ROR1
gene geneOn this page
Summary
ROR1 (receptor tyrosine kinase like orphan receptor 1, HGNC:10256) is a protein-coding gene on chromosome 1p31.3, encoding Inactive tyrosine-protein kinase transmembrane receptor ROR1 (Q01973). Has very low kinase activity in vitro and is unlikely to function as a tyrosine kinase in vivo.
This gene encodes a receptor tyrosine kinase-like orphan receptor that modulates neurite growth in the central nervous system. The encoded protein is a glycosylated type I membrane protein that belongs to the ROR subfamily of cell surface receptors. It is a pseudokinase that lacks catalytic activity and may interact with the non-canonical Wnt signalling pathway. This gene is highly expressed during early embryonic development but expressed at very low levels in adult tissues. Increased expression of this gene is associated with B-cell chronic lymphocytic leukaemia. Alternative splicing results in multiple transcript variants encoding different isoforms.
Source: NCBI Gene 4919 — RefSeq curated summary.
At a glance
- Gene–disease (curated): hearing loss, autosomal recessive 108 (Moderate, GenCC) — +2 more curated relationships
- Clinical variants (ClinVar): 290 total — 1 pathogenic
- Druggable target: yes
- MANE Select transcript:
NM_005012
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:10256 |
| Approved symbol | ROR1 |
| Name | receptor tyrosine kinase like orphan receptor 1 |
| Location | 1p31.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000185483 |
| Ensembl biotype | protein_coding |
| OMIM | 602336 |
| Entrez | 4919 |
Gene structure
Transcript identifiers
Ensembl transcripts: 3 — 2 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000371079, ENST00000371080, ENST00000482426
RefSeq mRNA: 2 — MANE Select: NM_005012
NM_001083592, NM_005012
CCDS: CCDS41344, CCDS626
Canonical transcript exons
ENST00000371079 — 9 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001454303 | 64177428 | 64181498 |
| ENSE00001454305 | 63774017 | 63774508 |
| ENSE00003516915 | 64050686 | 64050716 |
| ENSE00003538526 | 64137369 | 64137496 |
| ENSE00003553651 | 64049691 | 64049978 |
| ENSE00003559494 | 64009305 | 64009376 |
| ENSE00003719568 | 64158981 | 64159192 |
| ENSE00003735973 | 64142405 | 64142650 |
| ENSE00003746077 | 64140109 | 64140426 |
Expression profiles
Bgee: expression breadth ubiquitous, 213 present calls, max score 83.40.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 6.4138 / max 130.4036, expressed in 1109 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 3196 | 6.0786 | 1102 |
| 3197 | 0.1737 | 84 |
| 3198 | 0.1615 | 73 |
Top tissues by expression
288 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| germinal epithelium of ovary | UBERON:0001304 | 83.40 | gold quality |
| popliteal artery | UBERON:0002250 | 82.98 | gold quality |
| tibial artery | UBERON:0007610 | 82.97 | gold quality |
| islet of Langerhans | UBERON:0000006 | 81.96 | gold quality |
| right coronary artery | UBERON:0001625 | 81.81 | gold quality |
| lower lobe of lung | UBERON:0008949 | 81.16 | gold quality |
| aorta | UBERON:0000947 | 81.00 | gold quality |
| saphenous vein | UBERON:0007318 | 81.00 | gold quality |
| blood vessel layer | UBERON:0004797 | 79.90 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 79.58 | gold quality |
| sural nerve | UBERON:0015488 | 79.29 | gold quality |
| buccal mucosa cell | CL:0002336 | 78.80 | gold quality |
| thoracic aorta | UBERON:0001515 | 78.41 | gold quality |
| ascending aorta | UBERON:0001496 | 78.11 | gold quality |
| left coronary artery | UBERON:0001626 | 77.24 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 77.05 | gold quality |
| coronary artery | UBERON:0001621 | 76.92 | gold quality |
| parietal pleura | UBERON:0002400 | 76.82 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 76.79 | gold quality |
| colonic epithelium | UBERON:0000397 | 76.21 | gold quality |
| stomach | UBERON:0000945 | 76.07 | gold quality |
| lung | UBERON:0002048 | 75.87 | gold quality |
| pancreas | UBERON:0001264 | 75.56 | gold quality |
| skin of hip | UBERON:0001554 | 75.25 | gold quality |
| gall bladder | UBERON:0002110 | 75.09 | gold quality |
| body of stomach | UBERON:0001161 | 74.90 | gold quality |
| ventricular zone | UBERON:0003053 | 74.79 | gold quality |
| endocervix | UBERON:0000458 | 74.74 | gold quality |
| heart | UBERON:0000948 | 74.19 | gold quality |
| pleura | UBERON:0000977 | 73.99 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-119 | yes | 14.63 |
| E-ANND-3 | yes | 5.40 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
208 targeting ROR1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-450A-1-3P | 100.00 | 69.33 | 1837 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-188-3P | 100.00 | 68.76 | 1240 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-3064-3P | 100.00 | 70.09 | 1254 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-4534 | 99.99 | 66.58 | 1907 |
| HSA-MIR-27A-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-27B-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-9985 | 99.98 | 72.11 | 2939 |
