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RORB

gene
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Also known as RZRBNR1F2ROR-BETARORβRZR-BETA

Summary

RORB (RAR related orphan receptor B, HGNC:10259) is a protein-coding gene on chromosome 9q21.13, encoding Nuclear receptor ROR-beta (Q92753). Nuclear receptor that binds DNA as a monomer to ROR response elements (RORE) containing a single core motif half-site 5’-AGGTCA-3’ preceded by a short A-T-rich sequence. It is haploinsufficient (ClinGen: sufficient evidence).

The protein encoded by this gene is a member of the NR1 subfamily of nuclear hormone receptors. It is a DNA-binding protein that can bind as a monomer or as a homodimer to hormone response elements upstream of several genes to enhance the expression of those genes. The encoded protein has been shown to interact with NM23-2, a nucleoside diphosphate kinase involved in organogenesis and differentiation, and to help regulate the expression of some genes involved in circadian rhythm.

Source: NCBI Gene 6096 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): complex neurodevelopmental disorder (Definitive, ClinGen) — +1 more curated relationship
  • GWAS associations: 13
  • Clinical variants (ClinVar): 478 total — 39 pathogenic, 24 likely-pathogenic (top 7% of genes corpus-wide)
  • Regional missense constraint (gnomAD): 2 of 4 regions constrained (≈42% of expected missense variation)
  • GTEx eGene: eQTL in 13 tissues, sQTL in 0 (q < 0.05)
  • Phenotypes (HPO): 15
  • ChEMBL bioactivity: 2 clinical-phase molecules tested; no curated mechanism-of-action drug
  • Dosage sensitivity (ClinGen): haploinsufficiency sufficient evidence, triplosensitivity no evidence
  • Constraint (gnomAD): pLI 1.00 (loss-of-function intolerant), LOEUF 0.26 (highly constrained)
  • MANE Select transcript: NM_006914

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:10259
Approved symbolRORB
NameRAR related orphan receptor B
Location9q21.13
Locus typegene with protein product
StatusApproved
AliasesRZRB, NR1F2, ROR-BETA, RORβ, RZR-BETA
Ensembl geneENSG00000198963
Ensembl biotypeprotein_coding
OMIM601972
Entrez6096

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 protein_coding

MANE Select: ENST00000376896

Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 2

ENST00000376896, ENST00000396204, ENST00001134894

RefSeq mRNA: 2 — MANE Select: NM_006914 NM_001365023, NM_006914

CCDS: CCDS6646, CCDS94422

Canonical transcript exons

ENST00000376896 — 10 exons

ExonStartEnd
ENSE000007068597464241474642815
ENSE000007068627463463174634772
ENSE000007068667466548874665595
ENSE000007068677466779174667901
ENSE000007068687467178974671901
ENSE000008038077466061774660738
ENSE000008038087466247474662606
ENSE000014720837449733574497983
ENSE000016098207463028274630367
ENSE000037103327468546374693177

Expression profiles

Bgee: expression breadth ubiquitous, 196 present calls, max score 98.32.

FANTOM5 (CAGE): breadth broad, TPM avg 14.2823 / max 1807.3972, expressed in 664 samples.

Highest expression (Bgee): endothelial cell, Brodmann (1909) area 23, middle temporal gyrus, parietal lobe, postcentral gyrus.

Genetic regulation across tissues (GTEx eQTL / sQTL)

RORB is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 13 tissues and its splicing (sQTL) in 0 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.

13 significant tissue × QTL associations:

TissueQTLq-valueSlopeLead variant
Artery Tibialeqtl8.8e-17-0.509:74356294:G:C
Esophagus Musculariseqtl4.4e-10+0.319:73529834:T:C
Cells Cultured fibroblastseqtl8.5e-07+0.209:74007152:C:A
Brain Spinal cord cervical c-1eqtl3.9e-06+1.739:74475738:T:C
Brain Cerebellar Hemisphereeqtl9.5e-04-0.189:74526035:C:T
Brain Caudate basal gangliaeqtl3.9e-03-0.689:74623946:A:G
Adipose Visceral Omentumeqtl4.1e-03-0.209:74579612:A:G
Esophagus Gastroesophageal Junctioneqtl1.3e-02+0.229:73498667:C:T
Brain Cerebellumeqtl1.6e-02-0.199:74727899:C:G
Brain Frontal Cortex BA9eqtl1.8e-02+0.249:75493785:T:C
Pancreaseqtl2.0e-02-0.279:74722358:T:A
Colon Transverseeqtl3.4e-02-0.149:75208214:G:A
Heart Left Ventricleeqtl3.9e-02+0.419:73579847:C:T

FANTOM5 promoters

10 alternative TSS:

Promoter IDTPM avgSamples expressed
9696511.8733565
969641.2961402
2055160.4314109
2055170.328589
2055140.134464
2055150.105848
2055180.069929
969670.02906
969660.00894
969680.00492

Top tissues by expression

showing 100 of 283 tissues by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
endothelial cellCL:000011598.32gold quality
Brodmann (1909) area 23UBERON:001355497.59gold quality
middle temporal gyrusUBERON:000277195.87gold quality
parietal lobeUBERON:000187295.02gold quality
postcentral gyrusUBERON:000258194.97gold quality
pigmented layer of retinaUBERON:000178294.96gold quality
primary visual cortexUBERON:000243693.84gold quality
occipital lobeUBERON:000202193.25gold quality
superior frontal gyrusUBERON:000266192.94gold quality
entorhinal cortexUBERON:000272891.58gold quality
endometriumUBERON:000129589.44gold quality
cortical plateUBERON:000534389.42gold quality
seminal vesicleUBERON:000099887.97gold quality
deciduaUBERON:000245085.56silver quality
epithelium of nasopharynxUBERON:000195185.12gold quality
mucosa of paranasal sinusUBERON:000503083.38gold quality
dorsolateral prefrontal cortexUBERON:000983482.92gold quality
frontal cortexUBERON:000187080.38gold quality
neocortexUBERON:000195079.96gold quality
temporal lobeUBERON:000187179.93gold quality
Brodmann (1909) area 9UBERON:001354079.92gold quality
buccal mucosa cellCL:000233679.90gold quality
cerebral cortexUBERON:000095679.46gold quality
prefrontal cortexUBERON:000045179.32gold quality
ventral tegmental areaUBERON:000269178.58gold quality
telencephalonUBERON:000189377.22gold quality
right frontal lobeUBERON:000281077.20gold quality
ventricular zoneUBERON:000305377.12gold quality
lower lobe of lungUBERON:000894976.74silver quality
lateral nuclear group of thalamusUBERON:000273675.73gold quality
forebrainUBERON:000189075.26gold quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047375.11gold quality
cingulate cortexUBERON:000302774.89gold quality
cauda epididymisUBERON:000436074.73gold quality
anterior cingulate cortexUBERON:000983574.65gold quality
superior vestibular nucleusUBERON:000722773.05gold quality
ganglionic eminenceUBERON:000402372.78gold quality
dorsal plus ventral thalamusUBERON:000189772.58gold quality
caudate nucleusUBERON:000187372.08gold quality
amygdalaUBERON:000187672.00gold quality
brainUBERON:000095571.92gold quality
ponsUBERON:000098871.78silver quality
central nervous systemUBERON:000101771.39gold quality
subthalamic nucleusUBERON:000190671.18gold quality
putamenUBERON:000187471.02gold quality
popliteal arteryUBERON:000225070.89gold quality
tibial arteryUBERON:000761070.89gold quality
uterusUBERON:000099570.56gold quality
mammalian vulvaUBERON:000099770.46gold quality
corpus callosumUBERON:000233670.07gold quality
globus pallidusUBERON:000187569.95gold quality
germinal epithelium of ovaryUBERON:000130469.44silver quality
nucleus accumbensUBERON:000188269.27gold quality
Ammon’s hornUBERON:000195469.27gold quality
medial globus pallidusUBERON:000247769.18gold quality
lateral globus pallidusUBERON:000247668.86gold quality
gingivaUBERON:000182868.65silver quality
substantia nigra pars compactaUBERON:000196568.61gold quality
gingival epitheliumUBERON:000194968.09gold quality
islet of LangerhansUBERON:000000667.90gold quality
dorsal root ganglionUBERON:000004467.89gold quality
prostate glandUBERON:000236767.64gold quality
placentaUBERON:000198767.45gold quality
cerebellar vermisUBERON:000472067.42silver quality
stromal cell of endometriumCL:000225567.19gold quality
substantia nigra pars reticulataUBERON:000196667.03gold quality
cardia of stomachUBERON:000116266.96silver quality
medulla oblongataUBERON:000189666.80gold quality
hypothalamusUBERON:000189866.24gold quality
gall bladderUBERON:000211066.17gold quality
inferior vagus X ganglionUBERON:000536366.07silver quality
midbrainUBERON:000189165.99gold quality
pericardiumUBERON:000240765.90silver quality
saphenous veinUBERON:000731865.89gold quality
right adrenal gland cortexUBERON:003582765.53gold quality
trigeminal ganglionUBERON:000167565.42silver quality
superior surface of tongueUBERON:000737165.40gold quality
substantia nigraUBERON:000203865.05gold quality
right adrenal glandUBERON:000123364.98gold quality
parietal pleuraUBERON:000240064.72gold quality
pharyngeal mucosaUBERON:000035564.71silver quality
left adrenal glandUBERON:000123464.64gold quality
adrenal cortexUBERON:000123564.57gold quality
vena cavaUBERON:000408764.51gold quality
adenohypophysisUBERON:000219663.98gold quality
adrenal glandUBERON:000236963.89gold quality
left adrenal gland cortexUBERON:003582563.73gold quality
tongueUBERON:000172363.72gold quality
embryoUBERON:000092263.18gold quality
endocervixUBERON:000045863.00gold quality
pleuraUBERON:000097762.92silver quality
body of tongueUBERON:001187662.72gold quality
renal medullaUBERON:000036262.61gold quality
penisUBERON:000098962.48gold quality
tracheaUBERON:000312662.31gold quality
nippleUBERON:000203062.29gold quality
urinary bladderUBERON:000125561.64gold quality
pituitary glandUBERON:000000761.38gold quality
female reproductive systemUBERON:000047461.28gold quality
cardiac ventricleUBERON:000208261.27gold quality

