RIPOR3-AS1

Summary

RIPOR3-AS1 (RIPOR3 antisense RNA 1, HGNC:40760) is a long non-coding RNA gene on chromosome 20q13.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40760
Approved symbol	RIPOR3-AS1
Name	RIPOR3 antisense RNA 1
Location	20q13.13
Locus type	RNA, long non-coding
Status	Approved
Aliases	sin-lncRNA
Ensembl gene	ENSG00000234693
Ensembl biotype	lncRNA
Entrez	100506175
RNAcentral	URS00003ACF28 — lncRNA, 638 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000435177, ENST00000452336, ENST00000744029

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000435177 — 4 exons

Exon	Start	End
ENSE00001595592	50653946	50653995
ENSE00001722225	50659866	50660078
ENSE00004082997	50653149	50653222
ENSE00004082999	50662021	50662299

Expression profiles

Bgee: expression breadth ubiquitous, 108 present calls, max score 95.75.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0276 / max 26.0137, expressed in 8 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
185263	0.0276	8

Top tissues by expression

209 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	95.75	silver quality
pancreatic ductal cell	CL:0002079	92.11	silver quality
tibialis anterior	UBERON:0001385	78.65	silver quality
kidney epithelium	UBERON:0004819	76.05	gold quality
epithelial cell of pancreas	CL:0000083	74.23	gold quality
upper arm skin	UBERON:0004263	73.18	gold quality
cardiac muscle of right atrium	UBERON:0003379	73.08	gold quality
left ventricle myocardium	UBERON:0006566	72.94	gold quality
buccal mucosa cell	CL:0002336	70.85	silver quality
right lobe of liver	UBERON:0001114	70.37	gold quality
myocardium	UBERON:0002349	69.25	gold quality
nasal cavity epithelium	UBERON:0005384	69.21	gold quality
ileal mucosa	UBERON:0000331	68.02	silver quality
deltoid	UBERON:0001476	67.68	gold quality
cartilage tissue	UBERON:0002418	66.66	silver quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	65.83	gold quality
sperm	CL:0000019	64.96	gold quality
vena cava	UBERON:0004087	64.83	gold quality
liver	UBERON:0002107	64.40	gold quality
quadriceps femoris	UBERON:0001377	63.89	gold quality
layer of synovial tissue	UBERON:0007616	63.69	gold quality
bone marrow	UBERON:0002371	63.45	gold quality
upper leg skin	UBERON:0004262	62.34	silver quality
vastus lateralis	UBERON:0001379	62.11	gold quality
biceps brachii	UBERON:0001507	61.74	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.41	gold quality
skeletal muscle tissue	UBERON:0001134	61.39	gold quality
nasal cavity mucosa	UBERON:0001826	61.07	gold quality
nipple	UBERON:0002030	60.90	gold quality
trabecular bone tissue	UBERON:0002483	60.54	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.74

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.