| HSA-MIR-103A-3P | 99.98 | 69.14 | 1595 |
| HSA-MIR-107 | 99.98 | 69.14 | 1595 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-8068 | 99.98 | 73.85 | 2376 |
Literature-anchored findings (GeneRIF, showing 40)
- investigation of mutations in GCL modifier subunit and the GCL catalytic subunit that modify catalytic activity and lower glutathione levels (PMID:12954617)
- overexpression of GCLm extended the mean life span only up to 24% (PMID:16148000)
- The ROR1 protein modulates the growth of neurites as well as their branching pattern in hippocampal neurons. (PMID:15654020)
- finsings show ROR1 protein is selectively expressed on the surface of B-cell chronic lymphocytic leukemia (B-CLL) cells, whereas normal B cells, other normal blood cells, and normal adult tissues do not express cell surface ROR1 (PMID:18223214)
- ROR1 is an oncofetal surface antigen and survival-signaling receptor in chronic lymphocytic leukemia. (PMID:18287027)
- Overexpression of orphan receptor tyrosine kinase Ror1 is associated with acute lymphoblastic leukemia (PMID:18354269)
- The majority of CLL cells exhibited Ror1 surface expression (71% mean; range 36-92%). Two different variants of the Ror1 protein, 105 and 130 kDa, were identified. (PMID:18546292)
- expression of ROR1 and WT1 in B-ALL is associated with the differentiation stage of the leukemic cells (PMID:18604725)
- results indicate that ROR1 expression is not limited to chronic lymphoid leukaemia cases, but it is more prevalent in non-Hodgkin lymphomas (PMID:20597086)
- Data suggest that constitutively activated Stat3 binds to the ROR1 promoter and activates ROR1 in CLL cells. (PMID:20686606)
- ROR1 has characteristics of an oncofetal gene and is expressed in undifferentiated embryonic stem cells, B-cell chronic lymphocytic leukemia and mantle cell lymphoma, but not in major adult tissues. (PMID:20702778)
- Detection of a high level of ROR1 expression in blood cells might assist in early detection of renal malignancies. (PMID:21079657)
- Ror1 undergoes complex post-translational modifications by glycosylation and mono-ubiquitination. These modifications regulate Ror1 localization and signalling, and are highly variable among individual chronic lymphocytic leukemia patients. (PMID:21481194)
- Findings suggest a critical role for Ror1 in malignant phenotypes sustained by the Met oncogene. (PMID:21487037)
- ROR1 is uniformly and highly expressed in all in chronic lymphocytic leukemia (CLL) cases at initial diagnosis and can serve as a diagnostic tool. (PMID:21531460)
- A panel of mAbs demonstrated high affinity and specificity for a diverse set of epitopes that involve all three extracellular domains of ROR1, are accessible on the cell surface, and mediate internalization (PMID:21698301)
- ROR1 is expressed on hematogones (non-neoplastic human B-lymphocyte precursors) and a minority of precursor-B acute lymphoblastic leukemia. (PMID:21813176)
- nuclear-localized ROR1 may play an important role in cell migration and cytoskeleton remodeling (PMID:22199287)
- ROR1 was overexpressed in acute lymphoblastic leukemia (PMID:22369092)
- ROR1 is expressed in human breast cancers and has biological and clinical significance (PMID:22403610)
- that the receptor tyrosine kinase ROR1 was overexpressed in most patients with various hematological malignancies of both lymphoid and myeloid origins. (PMID:22988987)
- Many different human cancers express ROR1 and ROR1 may play a functional role in promoting tumor cell growth. (PMID:23041612)
- t(1;19) Acute Lymphoblastic Leukemia cells universally exhibit expression of and dependence on the cell surface receptor ROR1. (PMID:23153538)
- cell surface expression in pediatric B-ALL along with its virtual absence from normal tissues and circulating cells makes ROR1 a promising target for mAb-based therapies. (PMID:23285131)
- Our results show that customizing spacer design and increasing affinity of ROR1-CARs enhances T-cell effector function and recognition of ROR1(+) tumors. (PMID:23620405)
- Data indicate that type I receptor tyrosine kinase-like orphan receptor ROR1 may regulate EMT and metastasis and that antibodies targeting ROR1 can inhibit cancer progression and metastasis. (PMID:23771907)
- Data shows that ROR1 and ROR2 are inversely expressed in melanomas and negatively regulate each other. Also, hypoxia initiates a shift of ROR1-positive melanomas to a more invasive, ROR2-positive phenotype. (PMID:24104062)
- CLL cells expressed different isoforms of ROR1. (PMID:24205204)
- ROR1 can interact with TCL1 and enhance leukemogenesis in Emu-TCL1 transgenic mice. (PMID:24379361)
- ROR1 is only detectable in embryonic tissue and generally absent in adult tissue, making the protein an ideal drug target for cancer therapy. [Review] (PMID:24752542)
- Human ROR1 and ROR2 are receptor tyrosine kinase-like pseudokinases. (PMID:25029443)
- ROR1 expression is correlated with malignant attributes of ovarian cancer and it may serve as a novel prognostic marker in ovarian cancer. (PMID:25056203)