Single-cell (SCXA)

Detected in 6 experiment(s), a significant marker in 6.

ExperimentMarker?Max mean expression
E-HCAD-35yes900.97
E-HCAD-25yes692.05
E-HCAD-5yes459.00
E-MTAB-10287yes121.20
E-GEOD-137537yes8.10
E-ANND-3no0.00

HPA expression

RNA tissue specificity: Tissue enriched

showing 60 of 78 HPA tissues / cells by nTPM:

Tissue / cellAxisnTPMProtein (IHC)
Cerebral cortextissue60.9high
Occipital cortextissue60.9
Somatosensory cortextissue57.1
Postcentral gyrustissue55.6
Retinatissue51.5
Thalamustissue45.3
Spinal cordtissue44.6
Prefrontal cortextissue44.0
Hippocampal formationtissue43.3
Entorhinal cortextissue43.3
Retrosplenial and cingulate cortextissue41.3
Hypothalamustissue39.3
Motor cortextissue38.1
Midbraintissue38.0
Medulla oblongatatissue37.8
Temporal cortextissue37.0
Ponstissue35.3
Superior colliculitissue33.4
Insular cortextissue32.6
Periaqueductal graytissue31.9
Retrosplenial cortextissue30.8
Putamentissue27.9
Amygdalatissue27.0
Basal gangliatissue26.4high
Substantia nigratissue26.4
Septumtissue26.1
Ventral forebraintissue23.7
Olfactory bulbtissue14.0
Nucleus accumbenstissue13.8
Corpus callosumtissue11.5
Frontal cortextissue10.2
Hippocampustissue9.7medium
Cerebellumtissue9.4medium
Cervixtissue9.2low
Locus coeruleustissue6.8
Seminal vesicletissue4.7medium
Prostatetissue4.3not detected
Caudate putamentissue4.2
Endometrium 1tissue3.7medium
Adrenal glandtissue3.2medium
Choroid plexustissue1.9
Placentatissue1.9low
Gallbladdertissue1.6medium
Pituitary glandtissue1.5
Heart muscletissue1.5medium
Adipose tissuetissue1.1low
Vaginatissue0.7low
Urinary bladdertissue0.6medium
Testistissue0.5medium
Lungtissue0.5medium
Kidneytissue0.5medium
Esophagustissue0.4medium
Thymustissue0.4
Stomach 1tissue0.3medium
Rectumtissue0.3medium
Parathyroid glandtissue0.3medium
Smooth muscletissue0.3medium
Tonsiltissue0.3low
Skin 1tissue0.2low
Colontissue0.2medium

Brain sub-regions (HPA Brain Atlas): detected in 191; highest nTPM — Transversal temporal gyrus, anterior (53.8), Transversal temporal gyrus, posterior (52.7), Area striata (52.4), Postcentral gyrus, middle (49.2), Temporo-occipital transitional zone (46.7).

Regulation

Is transcription factor: yes

Downstream targets (CollecTRI)

7 targets:

TargetRegulation
BMAL1Unknown
KCNQ5
NAMPT
NRL
OPN1MWActivation
OPN1SWActivation
RORB

JASPAR motifs

MotifNameFamily
MA1150.1RORBThyroid hormone receptor-related factors (NR1)
MA1150.2RORBThyroid hormone receptor-related factors (NR1)

JASPAR matrix evidence (PMIDs): PMID:25500868

Upstream regulators (CollecTRI, top): RORB

Functional genomics

gnomAD constraint: pLI 1, LOEUF 0.257, missense Z 3.67 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD

Regional missense constraint (gnomAD)

ENST00000376896 splits into 4 regions with different missense tolerance; 2 are missense-constrained (≈42% of the expected missense variation). Missense variants in a constrained region (low observed/expected) are more likely to be pathogenic. gnomAD

Region (GRCh38)Missense obs / expo/eConstrained
9:74,497,977–74,642,46837 / 116.40.32yes (p 1.9e-13)
9:74,642,469–74,660,626134 / 156.20.86no
9:74,660,627–74,665,53240 / 116.90.34yes (p 1.1e-12)
9:74,665,533–74,685,615109 / 171.00.64no
ClinGen dosage: haploinsufficiency 3 (sufficient evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map

Literature-anchored findings (GeneRIF, showing 10)

  • In the suprachiasmatic nucleus, ROR beta mRNA signals showed a peak at early daytime and a trough at early nighttime. ROR beta is a transcription factor possibly related to the circadian pacemaking system. (PMID:11849752)
  • these data demonstrate that Rorbeta regulates known osteogenic pathways, and may represent a novel therapeutic target for age-associated bone loss. (PMID:24125721)
  • associations between NR1D1, RORA and RORB genes and bipolar disorder.( (PMID:25789810)
  • Retinoic acid-related orphan receptor RORbeta, circadian rhythm abnormalities and tumorigenesis (PMID:25816151)
  • Nonsense variant in RORB was identified in four family members with epilepsy. Two de novo RORB deletions identified in patients with behavioral and cognitive impairment and epilepsy. (PMID:27352968)
  • Results show that NRIP2 regulates the activity of the Wnt pathway via RORbeta. RORbeta inhibits tumorigenesis and the self-renewal of cancer initiating cells (CCICs) and targets HBP1 in regulating Wnt pathway to inhibit tumorigenesis and the self-renewal of CCICs. (PMID:28137278)
  • Inherited RORB pathogenic variants: Overlap of photosensitive genetic generalized and occipital lobe epilepsy. (PMID:32162308)
  • RORbeta suppresses the stemness of gastric cancer cells by downregulating the activity of the Wnt signaling pathway. (PMID:34278502)
  • Comprehensive analysis of the prognosis and biological significance of RORbeta in head and neck squamous cell carcinoma. (PMID:37278231)
  • RORB, an Alzheimer’s disease susceptibility gene, is associated with viral encephalitis, an Alzheimer’s disease risk factor. (PMID:37734269)

