-(2-methoxyethoxy)quinolin-4-amine | 1422976: Inhibition of full length His/flag-tagged RIPK2 (unknown origin) expressed in baculovirus expression system using fluorescently labeled substrate incubated for 10 mins followed by substrate addition measured after 10 mins by fluorescence polarization assay | ic50 | 0.0025 | uM |
| 4-(6-tert-butylsulfonyl-7-ethoxyimidazo[1,2-a]pyridin-3-yl)-6-fluoropyridin-2-amine | 1503886: Inhibition of full length RIPK2 (unknown origin) pretreated for 30 mins followed by ATP addition measured after 2 hrs by ADP-d2 tracer based fluorescence assay | ic50 | 0.0030 | uM |
| 4-(7-ethoxy-6-propan-2-ylsulfonylimidazo[1,2-a]pyridin-3-yl)-6-fluoropyridin-2-amine | 1503886: Inhibition of full length RIPK2 (unknown origin) pretreated for 30 mins followed by ATP addition measured after 2 hrs by ADP-d2 tracer based fluorescence assay | ic50 | 0.0030 | uM |
| 7-[4-(benzylamino)cyclohexyl]-5-(4-methoxyphenyl)pyrrolo[2,3-d]pyrimidin-4-amine | 1880875: Inhibition of human RIPK2 incubated for 120 mins in presence of [gamma33P]ATP by scintillation counting based radiometry assay | ic50 | 0.0030 | uM |
| [5-[4-(1,3-benzothiazol-5-ylamino)-6-thiophen-2-ylquinazolin-7-yl]furan-2-yl]methanol | 2138417: Inhibition of N-terminal polyHis-tagged human RIPK2 (8 to 310 residues) expressed in Sf9 cells using MBP as substrate preincubated for 15 mins followed by ATP addition measured after 90 mins by ADP-Glo assay | ic50 | 0.0030 | uM |
| N-[7-chloro-6-(1-methylimidazol-2-yl)quinazolin-4-yl]-1,3-benzothiazol-5-amine | 2138417: Inhibition of N-terminal polyHis-tagged human RIPK2 (8 to 310 residues) expressed in Sf9 cells using MBP as substrate preincubated for 15 mins followed by ATP addition measured after 90 mins by ADP-Glo assay | ic50 | 0.0030 | uM |
| [3-[4-(1,3-benzothiazol-5-ylamino)thieno[2,3-d]pyrimidin-6-yl]phenyl]methanol | 2118988: Inhibition of N-terminal poly his-tagged recombinant RIPK2 (8 to 310 residues) (unknown origin) expressed in Sf9 cells preincubated for 15 mins followed by ATP addition and measured after 90 mins mins by by ADP-Glo reagent based luminescence assay | ic50 | 0.0030 | uM |
| 4-methyl-3-[(6-methylsulfonylquinolin-4-yl)amino]phenol | 1309961: Competitive inhibition of full length FLAG-His-tagged RIP2K (unknown origin) expressed in baculovirus expression system preincubated for 10 mins followed by addition of fluorescent-labeled 2-Methyl-5-(2-propen-l-yloxy)aniline measured after 10 mins by fluorescence polarization assay | ic50 | 0.0030 | uM |
| (2S)-N-[(1S)-1-[1-[2-[4-[3-[6-tert-butylsulfonyl-4-[(4,5-dimethyl-1H-pyrazol-3-yl)amino]quinazolin-7-yl]oxypropyl]piperidin-1-yl]pyrimidine-5-carbonyl]piperidin-4-yl]-2-[(2S)-2-[4-(4-fluorobenzoyl)-1,3-thiazol-2-yl]pyrrolidin-1-yl]-2-oxoethyl]-2-(methylamino)propanamide | 1773548: Protac activity at IAP/RIPK2 in human whole blood assessed as inhibition of MDP-induced TNFalpha production by ELISA | ic50 | 0.0032 | uM |
| 5-[4-[3-[6-tert-butylsulfonyl-4-[(4,5-dimethyl-1H-pyrazol-3-yl)amino]quinazolin-7-yl]oxypropyl]piperazin-1-yl]-N-[(3S,5S)-5-[(2,6-difluorophenyl)carbamoyl]-1-[(2S)-3,3-dimethyl-2-[[(2R)-2-(methylamino)propanoyl]amino]butanoyl]pyrrolidin-3-yl]pyrazine-2-carboxamide | 1773548: Protac activity at IAP/RIPK2 in human whole blood assessed as inhibition of MDP-induced TNFalpha production by ELISA | ic50 | 0.0032 | uM |
| N-(1,3-benzothiazol-5-yl)-8-cyclopropyl-6,6-dioxothieno[2,3-g]quinazolin-4-amine | 1921722: Binding affinity to RIPK2 (unknown origin) assessed as dissociation constant by kinomescan assay | kd | 0.0033 | uM |
