RNA5S1

Summary

RNA5S1 (RNA, 5S ribosomal 1, HGNC:34362) is a ribosomal RNA gene on chromosome 1q42.13.

Predicted to be a structural constituent of ribosome. Predicted to be located in ribosome.

Source: NCBI Gene 100169751 — RefSeq curated summary.

At a glance

• Gene type: non-coding (rRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:34362
Approved symbol	RNA5S1
Name	RNA, 5S ribosomal 1
Location	1q42.13
Locus type	RNA, ribosomal
Status	Approved
Ensembl gene	ENSG00000199352
Ensembl biotype	rRNA
Entrez	100169751
RNAcentral	URS00000F9D45 — rRNA, 121 nt, 8 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 rRNA

ENST00000362482

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000362482 — 1 exons

Exon	Start	End
ENSE00001808929	228610268	228610386

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 99.93.

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	99.93	gold quality
adrenal tissue	UBERON:0018303	93.89	gold quality
skeletal muscle tissue	UBERON:0001134	90.62	gold quality
monocyte	CL:0000576	89.33	gold quality
putamen	UBERON:0001874	86.39	gold quality
caudate nucleus	UBERON:0001873	83.81	gold quality
calcaneal tendon	UBERON:0003701	83.58	gold quality
amygdala	UBERON:0001876	82.42	gold quality
granulocyte	CL:0000094	82.28	gold quality
nucleus accumbens	UBERON:0001882	81.37	gold quality
blood	UBERON:0000178	80.22	gold quality
Ammon’s horn	UBERON:0001954	79.59	gold quality
anterior cingulate cortex	UBERON:0009835	78.41	gold quality
hypothalamus	UBERON:0001898	77.91	gold quality
brain	UBERON:0000955	77.49	gold quality
liver	UBERON:0002107	77.28	gold quality
cerebral cortex	UBERON:0000956	75.85	gold quality
right hemisphere of cerebellum	UBERON:0014890	75.83	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	75.44	gold quality
kidney	UBERON:0002113	75.44	gold quality
cerebellar hemisphere	UBERON:0002245	74.49	gold quality
frontal cortex	UBERON:0001870	74.15	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	74.02	gold quality
right frontal lobe	UBERON:0002810	73.91	gold quality
endometrium	UBERON:0001295	73.90	gold quality
adult mammalian kidney	UBERON:0000082	73.72	gold quality
body of pancreas	UBERON:0001150	73.70	gold quality
lower esophagus mucosa	UBERON:0035834	73.70	gold quality
mucosa of transverse colon	UBERON:0004991	72.42	gold quality
left ovary	UBERON:0002119	72.22	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Paralogs (38): RNA5S12 (ENSG00000199270), RNA5S11 (ENSG00000199334), RNA5S3 (ENSG00000199337), RNA5S5 (ENSG00000199396), RNA5SP150 (ENSG00000199839), RNA5S10 (ENSG00000199910), RNA5SP443 (ENSG00000199953), RNA5S8 (ENSG00000200343), RNA5S17 (ENSG00000200370), RNA5S4 (ENSG00000200381), RNA5S6 (ENSG00000200624), RNA5SP524 (ENSG00000201285), RNA5S9 (ENSG00000201321), RNA5S14 (ENSG00000201355), RNA5SP194 (ENSG00000201532), RNA5S2 (ENSG00000201588), RNA5S15 (ENSG00000201925), RNA5SP172 (ENSG00000201931), RNA5S16 (ENSG00000202257), RNA5S7 (ENSG00000202521), RNA5S13 (ENSG00000202526), RNA5SP525 (ENSG00000212595), RNA5SP533 (ENSG00000252830), RNA5SP534 (ENSG00000274059), RNA5SP535 (ENSG00000274097), RNA5SP536 (ENSG00000274408), RNA5SP526 (ENSG00000274663), RNA5SP527 (ENSG00000274759), RNA5SP528 (ENSG00000275305), RNA5SP529 (ENSG00000276442), 5S_rRNA (ENSG00000276861), RNA5SP530 (ENSG00000277049), 5S_rRNA (ENSG00000277411), RNA5SP531 (ENSG00000277418), 5S_rRNA (ENSG00000277488), (ENSG00000278457), RNA5SP532 (ENSG00000283433), RNA5SP343 (ENSG00000284736)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.