Cross-species orthologs

188 orthologs

OrganismSymbolGene ID
danio_reriororbENSDARG00000033498
mus_musculusRorbENSMUSG00000036192
rattus_norvegicusRorbENSRNOG00000013413
drosophila_melanogasterEcRFBGN0000546
drosophila_melanogasterHr96FBGN0015240
caenorhabditis_elegansWBGENE00001062
caenorhabditis_elegansnhr-2WBGENE00003601
caenorhabditis_elegansWBGENE00003608
caenorhabditis_elegansWBGENE00003611
caenorhabditis_elegansWBGENE00003614
caenorhabditis_elegansWBGENE00003615
caenorhabditis_elegansWBGENE00003617
caenorhabditis_elegansWBGENE00003618
caenorhabditis_elegansWBGENE00003620
caenorhabditis_elegansnhr-23WBGENE00003622
caenorhabditis_elegansWBGENE00003624
caenorhabditis_elegansWBGENE00003632
caenorhabditis_elegansWBGENE00003634
caenorhabditis_elegansWBGENE00003638
caenorhabditis_elegansWBGENE00003640
caenorhabditis_elegansWBGENE00003641
caenorhabditis_elegansWBGENE00003642
caenorhabditis_elegansWBGENE00003643
caenorhabditis_elegansWBGENE00003644
caenorhabditis_elegansWBGENE00003645
caenorhabditis_elegansWBGENE00003646
caenorhabditis_elegansWBGENE00003648
caenorhabditis_elegansWBGENE00003649
caenorhabditis_elegansWBGENE00003651
caenorhabditis_elegansWBGENE00003653
caenorhabditis_elegansWBGENE00003655
caenorhabditis_elegansWBGENE00003658
caenorhabditis_elegansWBGENE00003660
caenorhabditis_elegansWBGENE00003662
caenorhabditis_elegansnhr-73WBGENE00003663
caenorhabditis_elegansnhr-77WBGENE00003667
caenorhabditis_elegansWBGENE00003669
caenorhabditis_elegansnhr-81WBGENE00003671
caenorhabditis_elegansnhr-82WBGENE00003672
caenorhabditis_elegansWBGENE00003676
caenorhabditis_elegansWBGENE00003677
caenorhabditis_elegansWBGENE00003680
caenorhabditis_elegansWBGENE00003682
caenorhabditis_elegansWBGENE00003684
caenorhabditis_elegansWBGENE00003685
caenorhabditis_elegansWBGENE00003686
caenorhabditis_elegansWBGENE00003688
caenorhabditis_elegansWBGENE00003689
caenorhabditis_elegansWBGENE00003692
caenorhabditis_elegansWBGENE00003693
caenorhabditis_elegansWBGENE00003694
caenorhabditis_elegansWBGENE00003696
caenorhabditis_elegansWBGENE00003698
caenorhabditis_elegansWBGENE00003699
caenorhabditis_elegansWBGENE00003700
caenorhabditis_elegansWBGENE00003702
caenorhabditis_elegansWBGENE00003704
caenorhabditis_elegansWBGENE00003705
caenorhabditis_elegansWBGENE00003707
caenorhabditis_elegansWBGENE00003708
caenorhabditis_elegansWBGENE00003712
caenorhabditis_elegansWBGENE00003713
caenorhabditis_elegansWBGENE00003714
caenorhabditis_elegansWBGENE00003715
caenorhabditis_elegansWBGENE00003716
caenorhabditis_elegansWBGENE00003717
caenorhabditis_elegansWBGENE00003718
caenorhabditis_elegansWBGENE00003720
caenorhabditis_elegansWBGENE00003721
caenorhabditis_elegansWBGENE00003722
caenorhabditis_elegansWBGENE00003723
caenorhabditis_elegansWBGENE00003724
caenorhabditis_elegansWBGENE00003725
caenorhabditis_elegansWBGENE00003728
caenorhabditis_elegansWBGENE00004786
caenorhabditis_elegansWBGENE00006471
caenorhabditis_elegansunc-55WBGENE00006790
caenorhabditis_elegansWBGENE00007367
caenorhabditis_elegansWBGENE00008056
caenorhabditis_elegansnhr-165WBGENE00008158
caenorhabditis_elegansWBGENE00008208
caenorhabditis_elegansnhr-169WBGENE00008289
caenorhabditis_elegansWBGENE00008309
caenorhabditis_elegansnhr-174WBGENE00008474
caenorhabditis_elegansWBGENE00008619
caenorhabditis_elegansWBGENE00008630
caenorhabditis_elegansWBGENE00008778
caenorhabditis_elegansWBGENE00008830
caenorhabditis_elegansWBGENE00008884
caenorhabditis_elegansWBGENE00008901
caenorhabditis_elegansnhr-265WBGENE00009608
caenorhabditis_elegansWBGENE00010017
caenorhabditis_elegansWBGENE00010180
caenorhabditis_elegansWBGENE00010186
caenorhabditis_elegansWBGENE00010215
caenorhabditis_elegansWBGENE00010410
caenorhabditis_elegansWBGENE00010600
caenorhabditis_elegansWBGENE00010601
caenorhabditis_elegansWBGENE00010602
caenorhabditis_elegansWBGENE00010603
caenorhabditis_elegansWBGENE00010604
caenorhabditis_elegansWBGENE00011002
caenorhabditis_elegansWBGENE00011150
caenorhabditis_elegansWBGENE00011396
caenorhabditis_elegansWBGENE00011520
caenorhabditis_elegansWBGENE00011565
caenorhabditis_elegansWBGENE00011566
caenorhabditis_elegansWBGENE00011568
caenorhabditis_elegansnhr-217WBGENE00011651
caenorhabditis_elegansWBGENE00011750
caenorhabditis_elegansWBGENE00012050
caenorhabditis_elegansWBGENE00012056
caenorhabditis_elegansWBGENE00012446
caenorhabditis_elegansWBGENE00012449
caenorhabditis_elegansWBGENE00012596
caenorhabditis_elegansWBGENE00012703
caenorhabditis_elegansWBGENE00013067
caenorhabditis_elegansWBGENE00013483
caenorhabditis_elegansnhr-276WBGENE00013512
caenorhabditis_elegansWBGENE00013584
caenorhabditis_elegansWBGENE00013940
caenorhabditis_elegansWBGENE00014068
caenorhabditis_elegansnhr-245WBGENE00014189
caenorhabditis_elegansWBGENE00014193
caenorhabditis_elegansWBGENE00015497
caenorhabditis_elegansWBGENE00015758
caenorhabditis_elegansWBGENE00015897
caenorhabditis_elegansWBGENE00015900
caenorhabditis_elegansWBGENE00015901
caenorhabditis_elegansWBGENE00015902
caenorhabditis_elegansWBGENE00016091
caenorhabditis_elegansWBGENE00016233
caenorhabditis_elegansWBGENE00016364
caenorhabditis_elegansWBGENE00016365
caenorhabditis_elegansWBGENE00016366
caenorhabditis_elegansWBGENE00016367
caenorhabditis_elegansWBGENE00016368
caenorhabditis_elegansWBGENE00016517
caenorhabditis_elegansWBGENE00016772
caenorhabditis_elegansWBGENE00016926
caenorhabditis_elegansWBGENE00016927
caenorhabditis_elegansWBGENE00017503
caenorhabditis_elegansWBGENE00017512
caenorhabditis_elegansWBGENE00017961
caenorhabditis_elegansWBGENE00018189
caenorhabditis_elegansWBGENE00018265
caenorhabditis_elegansWBGENE00018266
caenorhabditis_elegansWBGENE00018404
caenorhabditis_elegansWBGENE00018412
caenorhabditis_elegansWBGENE00018415
caenorhabditis_elegansWBGENE00018539
caenorhabditis_elegansWBGENE00018541
caenorhabditis_elegansWBGENE00018542
caenorhabditis_elegansWBGENE00018544
caenorhabditis_elegansWBGENE00018545
caenorhabditis_elegansWBGENE00018622
caenorhabditis_elegansWBGENE00019115
caenorhabditis_elegansWBGENE00019116
caenorhabditis_elegansWBGENE00019741
caenorhabditis_elegansWBGENE00019742
caenorhabditis_elegansWBGENE00019743
caenorhabditis_elegansWBGENE00020015
caenorhabditis_elegansWBGENE00020062
caenorhabditis_elegansWBGENE00020152
caenorhabditis_elegansWBGENE00020153
caenorhabditis_elegansWBGENE00020385
caenorhabditis_elegansWBGENE00020460
caenorhabditis_elegansWBGENE00020555
caenorhabditis_elegansWBGENE00020750
caenorhabditis_elegansWBGENE00020849
caenorhabditis_elegansWBGENE00020850
caenorhabditis_elegansWBGENE00020851
caenorhabditis_elegansWBGENE00020852
caenorhabditis_elegansWBGENE00021163
caenorhabditis_elegansWBGENE00021522
caenorhabditis_elegansWBGENE00021610
caenorhabditis_elegansWBGENE00021611
caenorhabditis_elegansWBGENE00021617
caenorhabditis_elegansWBGENE00022097
caenorhabditis_elegansWBGENE00022637
caenorhabditis_elegansWBGENE00022639
caenorhabditis_elegansWBGENE00022640
caenorhabditis_elegansWBGENE00022726
caenorhabditis_elegansWBGENE00022756
caenorhabditis_elegansWBGENE00022805
caenorhabditis_elegansWBGENE00044353
caenorhabditis_elegansWBGENE00044699
caenorhabditis_elegansWBGENE00045515

Paralogs (18): NR1H4 (ENSG00000012504), NR1H3 (ENSG00000025434), RORA (ENSG00000069667), RARB (ENSG00000077092), VDR (ENSG00000111424), PPARD (ENSG00000112033), THRA (ENSG00000126351), NR1D1 (ENSG00000126368), NR1H2 (ENSG00000131408), RARA (ENSG00000131759), PPARG (ENSG00000132170), NR1I3 (ENSG00000143257), RORC (ENSG00000143365), NR1I2 (ENSG00000144852), THRB (ENSG00000151090), RARG (ENSG00000172819), NR1D2 (ENSG00000174738), PPARA (ENSG00000186951)

Mouse-model phenotypes

Observed phenotypes of the mouse ortholog (MGI:1343464) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 43 distinct phenotype terms.