| N-[4-[4-amino-5-(4-methoxyphenyl)pyrrolo[2,3-d]pyrimidin-7-yl]cyclohexyl]-3,4,5-trimethoxybenzamide | 1880875: Inhibition of human RIPK2 incubated for 120 mins in presence of [gamma33P]ATP by scintillation counting based radiometry assay | ic50 | 0.0039 | uM |
| 7-(4-aminocyclohexyl)-5-(4-amino-3-fluorophenyl)pyrrolo[2,3-d]pyrimidin-4-amine | 1880875: Inhibition of human RIPK2 incubated for 120 mins in presence of [gamma33P]ATP by scintillation counting based radiometry assay | ic50 | 0.0040 | uM |
| N-[7-chloro-6-(1-methylpyrazol-4-yl)quinazolin-4-yl]-1,3-benzothiazol-5-amine | 2138417: Inhibition of N-terminal polyHis-tagged human RIPK2 (8 to 310 residues) expressed in Sf9 cells using MBP as substrate preincubated for 15 mins followed by ATP addition measured after 90 mins by ADP-Glo assay | ic50 | 0.0040 | uM |
| N-(6-thiophen-2-ylquinazolin-4-yl)-1,3-benzothiazol-5-amine | 2138417: Inhibition of N-terminal polyHis-tagged human RIPK2 (8 to 310 residues) expressed in Sf9 cells using MBP as substrate preincubated for 15 mins followed by ATP addition measured after 90 mins by ADP-Glo assay | ic50 | 0.0040 | uM |
| N-[6-(2-methyl-1,3-thiazol-5-yl)quinazolin-4-yl]-1,3-benzothiazol-5-amine | 2138417: Inhibition of N-terminal polyHis-tagged human RIPK2 (8 to 310 residues) expressed in Sf9 cells using MBP as substrate preincubated for 15 mins followed by ATP addition measured after 90 mins by ADP-Glo assay | ic50 | 0.0040 | uM |
| N-[6-(1-methylpyrazol-4-yl)quinazolin-4-yl]-1,3-benzothiazol-5-amine | 2138417: Inhibition of N-terminal polyHis-tagged human RIPK2 (8 to 310 residues) expressed in Sf9 cells using MBP as substrate preincubated for 15 mins followed by ATP addition measured after 90 mins by ADP-Glo assay | ic50 | 0.0040 | uM |
| N-[6-(3-methylimidazol-4-yl)quinazolin-4-yl]-1,3-benzothiazol-5-amine | 2138417: Inhibition of N-terminal polyHis-tagged human RIPK2 (8 to 310 residues) expressed in Sf9 cells using MBP as substrate preincubated for 15 mins followed by ATP addition measured after 90 mins by ADP-Glo assay | ic50 | 0.0040 | uM |
| [3-[4-(1,3-benzothiazol-5-ylamino)-6-(3-methylthiophen-2-yl)quinazolin-7-yl]phenyl]methanol | 2138417: Inhibition of N-terminal polyHis-tagged human RIPK2 (8 to 310 residues) expressed in Sf9 cells using MBP as substrate preincubated for 15 mins followed by ATP addition measured after 90 mins by ADP-Glo assay | ic50 | 0.0040 | uM |
| N-(1,3-benzothiazol-5-yl)-6-(1-methylpyrazol-4-yl)thieno[2,3-d]pyrimidin-4-amine | 2118988: Inhibition of N-terminal poly his-tagged recombinant RIPK2 (8 to 310 residues) (unknown origin) expressed in Sf9 cells preincubated for 15 mins followed by ATP addition and measured after 90 mins mins by by ADP-Glo reagent based luminescence assay | ic50 | 0.0040 | uM |
| N-(1,3-benzothiazol-5-yl)-6-(3-methylimidazol-4-yl)thieno[2,3-d]pyrimidin-4-amine | 2118988: Inhibition of N-terminal poly his-tagged recombinant RIPK2 (8 to 310 residues) (unknown origin) expressed in Sf9 cells preincubated for 15 mins followed by ATP addition and measured after 90 mins mins by by ADP-Glo reagent based luminescence assay | ic50 | 0.0040 | uM |
| N-(6-tert-butylsulfonyl-7-methoxyquinazolin-4-yl)-1,3-benzothiazol-5-amine | 1569497: Inhibition of fluorescent-labelled ligand binding to human RIP2K preincubated for 10 mins followed by fluorescent-labelled ligand addition and measured after 10 mins by fluorescence polarization assay | ic50 | 0.0040 | uM |
| 7-(4-aminocyclohexyl)-5-(4-methoxyphenyl)pyrrolo[2,3-d]pyrimidin-4-amine | 1880875: Inhibition of human RIPK2 incubated for 120 mins in presence of [gamma33P]ATP by scintillation counting based radiometry assay | ic50 | 0.0042 | uM |
