RNF32-DT

Summary

RNF32-DT (RNF32 divergent transcript, HGNC:48971) is a long non-coding RNA gene on chromosome 7q36.3.

Predicted to be located in cytoplasm and membrane.

Source: NCBI Gene 100506380 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48971
Approved symbol	RNF32-DT
Name	RNF32 divergent transcript
Location	7q36.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	MY040
Ensembl gene	ENSG00000182648
Ensembl biotype	lncRNA
OMIM	610242
Entrez	100506380
RNAcentral	URS0000D78048 — lncRNA, 3350 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 40 — 40 lncRNA

ENST00000333319, ENST00000418309, ENST00000425712, ENST00000426187, ENST00000435354, ENST00000436670, ENST00000440711, ENST00000447933, ENST00000458645, ENST00000624071, ENST00000651649, ENST00000652322, ENST00000656505, ENST00000656672, ENST00000656837, ENST00000656928, ENST00000660473, ENST00000661282, ENST00000661405, ENST00000661595, ENST00000663891, ENST00000664734, ENST00000671433, ENST00000831964, ENST00000831965, ENST00000831966, ENST00000831967, ENST00000831968, ENST00000831969, ENST00000831970, ENST00000831971, ENST00000831972, ENST00000831973, ENST00000831974, ENST00000831975, ENST00000831976, ENST00000831977, ENST00000831978, ENST00000831979, ENST00000831980

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000333319 — 1 exons

Exon	Start	End
ENSE00001512931	156638363	156640654

Expression profiles

Bgee: expression breadth ubiquitous, 195 present calls, max score 91.92.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 8.2362 / max 82.1518, expressed in 1605 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
87052	8.2362	1605

Top tissues by expression

249 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
secondary oocyte	CL:0000655	91.92	gold quality
oocyte	CL:0000023	89.75	gold quality
cortical plate	UBERON:0005343	86.52	gold quality
sural nerve	UBERON:0015488	86.37	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	85.61	gold quality
mucosa of transverse colon	UBERON:0004991	85.14	gold quality
ganglionic eminence	UBERON:0004023	84.15	gold quality
kidney epithelium	UBERON:0004819	83.85	gold quality
left testis	UBERON:0004533	83.25	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.24	gold quality
right testis	UBERON:0004534	83.07	gold quality
body of stomach	UBERON:0001161	83.02	gold quality
right lobe of liver	UBERON:0001114	82.96	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	82.61	gold quality
testis	UBERON:0000473	81.70	gold quality
tibial nerve	UBERON:0001323	81.64	gold quality
ventricular zone	UBERON:0003053	81.61	gold quality
stomach	UBERON:0000945	81.54	gold quality
prefrontal cortex	UBERON:0000451	81.40	gold quality
nucleus accumbens	UBERON:0001882	81.27	gold quality
epithelial cell of pancreas	CL:0000083	81.25	gold quality
gall bladder	UBERON:0002110	81.22	gold quality
metanephros cortex	UBERON:0010533	81.22	gold quality
endothelial cell	CL:0000115	80.99	silver quality
spinal cord	UBERON:0002240	80.92	gold quality
putamen	UBERON:0001874	80.91	gold quality
transverse colon	UBERON:0001157	80.53	gold quality
rectum	UBERON:0001052	80.50	gold quality
amygdala	UBERON:0001876	80.41	gold quality
upper arm skin	UBERON:0004263	80.27	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.66

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 2)

• LINC01006 levels in cancer tissues were significantly lower than those in adjacent normal tissues and healthy control tissues. (PMID:29060927)
• LncRNA LncOGD-1006 alleviates OGD-induced ischemic brain injury regulating apoptosis through miR-184-5p/CAAP1 axis. (PMID:33336752)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.