Mouse phenotype (MP)Records
abnormal gait6
limb grasping3
disorganized retina layers2
impaired limb coordination2
abnormal retina inner plexiform layer morphology2
absent amacrine cells2
absent retina horizontal cells2
disorganized retina outer plexiform layer2
abnormal retina cone cell morphology1
decreased body size1
abnormal retina morphology1
retina degeneration1
impaired coordination1
decreased exploration in new environment1
male infertility1
abnormal learning/memory/conditioning1
abnormal motor capabilities/coordination/movement1
abnormal social/conspecific interaction behavior1
abnormal sexual interaction1
abnormal neuron morphology1
increased retina ganglion cell number1
abnormal photoreceptor outer segment morphology1
abnormal photoreceptor inner segment morphology1
abnormal rod electrophysiology1
abnormal cone electrophysiology1

+18 more (showing top 25).

Additional cross-species homologs

Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.

OrganismUniProtIdentityMethod
Ovis ariesB3SV5699.3%Diamond
Bos taurusQ08E0299.3%Diamond
Pongo abeliiQ5RAP499.2%Diamond
Macaca fascicularisQ95K9098.8%Diamond
Oncorhynchus mykissQ9W6I998.6%Diamond
Sus scrofaA0P8Z498.4%Diamond
Notophthalmus viridescensP1851597.4%Diamond
Gallus gallusO4210197.2%Diamond
Xenopus laevisP7003397.0%Diamond
Xenopus tropicalisQ66JK197.0%Diamond
Equus caballusQ9GKL296.5%Diamond
Callorhinus ursinusP6204495.4%Diamond
Pusa sibiricaP6204595.4%Diamond
Drosophila virilisO1684594.9%Diamond
Galleria mellonellaP4986889.6%Diamond
Manduca sextaQ0888289.6%Diamond
Cavia porcellusO3550788.9%Diamond
Oryzias latipesQ9YGL385.1%Diamond
Notamacropus eugeniiQ95L8780.4%Diamond
Strongylocentrotus purpuratusQ2662265.8%Diamond
Metapenaeus ensisO7724565.3%Diamond

Genomic neighbors (locus context)

Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).

SymbolTypeEntrez
RORB-AS1ncRNA103752585
TRPM6protein-coding140803
C9orf40protein-coding55071

Protein

Protein identifiers

Nuclear receptor ROR-beta — Q92753 (reviewed: Q92753)

Alternative names: Nuclear receptor RZR-beta, Nuclear receptor subfamily 1 group F member 2, Retinoid-related orphan receptor-beta

All UniProt accessions (3): A0A1L4FMK7, Q92753, Q58EY0

UniProt curated annotations — full annotation on UniProt →

Function. Nuclear receptor that binds DNA as a monomer to ROR response elements (RORE) containing a single core motif half-site 5’-AGGTCA-3’ preceded by a short A-T-rich sequence. Considered to have intrinsic transcriptional activity, have some natural ligands such as all-trans retinoic acid (ATRA) and other retinoids which act as inverse agonists repressing the transcriptional activity. Required for normal postnatal development of rod and cone photoreceptor cells. Modulates rod photoreceptors differentiation at least by inducing the transcription factor NRL-mediated pathway. In cone photoreceptor cells, regulates transcription of OPN1SW. Involved in the regulation of the period length and stability of the circadian rhythm. May control cytoarchitectural patterning of neocortical neurons during development. May act in a dose-dependent manner to regulate barrel formation upon innervation of layer IV neurons by thalamocortical axons. May play a role in the suppression of osteoblastic differentiation through the inhibition of RUNX2 transcriptional activity. Isoform 1 is critical for hindlimb motor control and for the differentiation of amacrine and horizontal cells in the retina. Regulates the expression of PTF1A synergistically with FOXN4.

Subunit / interactions. Monomer. Interacts with CRX.

Subcellular location. Nucleus. Nucleoplasm.

Disease relevance. Epilepsy, idiopathic generalized 15 (EIG15) [MIM:618357] An autosomal dominant form of idiopathic generalized epilepsy, a disorder characterized by recurring generalized seizures in the absence of detectable brain lesions and/or metabolic abnormalities. Generalized seizures arise diffusely and simultaneously from both hemispheres of the brain. Seizure types include juvenile myoclonic seizures, absence seizures, and generalized tonic-clonic seizures. EIG15 is characterized by onset of variable types of seizures in the first decade of life. Disease susceptibility is associated with variants affecting the gene represented in this entry.

Domain organisation. AF-2 (activation function-2) motif is required for recruiting coregulators containing the LXXLL motif, such as NCOA1, and control the transactivational activity.

Similarity. Belongs to the nuclear hormone receptor family. NR1 subfamily.

Isoforms (2)

UniProt IDNamesCanonical?
Q92753-22yes
Q92753-11

RefSeq proteins (2): NP_001351952, NP_008845* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000536Nucl_hrmn_rcpt_lig-bdDomain
IPR001628Znf_hrmn_rcptDomain
IPR001723Nuclear_hrmn_rcptFamily
IPR003079ROR_rcptFamily
IPR013088Znf_NHR/GATAHomologous_superfamily
IPR035500NHR-like_dom_sfHomologous_superfamily
IPR044101NR_DBD_RORDomain

Pfam: PF00104, PF00105

UniProt features (17 total): sequence conflict 5, sequence variant 3, zinc finger region 2, chain 1, domain 1, DNA-binding region 1, region of interest 1, short sequence motif 1, compositionally biased region 1, splice variant 1

Structure

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q92753-F179.480.59

Human Protein Atlas

Protein class: Nuclear receptors, Predicted intracellular proteins, Transcription factors, Zinc-coordinating DNA-binding domains, Disease related genes, Human disease related genes, Epilepsy

Protein evidence: Evidence at protein level

Subcellular location (HPA, imaging): nucleoplasm

Antibody reliability (HPA): IH uncertain · IF approved

Function

Pathways and Gene Ontology

Reactome pathways

1 curated (TAS) of 6; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).

6 pathways:

IDPathwayEvidence
R-HSA-383280Nuclear Receptor transcription pathwaycurated
R-HSA-9909396Circadian clock—
R-HSA-9931509Expression of BMAL (ARNTL), CLOCK, and NPAS2electronic
R-HSA-74160Gene expression (Transcription)—
R-HSA-212436Generic Transcription Pathway—
R-HSA-73857RNA Polymerase II Transcription—

MSigDB gene sets: 240 (showing top): GOBP_CIRCADIAN_RHYTHM, AAGCAAT_MIR137, WWTAAGGC_UNKNOWN, GOBP_CELLULAR_RESPONSE_TO_LIPID, TGCACTT_MIR519C_MIR519B_MIR519A, GOBP_OSTEOBLAST_DIFFERENTIATION, TATTATA_MIR374, GOBP_NEUROGENESIS, HNF1_Q6, GOBP_NEURAL_RETINA_DEVELOPMENT, LHX3_01, GOBP_CELLULAR_RESPONSE_TO_OXYGEN_CONTAINING_COMPOUND, CHANDRAN_METASTASIS_DN, MORF_RAD51L3, GOBP_REGULATION_OF_CIRCADIAN_RHYTHM