- Data indicate that shRNA silencing of type I receptor tyrosine kinase-like orphan receptor (ROR1) cells, or treatment with anti-ROR1 mAb UC-961 impaired the capacity of ovarian cancer cells to form spheroids or tumor xenografts. (PMID:25411317)
- The newly developed OSU-2S delivery using ROR1-directed immunonanoparticles provide selective targeting of OSU-2S to MCL and other ROR1(+) malignancies, sparing normal B cells. (PMID:25937048)
- Significantly down-regulates the activity of the PI3K/AKT/mTOR signaling pathway. (PMID:25978653)
- Both IGF1R and ROR1 can be effectively targeted by SB modified CAR T cells. (PMID:26173023)
- High expression of ROR1 (63%), pAkt (36%), and pCREB (20%) was observed in gastric adenocarcinomas, and expression of these proteins was well intercorrelated. (PMID:26245996)
- Data show that ROR1 contributes to melanoma progression by promoting cell growth and migration. (PMID:26509654)
- Data show that silencing receptor tyrosine kinases (RTKs) ROR2 and ROR1 has a strong inhibitory effect on the ability of ovarian cancer cells to proliferate, migrate and invade. (PMID:26515598)
- Data show that the majority of chronic lymphocytic leukemia (CLL) patients had antibodies against receptor tyrosine kinase ROR1. (PMID:26562161)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ror1 | ENSDARG00000015176 |
| mus_musculus | Ror1 | ENSMUSG00000035305 |
| rattus_norvegicus | Ror1 | ENSRNOG00000029449 |
Paralogs (53): INSRR (ENSG00000027644), MUSK (ENSG00000030304), FLT4 (ENSG00000037280), EPHA3 (ENSG00000044524), ROS1 (ENSG00000047936), LTK (ENSG00000062524), ERBB3 (ENSG00000065361), TIE1 (ENSG00000066056), FGFR2 (ENSG00000066468), FGFR3 (ENSG00000068078), EPHA8 (ENSG00000070886), FGFR1 (ENSG00000077782), EPHA6 (ENSG00000080224), TYRO3 (ENSG00000092445), FLT1 (ENSG00000102755), MET (ENSG00000105976), EPHB6 (ENSG00000106123), PDGFRB (ENSG00000113721), EPHA4 (ENSG00000116106), TEK (ENSG00000120156), FLT3 (ENSG00000122025), KDR (ENSG00000128052), EPHB2 (ENSG00000133216), PDGFRA (ENSG00000134853), EPHA7 (ENSG00000135333), IGF1R (ENSG00000140443), NTRK3 (ENSG00000140538), ERBB2 (ENSG00000141736), EPHA2 (ENSG00000142627), EPHA5 (ENSG00000145242), EGFR (ENSG00000146648), EPHA1 (ENSG00000146904), NTRK2 (ENSG00000148053), MERTK (ENSG00000153208), EPHB1 (ENSG00000154928), KIT (ENSG00000157404), FGFR4 (ENSG00000160867), DDR2 (ENSG00000162733), RYK (ENSG00000163785), MST1R (ENSG00000164078)
Protein
Protein identifiers
Inactive tyrosine-protein kinase transmembrane receptor ROR1 — Q01973 (reviewed: Q01973)
Alternative names: Neurotrophic tyrosine kinase, receptor-related 1
All UniProt accessions (1): Q01973
UniProt curated annotations — full annotation on UniProt →
Function. Has very low kinase activity in vitro and is unlikely to function as a tyrosine kinase in vivo. Receptor for ligand WNT5A which activate downstream NFkB signaling pathway and may result in the inhibition of WNT3A-mediated signaling. In inner ear, crucial for spiral ganglion neurons to innervate auditory hair cells. Via IGFBP5 ligand, forms a complex with ERBB2 to enhance CREB oncogenic signaling.
Subunit / interactions. Interacts with ERBB2 and IGFBP5.
Subcellular location. Membrane. Cell projection. Axon.
Tissue specificity. Expressed strongly in human heart, lung and kidney, but weakly in the CNS. Isoform Short is strongly expressed in fetal and adult CNS and in a variety of human cancers, including those originating from CNS or PNS neuroectoderm.
Disease relevance. Deafness, autosomal recessive, 108 (DFNB108) [MIM:617654] A form of non-syndromic sensorineural hearing loss. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q01973-1 | Long | yes |
| Q01973-2 | Short, T-ROR1 | |
| Q01973-3 | 3 |
RefSeq proteins (2): NP_001077061, NP_005003* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000001 | Kringle | Domain |
| IPR000719 | Prot_kinase_dom | Domain |
| IPR001245 | Ser-Thr/Tyr_kinase_cat_dom | Domain |
| IPR003598 | Ig_sub2 | Domain |
| IPR003599 | Ig_sub | Domain |
| IPR007110 | Ig-like_dom | Domain |
| IPR008266 | Tyr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR013098 | Ig_I-set | Domain |
| IPR013783 | Ig-like_fold | Homologous_superfamily |
| IPR013806 | Kringle-like | Homologous_superfamily |
| IPR016247 | Tyr_kinase_rcpt_ROR | Family |
| IPR018056 | Kringle_CS | Conserved_site |
| IPR020067 | Frizzled_dom | Domain |
| IPR036179 | Ig-like_dom_sf | Homologous_superfamily |
| IPR036790 | Frizzled_dom_sf | Homologous_superfamily |
| IPR038178 | Kringle_sf | Homologous_superfamily |
| IPR050122 | RTK | Family |
Pfam: PF00051, PF01392, PF07679, PF07714
Enzyme classification (BRENDA):
- EC 2.7.10.1 — receptor protein-tyrosine kinase (BRENDA: 44 organisms, 214 substrates, 574 inhibitors, 11 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
4 substrates with measured Km, best-characterized 4. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.0011–0.129 | 4 |
| AC-DYFE-6-CHLORO-W-NHME | 0.0051 | 1 |
| AC-DYFGW-NHME | 0.07 | 1 |
| YFEW | 0.232 | 1 |