| Vandetanib | 435935: Binding constant for RIPK2 kinase domain | kd | 0.0046 | uM |
| 6-(2,6-dichlorophenyl)-2-[4-[2-(diethylamino)ethoxy]anilino]-8-(2-methylpropyl)pyrido[2,3-d]pyrimidin-7-one | 1756906: Inhibition of recombinant RIPK2 (unknown origin) using RS repeat peptide as substrate preincubated for 5 mins followed by substrate and ATP addition and further incubated for 2 hrs by ADP-Glo reagent based assay | ic50 | 0.0050 | uM |
| 1-[6-(3,5-dichloro-4-hydroxyphenyl)-4-[[4-[(dimethylamino)methyl]cyclohexyl]amino]-1,5-naphthyridin-3-yl]ethanone | 1425155: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0050 | uM |
CTD chemical–gene interactions
86 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases expression | 2 |
| sodium arsenite | increases expression, decreases expression, affects reaction | 2 |
| Doxorubicin | decreases expression, affects response to substance | 2 |
| Estradiol | affects expression, decreases reaction, increases expression | 2 |
| Valproic Acid | decreases methylation, increases expression | 2 |
| Cyclosporine | increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| GSK-J4 | increases expression | 1 |
| FR900359 | decreases phosphorylation | 1 |
| immune checkpoint inhibitor BMS-1 | affects cotreatment, decreases expression | 1 |
| dicrotophos | decreases expression | 1 |
| tungsten carbide | affects cotreatment, decreases expression | 1 |
| methylmercuric chloride | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| propylparaben | increases expression | 1 |
| pirinixic acid | decreases reaction, increases expression | 1 |
| VX-agent | increases expression | 1 |
| 2-methyl-4-isothiazolin-3-one | increases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| nickel chloride | increases expression | 1 |
| zinc chromate | increases abundance, increases expression | 1 |
| chloroquine diphosphate | decreases expression | 1 |
| ochratoxin A | decreases acetylation, decreases expression | 1 |
| nickel sulfate | increases expression | 1 |
| coumarin | decreases phosphorylation | 1 |
| S-(1,2-dichlorovinyl)cysteine | increases expression, affects response to substance | 1 |
| beta-methylcholine | affects expression | 1 |
| cordycepin | decreases expression, affects cotreatment | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| usnic acid | increases expression | 1 |
ChEMBL screening assays
455 unique, capped per target: 452 binding, 3 admet
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4026936 | Binding | Proteolysis targeting chimera activity in human THP1 cells assessed as induction of VHL-mediated delivery of RIPK2 for protein degradation by proteasome by measuring drug level causing 50% cellular protein depletion incubated for 16 hrs by | Protac-Induced Protein Degradation in Drug Discovery: Breaking the Rules or Just Making New Ones? — J Med Chem |
| CHEMBL4344881 | ADMET | Displacement of fluorescein labeled probe from full length human GST-tagged RIPK2 expressed in Sf9 cells incubated for 60 mins by HTRF assay | Identification of RIPK3 Type II Inhibitors Using High-Throughput Mechanistic Studies in Hit Triage. — ACS Med Chem Lett |
Cellosaurus cell lines
3 cell lines: 2 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B2DU | Abcam HeLa RIPK2 KO | Cancer cell line | Female |
| CVCL_D9QK | Ubigene HEK293 RIPK2 KO | Transformed cell line | Female |
| CVCL_TJ12 | HAP1 RIPK2 (-) | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Targeted by drugs: Ponatinib
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): Crohn disease, leprosy, leprosy, susceptibility to, 1