GO Biological Process (19): DNA-templated transcription (GO:0006351), regulation of DNA-templated transcription (GO:0006355), regulation of transcription by RNA polymerase II (GO:0006357), visual perception (GO:0007601), amacrine cell differentiation (GO:0035881), eye photoreceptor cell development (GO:0042462), regulation of circadian rhythm (GO:0042752), negative regulation of osteoblast differentiation (GO:0045668), negative regulation of DNA-templated transcription (GO:0045892), positive regulation of DNA-templated transcription (GO:0045893), positive regulation of transcription by RNA polymerase II (GO:0045944), retinal rod cell development (GO:0046548), retinal cone cell development (GO:0046549), rhythmic process (GO:0048511), retina development in camera-type eye (GO:0060041), cellular response to retinoic acid (GO:0071300), G protein-coupled receptor signaling pathway (GO:0007186), regulation of gene expression (GO:0010468), intracellular receptor signaling pathway (GO:0030522)

GO Molecular Function (12): RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978), DNA-binding transcription factor activity, RNA polymerase II-specific (GO:0000981), DNA-binding transcription activator activity, RNA polymerase II-specific (GO:0001228), DNA-binding transcription factor activity (GO:0003700), nuclear receptor activity (GO:0004879), zinc ion binding (GO:0008270), melatonin receptor activity (GO:0008502), sequence-specific double-stranded DNA binding (GO:1990837), DNA binding (GO:0003677), protein binding (GO:0005515), sequence-specific DNA binding (GO:0043565), metal ion binding (GO:0046872)

GO Cellular Component (3): chromatin (GO:0000785), nucleus (GO:0005634), nucleoplasm (GO:0005654)

Reactome top-level categories

4 top-level categories:

CategoryPathways
Generic Transcription Pathway1
Circadian clock1
RNA Polymerase II Transcription1
Gene expression (Transcription)1

GO top-level categories

57 GO namespaces:

CategoryTerms
regulation of DNA-templated transcription4
DNA-templated transcription3
RNA polymerase II transcription regulatory region sequence-specific DNA binding3
gene expression2
transcription by RNA polymerase II2
regulation of transcription by RNA polymerase II2
eye photoreceptor cell development2
G protein-coupled receptor activity2
DNA-binding transcription factor activity, RNA polymerase II-specific2
cellular anatomical structure2
RNA biosynthetic process1
regulation of gene expression1
regulation of RNA biosynthetic process1
sensory perception of light stimulus1
neural retina development1
central nervous system neuron differentiation1
eye photoreceptor cell differentiation1
photoreceptor cell development1
circadian rhythm1
regulation of biological process1
osteoblast differentiation1
negative regulation of cell differentiation1
regulation of osteoblast differentiation1
negative regulation of RNA biosynthetic process1
positive regulation of RNA biosynthetic process1
positive regulation of DNA-templated transcription1
retinal rod cell differentiation1
retinal cone cell differentiation1
biological_process1
camera-type eye development1
animal gross anatomical part developmental process1
response to retinoic acid1
cellular response to lipid1
cellular response to oxygen-containing compound1
signal transduction1
regulation of macromolecule biosynthetic process1
intracellular signal transduction1
cis-regulatory region sequence-specific DNA binding1
chromatin1
DNA-binding transcription factor activity1
DNA-binding transcription activator activity1
positive regulation of transcription by RNA polymerase II1
transcription cis-regulatory region binding1
transcription regulator activity1
intracellular receptor signaling pathway1
signaling receptor activity1
ligand-modulated transcription factor activity1
transition metal ion binding1
double-stranded DNA binding1
sequence-specific DNA binding1
nucleic acid binding1
binding1
DNA binding1
cation binding1
chromosome1
intracellular membrane-bounded organelle1
nuclear lumen1

Experimentally-supported GO annotations

GO terms backed by direct experimental evidence (ECO experimental codes) — 2 of 34 annotations. The rest are phylogenetic / computational / electronic (IEA).

2 experimentally-supported GO terms:

GO termNSEvidence
nucleoplasmCCdirect assay
sequence-specific double-stranded DNA bindingMFdirect assay

Protein interactions and networks

STRING

showing 15 of 1,316 interactions by confidence (×1000):

Protein AProtein BPartner UniProtScore
RORBPER3P56645935
RORBBMAL1O00327924
RORBCRY1Q16526920
RORBNPAS2Q99743918
RORBPER2O15055913
RORBNFIL3Q16649898
RORBBHLHE41Q9C0J9847
RORBBHLHE40O14503847
RORBCLOCKO15516843
RORBCRY2Q49AN0842
RORBTIMELESSQ9UNS1736
RORBCUX2O14529705
RORBCSNK1EP49674659
RORBFEZF2Q8TBJ5571
RORBLAMP5Q9UJQ1566

IntAct

Human interaction partners of RORB in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).

3 partners by confidence:

PartnerInteraction typeMIscoreRecords
BHLHE40physical association0.0001
CSNK2Bphysical association0.0001
RORCphysical association0.0001

SIGNOR signaling

showing 3 of 4 signaling interactions:

AEffectBMechanism
“all-trans-retinoic acid”“down-regulates activity”RORB“chemical inhibition”
RORB“up-regulates quantity by expression”ARNTL“transcriptional regulation”
RORB“up-regulates quantity by expression”OPN1MW“transcriptional regulation”

Ligand–receptor pairs (CellPhoneDB) (3)

Curated ligand–receptor partners (cell-cell communication), distinct from the protein–protein interactions above.

3 ligand–receptor pairs:

PartnerThis gene’s roleSignaling class
ALDH1A2receptorSignaling by Retinoic Acid
ALDH1A1receptorSignaling by Retinoic Acid
ALDH1A3receptorSignaling by Retinoic Acid

Disease & clinical

Genetic variants

Variant evidence for RORB: 478 ClinVar records (63 pathogenic / likely pathogenic); 13 GWAS associations. Per-variant detail is on Sugi Variant.

ClinVar

478 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic39
Likely pathogenic24
Uncertain significance218
Likely benign136
Benign8

Top pathogenic / likely-pathogenic (15)

Showing the 15 best-reviewed of 63 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.

Variant IDHGVSClassificationReviewSubmitters
1456655NM_006914.4(RORB):c.1114C>T (p.Arg372Ter)Pathogeniccriteria provided, multiple submitters, no conflicts3
225115NM_006914.4(RORB):c.218T>C (p.Leu73Pro)Pathogeniccriteria provided, single submitter2
807673NM_006914.4(RORB):c.357dup (p.Arg120fs)Pathogeniccriteria provided, single submitter1
1327473NM_006914.4(RORB):c.202C>T (p.Gln68Ter)Pathogeniccriteria provided, single submitter1
1384338NM_006914.4(RORB):c.673G>T (p.Glu225Ter)Pathogeniccriteria provided, single submitter1
1404805NM_006914.4(RORB):c.78_79del (p.Thr26_Cys27insTer)Pathogeniccriteria provided, single submitter1
1413758NM_006914.4(RORB):c.631G>T (p.Glu211Ter)Pathogeniccriteria provided, single submitter1
1452736NM_006914.4(RORB):c.445del (p.Leu149fs)Pathogeniccriteria provided, single submitter1
1678868NM_006914.4(RORB):c.61del (p.His21fs)Pathogeniccriteria provided, single submitter1
1700119NM_006914.4(RORB):c.423T>G (p.Tyr141Ter)Pathogeniccriteria provided, single submitter1
2023022NM_006914.4(RORB):c.816C>A (p.Tyr272Ter)Pathogeniccriteria provided, single submitter1
2028548NM_006914.4(RORB):c.463dup (p.Tyr155fs)Pathogeniccriteria provided, single submitter1
2134793NM_006914.4(RORB):c.41dup (p.Asp15fs)Pathogeniccriteria provided, single submitter1
2501689NM_006914.4(RORB):c.1069del (p.Glu357fs)Pathogeniccriteria provided, single submitter1
2662614NM_006914.4(RORB):c.566del (p.Val189fs)Pathogeniccriteria provided, single submitter1

Per-variant reference — Sugi Variant

Explore RORB’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.