UniProt features (77 total): helix 17, strand 13, sequence variant 10, disulfide bond 9, compositionally biased region 4, glycosylation site 4, domain 4, splice variant 3, region of interest 2, binding site 2, topological domain 2, turn 2, signal peptide 1, chain 1, modified residue 1, transmembrane region 1, mutagenesis site 1
Structure
Experimental structures (PDB)
5 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7TNG | X-RAY DIFFRACTION | 1.4 |
| 6BA5 | X-RAY DIFFRACTION | 1.62 |
| 6TU9 | X-RAY DIFFRACTION | 1.94 |
| 6BAN | X-RAY DIFFRACTION | 1.95 |
| 5Z55 | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q01973-F1 | 69.17 | 0.26 |
Antibody-complex structures (SAbDab): 2 — 6BA5, 6BAN
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (2): 479–487; 506
Post-translational modifications (1): 645
Disulfide bonds (9): 79–131, 170–235, 178–228, 219–260, 248–296, 252–282, 313–391, 334–374, 362–386
Glycosylation sites (4): 47, 66, 184, 315
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 482 | no effect on kinase activity. |
Function
Pathways and Gene Ontology
Reactome pathways
5 pathways
| ID | Pathway |
|---|---|
| R-HSA-5140745 | WNT5A-dependent internalization of FZD2, FZD5 and ROR2 |
| R-HSA-162582 | Signal Transduction |
| R-HSA-195721 | Signaling by WNT |
| R-HSA-3858494 | Beta-catenin independent WNT signaling |
| R-HSA-4086400 | PCP/CE pathway |
MSigDB gene sets: 251 (showing top):
GSE45365_NK_CELL_VS_CD8A_DC_MCMV_INFECTION_UP, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, FREAC2_01, BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, XU_GH1_AUTOCRINE_TARGETS_UP, GOBP_SENSORY_PERCEPTION_OF_MECHANICAL_STIMULUS, MODULE_64, GOBP_CANONICAL_NF_KAPPAB_SIGNAL_TRANSDUCTION, MAZ_Q6, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, AAAYRNCTG_UNKNOWN, MODULE_66, GOBP_EAR_DEVELOPMENT
GO Biological Process (9): cell surface receptor protein tyrosine kinase signaling pathway (GO:0007169), sensory perception of sound (GO:0007605), cell population proliferation (GO:0008283), astrocyte development (GO:0014002), positive regulation of canonical NF-kappaB signal transduction (GO:0043123), inner ear development (GO:0048839), obsolete positive regulation of NF-kappaB transcription factor activity (GO:0051092), protein phosphorylation (GO:0006468), Wnt signaling pathway (GO:0016055)
GO Molecular Function (11): transmembrane receptor protein tyrosine kinase activity (GO:0004714), ATP binding (GO:0005524), coreceptor activity (GO:0015026), Wnt-protein binding (GO:0017147), signaling receptor activity (GO:0038023), Wnt receptor activity (GO:0042813), nucleotide binding (GO:0000166), protein kinase activity (GO:0004672), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (9): stress fiber (GO:0001725), cytoplasm (GO:0005737), plasma membrane (GO:0005886), cell surface (GO:0009986), axon (GO:0030424), signaling receptor complex (GO:0043235), axon terminus (GO:0043679), membrane (GO:0016020), cell projection (GO:0042995)
Reactome top-level categories
Rollup of top-4 pathways:
| Category | Pathways |
|---|---|
| PCP/CE pathway | 1 |
| Signal Transduction | 1 |
| Signaling by WNT | 1 |
| Beta-catenin independent WNT signaling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| enzyme-linked receptor protein signaling pathway | 1 |
| sensory perception of mechanical stimulus | 1 |
| cellular process | 1 |
| glial cell development | 1 |
| astrocyte differentiation | 1 |
| canonical NF-kappaB signal transduction | 1 |
| regulation of canonical NF-kappaB signal transduction | 1 |
| positive regulation of intracellular signal transduction | 1 |
| ear development | 1 |
| anatomical structure development | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| cell surface receptor signaling pathway | 1 |
| protein tyrosine kinase activity | 1 |
| transmembrane receptor protein kinase activity | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| signaling receptor activity | 1 |
| protein binding | 1 |
| molecular transducer activity | 1 |
| transmembrane signaling receptor activity | 1 |
| Wnt signaling pathway | 1 |
| Wnt-protein binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| kinase activity | 1 |
| phosphotransferase activity, alcohol group as acceptor | 1 |
| catalytic activity, acting on a protein | 1 |
| binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| catalytic activity | 1 |
| actomyosin | 1 |
| contractile actin filament bundle | 1 |
| intracellular anatomical structure | 1 |
| membrane | 1 |
| cell periphery | 1 |
| neuron projection | 1 |
| protein-containing complex | 1 |
| neuron projection terminus | 1 |
Protein interactions and networks
STRING
1118 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ROR1 | WNT5A | P41221 | 988 |
| ROR1 | TCL1A | P56279 | 697 |
| ROR1 | PACSIN2 | Q9UNF0 | 632 |
| ROR1 | WNT3A | P56704 | 584 |
| ROR1 | CAP1 | Q01518 | 568 |
| ROR1 | RORA | P35397 | 552 |
| ROR1 | CAVIN1 | Q6NZI2 | 552 |
| ROR1 | CEP70 | Q8NHQ1 | 547 |
| ROR1 | EGFR | P00533 | 541 |
| ROR1 | WNT3 | P56703 | 537 |
| ROR1 | TCL1B | O95988 | 530 |
| ROR1 | RETNLB | Q9BQ08 | 490 |
| ROR1 | CD8A | P01732 | 481 |