SpliceAI

Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 35 predictions of 1,097):

Position(s)EffectΔscoreSites
9:74497984–74497985donor_loss1.00004
9:74630280–74630281acceptor_loss1.00006
9:74634629acceptor_gain1.0000
9:74642408acceptor_gain1.0000
9:74642816–74642817donor_loss1.00005
9:74660614acceptor_gain1.0000
9:74660615–74660616acceptor_loss1.00006
9:74662472acceptor_gain1.0000
9:74662472–74662473acceptor_loss1.00005
9:74662607–74662608donor_loss1.00005

AlphaMissense

1,438 missense substitutions predicted likely pathogenic (of 3,046 scored), across 313 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:

ResidueLikely-pathogenic substitutionsMean am_pathogenicityMax am_pathogenicity
M8690.9991.000
M9690.9961.000
M31890.8550.995
H3281.0001.000
D2680.9991.000
F4480.9991.000
N7180.9991.000
D30180.9991.000
F4580.9981.000
D8980.9981.000
F9380.9971.000
F29480.9961.000
D6680.9950.999
S4880.9931.000
D10280.9890.999
H43480.9870.998
F34180.9840.999
F46180.9810.998
F45380.9780.998
F28780.9701.000

HPA cancer prognostics

RNA cancer specificity: Group enriched (Glioblastoma Multiforme, Prostate Adenocarcinoma)

Disease associations

OMIM: gene MIM:601972 | disease phenotypes: MIM:618357

GenCC curated gene-disease

2 curated gene-disease records:

DiseaseClassificationInheritanceRecords
epilepsy, idiopathic generalized, susceptibility to, 15StrongAutosomal dominant3
complex neurodevelopmental disorderModerateAutosomal dominant

ClinGen Gene-Disease Validity

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

1 validity classifications:

DiseaseClassificationInheritance
complex neurodevelopmental disorderDefinitiveAD

Genomics England panels (PanelApp)

Clinical diagnostic gene panels including this gene (4 panels, 4 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.

4 panels:

PanelRating
DDG2Pgreen
Early onset or syndromic epilepsygreen
Paediatric disordersgreen
Unexplained death in infancy and sudden unexplained death in childhoodgreen

Mondo (3): epilepsy, idiopathic generalized, susceptibility to, 15 (MONDO:0032699), epilepsy (MONDO:0005027), complex neurodevelopmental disorder (MONDO:0100038)

HPO phenotypes

15 phenotypes (HPO-id order):

HPOTerm
HP:0000006Autosomal dominant inheritance
HP:0000708Atypical behavior
HP:0000718Aggressive behavior
HP:0000750Delayed speech and language development
HP:0000992Cutaneous photosensitivity
HP:0001250Seizure
HP:0001263Global developmental delay
HP:0001336Myoclonus
HP:0002069Bilateral tonic-clonic seizure
HP:0002121Generalized non-motor (absence) seizure
HP:0003593Infantile onset
HP:0003621Juvenile onset
HP:0003829Typified by incomplete penetrance
HP:0011463Childhood onset
HP:0025097Eyelid myoclonus

GWAS associations

13 associations:

StudyTraitp-value
GCST010002_298Refractive error6e-36
GCST006976_53Macular thickness3e-13
GCST007576_164Chronotype1e-12
GCST006291_22Spherical equivalent or myopia (age of diagnosis)1e-11
GCST90002387_98Immature fraction of reticulocytes2e-10
GCST003219_26Advanced age-related macular degeneration3e-9
GCST007328_75Alcohol consumption (drinks per week)3e-8
GCST001858_13Refractive error4e-8
GCST012401_74Hyperopia8e-8
GCST012400_98Low myopia vs hyperopia4e-7
GCST007830_3Anti-thyroid peroxidase (TPOAb) levels in Hashimoto’s thyroiditis1e-6
GCST007851_6Anti-thyroid peroxidase (TPOAb) and anti-thyroglobulin (TgAb) levels in Hashimoto’s thyroiditis5e-6
GCST001524_7Visceral adipose tissue/subcutaneous adipose tissue ratio9e-6

EFO canonical traits (from GWAS)

4 canonical traits:

EFO IDTrait name
EFO:0004767visceral:subcutaneous adipose tissue ratio
EFO:1001492atrophic macular degeneration
EFO:0004847age at onset
EFO:0008328chronotype measurement

MeSH disease descriptors

1 disease descriptors:

DescriptorNameTree numbers
D004827EpilepsyC10.228.140.490

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL3091268 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 196,754 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

2 molecules by phase:

MoleculeNamePhasePatents
CHEMBL38TRETINOIN4195,980
CHEMBL4472508CINTIRORGON1774

PharmGKB: 1 entry (CPIC guideline: no)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: nhr — 1F. Retinoic acid-related orphans

Most potent curated ligand interactions (3 total), top 3:

LigandActionAffinityParameter
ALRT 1550Antagonist10.4pIC50
CD2314Agonist6.84pKd
all-trans-4-oxo-retinoic acidAntagonist6.1pKi

Binding affinities (BindingDB)

234 measured of 394 human assays (395 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValuePatent
3-[[5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC500.43 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-N-(oxan-4-yl)-1,3-thiazole-2-carboxamideIC501 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
N-(3-amino-2,2-dimethyl-3-oxopropyl)-5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carboxamideIC501 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
3-[[5-[4-(tert-butylsulfamoyl)-5,6,7,8-tetrahydronaphthalen-1-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC501 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
3-[[4-(cyclohexylmethyl)-5-[3-(1-methylcyclopropyl)-5-[[(2S)-1,1,1-trifluoropropan-2-yl]carbamoyl]phenyl]-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC501 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
3-[[4-(cyclohexylmethyl)-5-[4-(2-methylbutan-2-ylsulfamoyl)naphthalen-1-yl]-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC501 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
3-[[5-[2-chloro-3-methyl-4-(2-methylbutan-2-ylsulfamoyl)phenyl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC501 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
trans-3-(4-(Cyclohexylmethyl-5-(4-(N-(4-fluoro-2-methylbutan-2-yl)sulfamoyl)naphthalen-1-yl)thiazole-2-carboxamido)cyclobutanecarboxylic acidIC501.26 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
CHEMBL4128427IC503.4 nM
3-[[5-[4-(tert-butylsulfamoyl)-2-(difluoromethoxy)-3-methylphenyl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC503.98 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
5-[4-[(1-cyanocyclopropyl)sulfamoyl]naphthalen-1-yl]-4-(cyclohexylmethyl)-N-(2-hydroxy-2-methylpropyl)-1,3-thiazole-2-carboxamideIC503.98 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-N-[(1,1-dioxothietan-3-yl)methyl]-1,3-thiazole-2-carboxamideIC503.98 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
N-tert-butyl-4-[4-(cyclohexylmethyl)-2-(2,2-dioxo-2lambda6-thia-6-azaspiro[3.3]heptane-6-carbonyl)-1,3-thiazol-5-yl]naphthalene-1-sulfonamideIC507.94 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
4-(cyclopropylmethyl)-N-(2-hydroxy-2-methylpropyl)-5-[4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]naphthalen-1-yl]-1,3-thiazole-2-carboxamideIC507.94 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-N-(2-morpholin-4-ylethyl)-1,3-thiazole-2-carboxamideIC5010 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
3-[[5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]bicyclo[1.1.1]pentane-1-carboxylic acidIC5010 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
5-[1-(tert-butylsulfamoyl)isoquinolin-4-yl]-4-(cyclohexylmethyl)-N-(2-hydroxy-2-methylpropyl)-1,3-thiazole-2-carboxamideIC5010 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
4-tert-butyl-5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-N-(1,1-dioxothian-4-yl)-1,3-thiazole-2-carboxamideIC5010 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
N-tert-butyl-4-[4-(cyclohexylmethyl)-2-(7,7-dioxo-7lambda6-thia-2-azaspiro[3.5]nonane-2-carbonyl)-1,3-thiazol-5-yl]naphthalene-1-sulfonamideIC5010 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
CHEMBL4130294IC5013 nM
CHEMBL4292343IC5015 nM
CHEMBL4129790IC5016 nM
3-[[5-[1-(tert-butylsulfamoyl)isoquinolin-4-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC5020 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
3-[[4-(cyclohexylmethyl)-5-[4-[(4-hydroxy-2-methylbutan-2-yl)sulfamoyl]naphthalen-1-yl]-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC5020 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
4-(cyclobutylmethyl)-5-[2-(difluoromethyl)-4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]phenyl]-N-(2-hydroxy-2-methylpropyl)-1,3-thiazole-2-carboxamideIC5025.1 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
CHEMBL4289114IC5026 nM
3-[[5-[3-(tert-butylcarbamoyl)-5-(1-methylcyclopropyl)phenyl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC5031.6 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
CHEMBL4284016IC5034 nM
CHEMBL4276720IC5040 nM
N-tert-butyl-2,3-dichloro-4-[4-(cyclohexylmethyl)-2-(2,2-dioxo-2lambda6-thia-6-azaspiro[3.3]heptane-6-carbonyl)-1,3-thiazol-5-yl]benzenesulfonamideIC5050.1 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
CHEMBL4126690IC5053 nM
CHEMBL4226645IC5063 nM
CHEMBL4284644IC5087 nM
CHEMBL4225823IC5090 nM
CHEMBL4286904IC5090 nM
CHEMBL4293341IC5090 nM
CHEMBL4288028IC5094 nM
2-[1-[5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]azetidin-3-yl]-2-methylpropanoic acidIC50100 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
CHEMBL4226392IC50110 nM
CHEMBL4225808IC50110 nM
CHEMBL4127926IC50119 nM
CHEMBL4227190IC50120 nM
3-[[5-[4-(tert-butylsulfamoyl)-2,3-dichlorophenyl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acidIC50126 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
CHEMBL4228640IC50130 nM
CHEMBL4281271IC50130 nM
CHEMBL4227927IC50140 nM
3-[5-[4-(cyclobutylmethyl)-5-[2,3-dichloro-4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]phenyl]-1,3-thiazol-2-yl]-1,3-thiazol-2-yl]-2,2-dimethylpropanoic acidIC50148 nMUS-10080744: Thiazoles as modulators of RORγt
5-[4-(tert-butylsulfamoyl)-3-chloro-2-(difluoromethyl)phenyl]-4-(cyclohexylmethyl)-N-(2-hydroxy-2-methylpropyl)-1,3-thiazole-2-carboxamideIC50158 nMUS-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ]
CHEMBL4225264IC50160 nM
CHEMBL4227867IC50160 nM

ChEMBL bioactivities

237 potent at pChembl≥5 of 291 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
9.82IC500.15nMTRETINOIN
8.48Kd3.3nMCHEMBL4129790
8.47IC503.4nMCHEMBL4128427
8.33Kd4.7nMCHEMBL4130294
8.04Kd9.1nMCHEMBL4128427
8.00Kd10nMCHEMBL4126690
7.89IC5013nMCHEMBL4130294
7.89Kd13nMCHEMBL4128042
7.82IC5015nMCHEMBL4292343
7.80IC5016nMCHEMBL4129790
7.80IC5016nMCHEMBL4632490
7.75Kd18nMCHEMBL4126534
7.58IC5026nMCHEMBL4289114
7.47IC5034nMCHEMBL4284016
7.40IC5040nMCHEMBL4276720
7.37Kd43nMCHEMBL4127926
7.30IC5050nMCHEMBL4649210
7.28IC5053nMCHEMBL4126690
7.23IC5059nMCHEMBL4225808
7.21Kd62nMCHEMBL4642674
7.20IC5063.1nMCHEMBL3105681
7.20IC5063nMCHEMBL4226645
7.19IC5064nMCHEMBL3105681
7.12IC5076nMCHEMBL4291888
7.10IC5079.43nMCHEMBL3105681
7.08IC5083nMCHEMBL4128042
7.07Kd86nMCHEMBL4127282
7.06IC5087nMCHEMBL4284644
7.05IC5090nMCHEMBL4225823
7.05IC5090nMCHEMBL4293341
7.05IC5090nMCHEMBL4286904
7.03IC5094nMCHEMBL4288028
6.96IC50110nMCHEMBL4226392
6.94IC50115nMCHEMBL4126534
6.94Kd115nMCHEMBL4647899
6.92IC50119nMCHEMBL4127926
6.92IC50120nMCHEMBL4227190
6.90IC50125.9nMTRETINOIN
6.89IC50130nMCHEMBL4228640
6.89IC50130nMCHEMBL4281271
6.85IC50140nMCHEMBL4227927
6.83IC50148nMCHEMBL4645288
6.82Ki151nMCHEMBL5902122
6.81IC50154nMCHEMBL4126366
6.80IC50160nMCHEMBL4225264
6.80IC50160nMCHEMBL4227867
6.79IC50164nMCHEMBL4128926
6.79IC50163nMCHEMBL4128262
6.75IC50176nMCHEMBL4130137
6.75IC50180nMCHEMBL4290788