| ROR1 | DCN | P07585 | 478 |
| ROR1 | RETN | Q9HD89 | 463 |
IntAct
63 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| EGFR | ERBB3 | psi-mi:“MI:0914”(association) | 0.920 |
| PIK3R1 | ERBB3 | psi-mi:“MI:0914”(association) | 0.920 |
| ROR1 | SRC | psi-mi:“MI:0915”(physical association) | 0.680 |
| ROR1 | SRC | psi-mi:“MI:0407”(direct interaction) | 0.680 |
| SRC | ROR1 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.680 |
| FZD7 | LRP6 | psi-mi:“MI:2364”(proximity) | 0.620 |
| FZD7 | LRP6 | psi-mi:“MI:0914”(association) | 0.620 |
| EGFR | ROR1 | psi-mi:“MI:0915”(physical association) | 0.580 |
| ROR1 | EGFR | psi-mi:“MI:0914”(association) | 0.580 |
| ROR1 | EGFR | psi-mi:“MI:0915”(physical association) | 0.580 |
| ROR1 | Src | psi-mi:“MI:0915”(physical association) | 0.540 |
| ROR1 | Src | psi-mi:“MI:0217”(phosphorylation reaction) | 0.540 |
| SERPINB13 | TTC4 | psi-mi:“MI:0914”(association) | 0.530 |
| NRAS | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.480 |
| ROR1 | MFHAS1 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| ROR1 | PLEC | psi-mi:“MI:0915”(physical association) | 0.400 |
| Src | ROR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| PPM1B | ROR1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| PPM1F | ROR1 | psi-mi:“MI:0915”(physical association) | 0.370 |
BioGRID (152): ROR1 (Proximity Label-MS), TOP1 (Negative Genetic), SMARCB1 (Negative Genetic), ROR1 (Negative Genetic), VHL (Negative Genetic), ROR1 (Affinity Capture-MS), PPM1B (Two-hybrid), PPM1F (Two-hybrid), ILKAP (Two-hybrid), PTPRR (Two-hybrid), PTPN6 (Two-hybrid), DUSP14 (Two-hybrid), DUSP18 (Two-hybrid), DUSP19 (Two-hybrid), DUSP21 (Two-hybrid)
ESM2 similar proteins: A4IGL7, D3ZB51, E9PZ19, O75882, O94779, O95970, P00533, P02469, P07942, P13590, P15209, P24503, P24786, P33150, P39038, P55245, P55283, P68500, P97300, P97527, P97546, Q01279, Q01973, Q03351, Q16288, Q16620, Q1EGL2, Q3B7N0, Q3UQ28, Q5IFJ9, Q5IS37, Q5IS82, Q5R945, Q63604, Q6IS24, Q6VNS1, Q7TPD3, Q7TT15, Q8K4Y5, Q8N475
Diamond homologs: A0A7J6K144, O18783, P00734, P06868, P08519, P12545, P14210, P14417, P17945, P20918, P26927, P26928, P80010, Q01177, Q01973, Q08048, Q16609, Q24K22, Q29485, Q2TV78, Q5R537, Q5R8X6, Q76BS1, Q7M323, Q867B7, Q9BH09, Q9V6K3, Q9Z139, A0M8R7, A0M8S8, A1X150, B3MH43, B3NS99, B4GBH0, B4HNW4, B4KPU0, B4MR28, B4P5Q9, B4QC63, O15146
SIGNOR signaling
6 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| WNT5A | up-regulates | ROR1 | binding |
| ROR1 | up-regulates | SRC | phosphorylation |
| hsa-miR-382-5p | “down-regulates quantity by repression” | ROR1 | “post transcriptional regulation” |
| ROR1 | “up-regulates activity” | ERBB3 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 52 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Signaling by ERBB2 KD Mutants | 5 | 64.1× | 4e-06 |
| RAF/MAP kinase cascade | 6 | 11.1× | 3e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| positive regulation of MAPK cascade | 6 | 10.1× | 6e-03 |
| positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction | 6 | 9.8× | 6e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
290 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 181 |
| Likely benign | 52 |
| Benign | 24 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 59971 | GRCh38/hg38 1p32.1-31.1(chr1:59632500-76730877)x1 | Pathogenic |
SpliceAI
4569 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:64049935:C:T | donor_gain | 1.0000 |
| 1:64049939:G:GT | donor_gain | 1.0000 |
| 1:64049974:GTTTG:G | donor_gain | 1.0000 |
| 1:64049975:T:G | donor_gain | 1.0000 |
| 1:64049979:G:GG | donor_gain | 1.0000 |
| 1:64049979:GTA:G | donor_loss | 1.0000 |
| 1:64050676:A:AG | acceptor_gain | 1.0000 |
| 1:64050677:T:G | acceptor_gain | 1.0000 |
| 1:64050717:G:GG | donor_gain | 1.0000 |
| 1:64102282:GCGAT:G | donor_gain | 1.0000 |
| 1:64137367:A:AG | acceptor_gain | 1.0000 |
| 1:64137368:G:GC | acceptor_gain | 1.0000 |
| 1:64137368:GA:G | acceptor_gain | 1.0000 |
| 1:64137368:GAGA:G | acceptor_gain | 1.0000 |
| 1:64137368:GAGAT:G | acceptor_gain | 1.0000 |
| 1:64137497:G:GA | donor_loss | 1.0000 |
| 1:64137497:G:GG | donor_gain | 1.0000 |
| 1:64140107:A:AG | acceptor_gain | 1.0000 |
| 1:64140108:G:GG | acceptor_gain | 1.0000 |
| 1:64140108:GCT:G | acceptor_gain | 1.0000 |
| 1:64140422:TAAAA:T | donor_gain | 1.0000 |
| 1:64140424:AAA:A | donor_gain | 1.0000 |
| 1:64140425:AA:A | donor_gain | 1.0000 |
| 1:64140427:G:GG | donor_gain | 1.0000 |
| 1:64142584:G:GT | donor_gain | 1.0000 |
| 1:64158967:A:AG | acceptor_gain | 1.0000 |
| 1:64158968:T:G | acceptor_gain | 1.0000 |
| 1:64158972:T:TA | acceptor_gain | 1.0000 |
| 1:64158975:A:AG | acceptor_gain | 1.0000 |
| 1:64158976:C:G | acceptor_gain | 1.0000 |
AlphaMissense
6167 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:64049757:T:C | L77P | 1.000 |
| 1:64049762:T:A | C79S | 1.000 |
| 1:64049762:T:C | C79R | 1.000 |
| 1:64049763:G:A | C79Y | 1.000 |
| 1:64049763:G:C | C79S | 1.000 |
| 1:64049764:C:G | C79W | 1.000 |
| 1:64049798:T:A | W91R | 1.000 |
| 1:64049798:T:C | W91R | 1.000 |
| 1:64049799:G:C | W91S | 1.000 |
| 1:64049800:G:C | W91C | 1.000 |
| 1:64049800:G:T | W91C | 1.000 |
| 1:64049806:A:C | K93N | 1.000 |
| 1:64049806:A:T | K93N | 1.000 |
| 1:64049874:T:C | L116P | 1.000 |
| 1:64049889:T:A | L121H | 1.000 |
| 1:64049913:T:C | F129S | 1.000 |
| 1:64049918:T:A | C131S | 1.000 |
| 1:64049918:T:C | C131R | 1.000 |
| 1:64049919:G:A | C131Y | 1.000 |
| 1:64049919:G:C | C131S | 1.000 |
| 1:64049920:C:G | C131W | 1.000 |
| 1:64049958:G:A | G144E | 1.000 |
| 1:64049970:T:A | V148D | 1.000 |
| 1:64137394:T:A | C170S | 1.000 |
| 1:64137394:T:C | C170R | 1.000 |
| 1:64137395:G:A | C170Y | 1.000 |
| 1:64137395:G:C | C170S | 1.000 |
| 1:64137403:T:G | Y173D | 1.000 |
| 1:64137409:G:A | G175R | 1.000 |
| 1:64137409:G:C | G175R | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000004094 (1:64102762 A>G), RS1000004326 (1:64037954 C>G), RS1000007441 (1:64059741 CAGTT>C), RS1000014016 (1:63831341 A>G), RS1000027695 (1:63789696 T>G), RS1000028284 (1:63970969 C>G), RS1000029593 (1:64131219 G>T), RS1000051365 (1:64066340 T>C), RS1000059961 (1:63881036 A>G), RS1000069322 (1:64021841 T>C), RS1000073192 (1:64146909 A>G), RS1000074826 (1:64104250 G>A,T), RS1000111994 (1:63988507 C>A), RS1000118588 (1:63838157 A>G), RS1000128528 (1:64081599 A>C)
Disease associations
OMIM: gene MIM:602336 | disease phenotypes: MIM:617654
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| hearing loss, autosomal recessive 108 | Moderate | Autosomal recessive |
| hearing loss, autosomal recessive | Supportive | Autosomal recessive |
| nonsyndromic genetic hearing loss | Limited | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| nonsyndromic genetic hearing loss | Limited | AR |
Mondo (3): hearing loss, autosomal recessive 108 (MONDO:0033200), nonsyndromic genetic hearing loss (MONDO:0019497), hearing loss, autosomal recessive (MONDO:0019588)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C564609 | Deafness, Autosomal Recessive (supp.) | |
| C580334 | Nonsyndromic Deafness (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (3): CHEMBL4665585 (SINGLE PROTEIN), CHEMBL6195509 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195558 (PROTEIN-PROTEIN INTERACTION)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: catalytic receptor — Type VIII RTKs: ROR family
ChEMBL bioactivities
77 potent at pChembl≥5 of 78 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
39 with measured affinity, of 86 total; 36 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-N-(2-amino-2-oxoethyl)-9-benzyl-21-(hydroxymethyl)-12,24,33-tris[(4-hydroxyphenyl)methyl]-15,36-bis(1H-indol-3-ylmethyl)-10-methyl-6,30-bis(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-27-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0022 | uM |
| (3R,9S,12S,15S,21S,24S,30S,33S)-N-(2-amino-2-oxoethyl)-33-benzyl-9,12,15-tris(3-carbamimidamidopropyl)-24-(hydroxymethyl)-30-[(4-hydroxyphenyl)methyl]-28-methyl-5,8,11,14,17,20,23,26,29,32,35-undecaoxo-21-[(4-phenylphenyl)methyl]-1-thia-4,7,10,13,16,19,22,25,28,31,34-undecazacyclohexatriacontane-3-carboxamide | 2005019: Binding affinity to full length human His-tagged ROR1 (937 residues ) assessed as dissociation constant by SPR analysis | kd | 0.0030 | uM |
| (3S,6S,12R,15S,18S,21S,24S,30S,33S,36S,39S)-N-(2-amino-2-oxoethyl)-6,18-dibenzyl-30-(hydroxymethyl)-3,21,33-tris[(4-hydroxyphenyl)methyl]-24-(1H-indol-3-ylmethyl)-19-methyl-15-(2-methylpropyl)-2,5,8,14,17,20,23,26,29,32,35,38-dodecaoxo-36-propan-2-yl-10-thia-1,4,7,13,16,19,22,25,28,31,34,37-dodecazabicyclo[37.3.0]dotetracontane-12-carboxamide | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0052 | uM |
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-N,21-bis(2-amino-2-oxoethyl)-9,36-dibenzyl-12-(4-hydroxyphenyl)-24,33-bis[(4-hydroxyphenyl)methyl]-15-(1H-indol-3-ylmethyl)-10-methyl-30-(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-6,27-di(propan-2-yl)-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0053 | uM |
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-N-(2-amino-2-oxoethyl)-9,36-dibenzyl-30-(3-carbamimidamidopropyl)-21-(hydroxymethyl)-12,24,33-tris[(4-hydroxyphenyl)methyl]-15-(1H-indol-3-ylmethyl)-10-methyl-6-(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-27-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0063 | uM |
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-9,36-dibenzyl-21-(hydroxymethyl)-12,24,33-tris[(4-hydroxyphenyl)methyl]-15-(1H-indol-3-ylmethyl)-10-methyl-6,30-bis(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-27-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0072 | uM |
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-N-(2-amino-2-oxoethyl)-21-(3-amino-3-oxopropyl)-9,36-dibenzyl-12,24,33-tris[(4-hydroxyphenyl)methyl]-15-(1H-indol-3-ylmethyl)-10-methyl-6,30-bis(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-27-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0072 | uM |
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-N-(2-amino-2-oxoethyl)-9,36-dibenzyl-12,21,24,33-tetrakis[(4-hydroxyphenyl)methyl]-15-(1H-indol-3-ylmethyl)-10-methyl-6,30-bis(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-27-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0086 | uM |
| 3-[(5S,8S,11S,14S,17S,20S,26S,29S,32S,35S,38R)-38-[(2-amino-2-oxoethyl)carbamoyl]-5,32-dibenzyl-8,17,29-tris[(4-hydroxyphenyl)methyl]-26-(1H-indol-3-ylmethyl)-31-methyl-11,35-bis(2-methylpropyl)-3,6,9,12,15,18,21,24,27,30,33,36-dodecaoxo-14-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacont-20-yl]propanoic acid | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0099 | uM |
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-30-(4-aminobutyl)-N-(2-amino-2-oxoethyl)-9,36-dibenzyl-21-(hydroxymethyl)-12,24,33-tris[(4-hydroxyphenyl)methyl]-15-(1H-indol-3-ylmethyl)-10-methyl-6-(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-27-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0100 | uM |
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-N-(2-amino-2-oxoethyl)-9,36-dibenzyl-21-(hydroxymethyl)-12,24,33-tris[(4-hydroxyphenyl)methyl]-15-(1H-indol-3-ylmethyl)-10-methyl-6,30-bis(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-27-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005019: Binding affinity to full length human His-tagged ROR1 (937 residues ) assessed as dissociation constant by SPR analysis | kd | 0.0110 | uM |
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-N-(2-amino-2-oxoethyl)-9,36-dibenzyl-21-(hydroxymethyl)-12,24,33-tris[(4-hydroxyphenyl)methyl]-15-(1H-indol-3-ylmethyl)-10,27-dimethyl-6,30-bis(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0123 | uM |
| 2-[(5S,8S,11S,14S,17S,20S,26S,29S,32S,35S,38R)-38-[(2-amino-2-oxoethyl)carbamoyl]-5,32-dibenzyl-8,17,29-tris[(4-hydroxyphenyl)methyl]-26-(1H-indol-3-ylmethyl)-31-methyl-11,35-bis(2-methylpropyl)-3,6,9,12,15,18,21,24,27,30,33,36-dodecaoxo-14-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacont-20-yl]acetic acid | 2005027: Binding affinity to human ROR1 expressed in HEK293 cells by cell based assay | ic50 | 0.0144 | uM |
| (3R,6S,9S,12S,15S,18S,24S,27S)-15-(2-amino-2-hydroxyethyl)-18,27-dibenzyl-9,24-bis[(4-hydroxyphenyl)methyl]-6-(1H-indol-3-ylmethyl)-16-methyl-12-(2-methylpropyl)-5,8,11,14,17,20,23,26,29-nonaoxo-1-thia-4,7,10,13,16,19,22,25,28-nonazacyclotriacontane-3-carboxamide | 2005019: Binding affinity to full length human His-tagged ROR1 (937 residues ) assessed as dissociation constant by SPR analysis | kd | 0.0220 | uM |
| (3R,6S,9S,12S,15S,21S,24S,27S,30S,33S,36S)-N-[2-[[2-[[2-[[(2R)-1-amino-6-[(3’,6’-dihydroxy-3-oxospiro[2-benzofuran-1,9’-xanthene]-5-carbonyl)amino]-1-oxohexan-2-yl]amino]-2-oxoethyl]amino]-2-oxoethyl]amino]-2-oxoethyl]-9,36-dibenzyl-21-(hydroxymethyl)-12,24,33-tris[(4-hydroxyphenyl)methyl]-15-(1H-indol-3-ylmethyl)-10-methyl-6,30-bis(2-methylpropyl)-5,8,11,14,17,20,23,26,29,32,35,38-dodecaoxo-27-propan-2-yl-1-thia-4,7,10,13,16,19,22,25,28,31,34,37-dodecazacyclononatriacontane-3-carboxamide | 2005019: Binding affinity to full length human His-tagged ROR1 (937 residues ) assessed as dissociation constant by SPR analysis | kd | 0.0340 | uM |
| N-[3-[4-(methoxymethoxy)phenyl]-1-methylindol-6-yl]-4-methyl-3-[2-(1H-pyrazolo[3,4-b]pyridin-4-yl)ethynyl]benzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.1000 | uM |
| 3-[2-(6-acetamido-3-pyridinyl)ethynyl]-N-[3-[4-(methoxymethoxy)phenyl]-1-methylindol-6-yl]-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.1100 | uM |
| 3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-[1-methyl-3-[4-[(2-methylpropan-2-yl)oxy]phenyl]indol-6-yl]benzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.1400 | uM |
| N-[3-[4-(methoxymethoxy)phenyl]-1-methylindol-6-yl]-4-methyl-3-[2-(1H-pyrazolo[5,4-b]pyridin-5-yl)ethynyl]benzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.1600 | uM |
| N-[3-(6-fluoro-3-pyridinyl)-1-methylindol-6-yl]-3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.1800 | uM |
| 3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-N-[3-[4-(methoxymethoxy)phenyl]-1-methylindol-6-yl]-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.2600 | uM |
| 3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-[1-methyl-3-[4-(4-methylpiperazin-1-yl)phenyl]indol-6-yl]benzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.3300 | uM |
| (2R)-5,7-bis(methoxymethoxy)-2-(4-methoxyphenyl)-2,3-dihydrochromen-4-one | 2066205: Binding affinity to N-terminal His-tagged ROR1 frizzled domain (61 to 393 residues) (unknown origin) transfected in baculovirus infected High Five cells assessed as dissociation constant by SPR analysis | kd | 0.4700 | uM |
| 3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-N-[3-[4-(2-methoxyethoxy)phenyl]-1-methylindol-6-yl]-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.5700 | uM |
| N-[3-(3-cyanophenyl)-1-methylindol-6-yl]-3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.5800 | uM |
| 3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-(1-methylindol-6-yl)benzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.6200 | uM |
| N-[3-(2,3-dihydro-1,4-benzodioxin-6-yl)-1-methylindol-6-yl]-3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.7000 | uM |
| N-[3-(4-cyanophenyl)-1-methylindol-6-yl]-3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.7800 | uM |
| N-[3-(3,4-dimethoxyphenyl)-1-methylindol-6-yl]-3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.8500 | uM |
| N-(2,3-dihydro-1,4-benzodioxin-6-yl)-3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.8800 | uM |
| N-[3-(2-fluoro-3-pyridinyl)-1-methylindol-6-yl]-3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.9500 | uM |
| N-[3-(6-fluoro-3-pyridinyl)-1-methylindol-6-yl]-4-methyl-3-[2-(1H-pyrazolo[3,4-b]pyridin-4-yl)ethynyl]benzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 1.6500 | uM |
| N-[1-ethyl-3-(6-fluoro-3-pyridinyl)indol-6-yl]-3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 1.8100 | uM |
| 3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-[1-methyl-3-(4-morpholin-4-ylphenyl)indol-6-yl]benzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 2.4800 | uM |
| N-[3-(6-fluoro-3-pyridinyl)-1-methylindol-6-yl]-4-methyl-3-[2-(1H-pyrrolo[2,3-b]pyridin-5-yl)ethynyl]benzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 4.7500 | uM |
| N-[3-(dimethylamino)phenyl]-3-(2-imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methylbenzamide | 2066076: Binding affinity to ROR1 kinase domain (453 to 783 residues) (unknown origin) assessed as dissociation constant by SPR analysis | kd | 8.2500 | uM |
CTD chemical–gene interactions
65 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression, decreases expression, decreases methylation | 6 |
| Benzo(a)pyrene | decreases expression, increases methylation | 4 |
| trichostatin A | increases expression, affects cotreatment | 3 |
| Dexamethasone | affects cotreatment, increases expression | 3 |
| Formaldehyde | decreases expression | 3 |
| Particulate Matter | increases abundance, increases expression, decreases expression | 3 |
| sodium arsenite | decreases expression, increases abundance, increases expression | 2 |
| entinostat | affects cotreatment, increases expression | 2 |
| Panobinostat | affects cotreatment, increases expression | 2 |
| Air Pollutants | decreases expression, increases abundance, increases expression | 2 |
| Arsenic | increases abundance, increases expression, affects methylation | 2 |
| Estradiol | affects expression, affects cotreatment, increases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Tetrachlorodibenzodioxin | increases expression | 2 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, increases expression | 2 |
| 8-Bromo Cyclic Adenosine Monophosphate | decreases expression, affects cotreatment, increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| bisphenol F | affects cotreatment, increases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| bisphenol A | increases expression, affects cotreatment | 1 |
| terbufos | increases methylation | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | affects expression, decreases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| versicolorin A | decreases expression | 1 |
| nickel sulfate | decreases expression | 1 |
| cupric oxide | decreases expression | 1 |
| hydroquinone | decreases expression | 1 |
| N,N,N’,N’-tetrakis(2-pyridylmethyl)ethylenediamine | increases expression | 1 |
| cylindrospermopsin | decreases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
ChEMBL screening assays
40 unique, capped per target: 40 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5358430 | Binding | Binding affinity to full length human His-tagged ROR1 (937 residues ) assessed as dissociation constant by SPR analysis | Exploration of macrocyclic peptide binders to the extracellular CRD domain of human receptor tyrosine kinase-like orphan receptor 1 (ROR1). — Bioorg Med Chem Lett |
Cellosaurus cell lines
10 cell lines: 7 cancer cell line, 2 transformed cell line, 1 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B9R7 | Abcam A-549 ROR1 KO | Cancer cell line | Male |
| CVCL_D7ZL | Ubigene A-549 ROR1 KO | Cancer cell line | Male |
| CVCL_E0MX | Ubigene HeLa ROR1 KO | Cancer cell line | Female |
| CVCL_E6RL | Genomeditech CHO-K1 H_ROR1 | Spontaneously immortalized cell line | Female |
| CVCL_E6UT | Genomeditech HEK-293 H_ROR1 | Transformed cell line | Female |
| CVCL_E8II | Jurkat-NFAT-Luc2-ROR1-KO-CD16-V158 clone 2A6 | Cancer cell line | Male |
| CVCL_TJ53 | HAP1 ROR1 (-) 1 | Cancer cell line | Male |
| CVCL_TJ54 | HAP1 ROR1 (-) 2 | Cancer cell line | Male |
| CVCL_TJ55 | HAP1 ROR1 (-) 3 | Cancer cell line | Male |
| CVCL_UE49 | 293T human ROR1 | Transformed cell line | Female |
Clinical trials (associated diseases)
1 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT01802190 | Not specified | TERMINATED | Prevalence of POU4F3 and SLC17A8 Mutations |
Related Atlas pages
- Associated diseases: hearing loss, autosomal recessive 108, nonsyndromic genetic hearing loss, hearing loss, autosomal recessive
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): hearing loss, autosomal recessive, hearing loss, autosomal recessive 108, nonsyndromic genetic hearing loss