PubChem BioAssay actives

226 with measured affinity, of 621 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
3-[[4-(cyclohexylmethyl)-5-[3-(1-methylcyclopropyl)-5-[[(2S)-1,1,1-trifluorobutan-2-yl]carbamoyl]phenyl]-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494613: Binding affinity to recombinant human RORbeta LBD (201 to 452 residues) expressed in Escherichia coli BL21 (DE3) GOLD by 1,8-ANS dye-based thermofluor assaykd0.0033uM
3-[[5-[3-tert-butyl-5-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]phenyl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494616: Inverse agonist activity at human GAL4 DBD-fused RORbeta LBD (201 to 452 residues) expressed in HEK293T cells assessed as reduction in ROR mediated transcriptional activity after 24 hrs by dual glo luciferase reporter gene assayic500.0034uM
5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-N-[(4-ethylsulfonylphenyl)methyl]-1,3-thiazole-2-carboxamide1494613: Binding affinity to recombinant human RORbeta LBD (201 to 452 residues) expressed in Escherichia coli BL21 (DE3) GOLD by 1,8-ANS dye-based thermofluor assaykd0.0047uM
3-[[5-[3-tert-butyl-5-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)phenyl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494613: Binding affinity to recombinant human RORbeta LBD (201 to 452 residues) expressed in Escherichia coli BL21 (DE3) GOLD by 1,8-ANS dye-based thermofluor assaykd0.0100uM
[5-amino-3-(3,5-dichlorophenyl)thiophen-2-yl]-(2-chlorophenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0100uM
3-[[4-(cyclohexylmethyl)-5-[3-(1-methylcyclopropyl)-5-[[(2S)-1,1,1-trifluoropropan-2-yl]carbamoyl]phenyl]-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494613: Binding affinity to recombinant human RORbeta LBD (201 to 452 residues) expressed in Escherichia coli BL21 (DE3) GOLD by 1,8-ANS dye-based thermofluor assaykd0.0130uM
[3-(3-bromo-5-propan-2-yloxyphenyl)thiophen-2-yl]-(2-chlorophenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0150uM
3-[5-[4-(cyclobutylmethyl)-5-[2,3-dichloro-4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]phenyl]-1,3-thiazol-2-yl]-1,3,4-thiadiazol-2-yl]-2,2-dimethylpropanoic acid1662537: Binding affinity to recombinant human RORbeta transfected in human HEK293T cells incubated for 24 hrs by dual-glo luciferase reporter gene assayic500.0160uM
3-[[5-[3-(tert-butylcarbamoyl)-5-(1-methylcyclopropyl)phenyl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494613: Binding affinity to recombinant human RORbeta LBD (201 to 452 residues) expressed in Escherichia coli BL21 (DE3) GOLD by 1,8-ANS dye-based thermofluor assaykd0.0180uM
[4-[3-bromo-5-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]-(2-chlorophenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0260uM
(2-chlorophenyl)-[4-[3-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0340uM
[5-amino-3-[3-(trifluoromethyl)phenyl]thiophen-2-yl]-(2-chlorophenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0400uM
3-[[5-[3-tert-butyl-5-[[(2S)-1,1,1-trifluoropropan-2-yl]carbamoyl]phenyl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494613: Binding affinity to recombinant human RORbeta LBD (201 to 452 residues) expressed in Escherichia coli BL21 (DE3) GOLD by 1,8-ANS dye-based thermofluor assaykd0.0430uM
3-[6-[4-(cyclobutylmethyl)-5-[2,3-dichloro-4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]phenyl]-1,3-thiazol-2-yl]pyrimidin-4-yl]-2,2-dimethylpropanoic acid1662537: Binding affinity to recombinant human RORbeta transfected in human HEK293T cells incubated for 24 hrs by dual-glo luciferase reporter gene assayic500.0500uM
N-[5-(2-chlorobenzoyl)-4-(2-chlorophenyl)-1,3-thiazol-2-yl]-2-(4-ethylsulfonylphenyl)acetamide1390733: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) at after 1 hr by scintillation proximity assayic500.0590uM
3-[5-[5-[2-(difluoromethyl)-3-fluoro-4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]phenyl]-4-[(3,3-difluoropiperidin-1-yl)methyl]-1,3-thiazol-2-yl]-1,3,4-oxadiazol-2-yl]-2,2-dimethylpropanoic acid1662569: Binding affinity to RORbeta (unknown origin) assessed as dissociation constant by thermal shift binding assaykd0.0620uM
[2-amino-4-[3-bromo-5-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]-(2-chlorophenyl)methanone1390733: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) at after 1 hr by scintillation proximity assayic500.0630uM
N-[5-(2-chlorobenzoyl)-4-(3-chlorophenyl)-1,3-thiazol-2-yl]-2-(4-ethylsulfonylphenyl)acetamide1168691: Inverse agonist activity at RORbeta (unknown origin) by M1H assayic500.0631uM
[5-amino-3-[3-(trifluoromethyl)phenyl]thiophen-2-yl]-(2-methoxyphenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0760uM
3-[[4-(cyclohexylmethyl)-5-[4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]naphthalen-1-yl]-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494613: Binding affinity to recombinant human RORbeta LBD (201 to 452 residues) expressed in Escherichia coli BL21 (DE3) GOLD by 1,8-ANS dye-based thermofluor assaykd0.0860uM
(2-chlorophenyl)-[3-(2-chloro-4-pyridinyl)thiophen-2-yl]methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0870uM
[2-amino-4-[3-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]-[2-(trifluoromethyl)phenyl]methanone1390733: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) at after 1 hr by scintillation proximity assayic500.0900uM
[4-amino-2-[3-(trifluoromethyl)phenyl]phenyl]-(2-chlorophenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0900uM
(2-chlorophenyl)-(3-naphthalen-1-ylthiophen-2-yl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0900uM
(2-methoxyphenyl)-[4-[3-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.0940uM
[2-amino-4-[3-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]-(2-bromophenyl)methanone1390733: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) at after 1 hr by scintillation proximity assayic500.1100uM
3-[4-(cyclobutylmethyl)-5-[2,3-dichloro-4-[[(2S)-1,1,1-trifluorobutan-2-yl]sulfamoyl]phenyl]-1,3-thiazol-2-yl]-2,2-dimethylpropanoic acid1662569: Binding affinity to RORbeta (unknown origin) assessed as dissociation constant by thermal shift binding assaykd0.1150uM
[2-amino-4-[4-chloro-3-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]-(2-chlorophenyl)methanone1390733: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) at after 1 hr by scintillation proximity assayic500.1200uM
tretinoin1168691: Inverse agonist activity at RORbeta (unknown origin) by M1H assayic500.1259uM
[2-amino-4-[3-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]-[2-fluoro-6-(trifluoromethyl)phenyl]methanone1390733: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) at after 1 hr by scintillation proximity assayic500.1300uM
[5-amino-3-(3-chlorophenyl)thiophen-2-yl]-(2-methoxyphenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.1300uM
[2-amino-4-[3-chloro-5-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]-(2-chlorophenyl)methanone1390733: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) at after 1 hr by scintillation proximity assayic500.1400uM
3-[5-[4-(cyclobutylmethyl)-5-[2,3-dichloro-4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]phenyl]-1,3-thiazol-2-yl]-1,3-thiazol-2-yl]-2,2-dimethylpropanoic acid1662537: Binding affinity to recombinant human RORbeta transfected in human HEK293T cells incubated for 24 hrs by dual-glo luciferase reporter gene assayic500.1480uM
3-[[5-[4-(tert-butylsulfamoyl)-5,6,7,8-tetrahydronaphthalen-1-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494616: Inverse agonist activity at human GAL4 DBD-fused RORbeta LBD (201 to 452 residues) expressed in HEK293T cells assessed as reduction in ROR mediated transcriptional activity after 24 hrs by dual glo luciferase reporter gene assayic500.1540uM
[2-amino-4-[4-chloro-3-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]-(2-methoxyphenyl)methanone1390733: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) at after 1 hr by scintillation proximity assayic500.1600uM
[2-amino-4-[3-bromo-5-(trifluoromethyl)phenyl]-1,3-thiazol-5-yl]-(2-methoxyphenyl)methanone1390733: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) at after 1 hr by scintillation proximity assayic500.1600uM
5-[4-[(1-cyanocyclopropyl)sulfamoyl]naphthalen-1-yl]-4-(cyclohexylmethyl)-N-(2-hydroxy-2-methylpropyl)-1,3-thiazole-2-carboxamide1494616: Inverse agonist activity at human GAL4 DBD-fused RORbeta LBD (201 to 452 residues) expressed in HEK293T cells assessed as reduction in ROR mediated transcriptional activity after 24 hrs by dual glo luciferase reporter gene assayic500.1630uM
3-[[5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494616: Inverse agonist activity at human GAL4 DBD-fused RORbeta LBD (201 to 452 residues) expressed in HEK293T cells assessed as reduction in ROR mediated transcriptional activity after 24 hrs by dual glo luciferase reporter gene assayic500.1640uM
4-[(3,3-difluorocyclobutyl)methyl]-N-(2-hydroxy-2-methylpropyl)-5-[4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]naphthalen-1-yl]-1,3-thiazole-2-carboxamide1494616: Inverse agonist activity at human GAL4 DBD-fused RORbeta LBD (201 to 452 residues) expressed in HEK293T cells assessed as reduction in ROR mediated transcriptional activity after 24 hrs by dual glo luciferase reporter gene assayic500.1760uM
(2-chlorophenyl)-[2-[3-(trifluoromethyl)phenyl]phenyl]methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.1800uM
[3-(3-chlorophenyl)thiophen-2-yl]-(2-methoxyphenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.1800uM
5-[2,3-dichloro-4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]phenyl]-4-[(4-fluorophenyl)methyl]-N-(2-hydroxy-2-methylpropyl)-1,3-thiazole-2-carboxamide1494616: Inverse agonist activity at human GAL4 DBD-fused RORbeta LBD (201 to 452 residues) expressed in HEK293T cells assessed as reduction in ROR mediated transcriptional activity after 24 hrs by dual glo luciferase reporter gene assayic500.1840uM
3-[3-[4-(cyclobutylmethyl)-5-[2,3-dichloro-4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]phenyl]-1,3-thiazol-2-yl]-1,2-oxazol-5-yl]-2,2-dimethylpropanoic acid1662537: Binding affinity to recombinant human RORbeta transfected in human HEK293T cells incubated for 24 hrs by dual-glo luciferase reporter gene assayic500.1890uM
3-[[4-(cyclobutylmethyl)-5-[4-[[(2S)-1,1,1-trifluoropropan-2-yl]sulfamoyl]naphthalen-1-yl]-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494613: Binding affinity to recombinant human RORbeta LBD (201 to 452 residues) expressed in Escherichia coli BL21 (DE3) GOLD by 1,8-ANS dye-based thermofluor assaykd0.2000uM
[5-amino-3-(3,5-dichlorophenyl)thiophen-2-yl]-(2-methoxyphenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.2000uM
(2-methoxyphenyl)-[3-[3-(trifluoromethyl)phenyl]thiophen-2-yl]methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.2200uM
[3-(2-chloro-4-pyridinyl)thiophen-2-yl]-(2-methoxyphenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.2300uM
(2-chlorophenyl)-[3-[3-(trifluoromethyl)phenyl]thiophen-2-yl]methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.2300uM
3-[[4-(cyclohexylmethyl)-5-[4-(2-methylbutan-2-ylsulfamoyl)naphthalen-1-yl]-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid1494613: Binding affinity to recombinant human RORbeta LBD (201 to 452 residues) expressed in Escherichia coli BL21 (DE3) GOLD by 1,8-ANS dye-based thermofluor assaykd0.2400uM
[5-amino-3-[3,5-bis(trifluoromethyl)phenyl]thiophen-2-yl]-(2-chlorophenyl)methanone1420199: Displacement of [3H]-T0901317 from recombinant human His-SUMO-tagged RORbeta LBD (71 to 459 residues) expressed in Escherichia coli BL21(DE3) after 1 hr by TopCount scintillation proximity assayic500.2400uM

CTD chemical–gene interactions

36 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Valproic Aciddecreases expression, increases expression4
Progesteroneaffects cotreatment, increases expression3
arseniteaffects binding, decreases reaction, increases methylation2
Benzo(a)pyreneaffects methylation, increases methylation2
Lipopolysaccharidesaffects response to substance, affects cotreatment, decreases expression, decreases reaction, increases expression2
Tretinoinaffects binding, decreases expression2
Aflatoxin B1affects expression, increases methylation2
pirinixic acidincreases activity, affects binding, decreases expression1
bisphenol Aincreases methylation, affects cotreatment1
trichostatin Aincreases expression1
benzo(e)pyreneincreases methylation1
aflatoxin B2increases methylation1
triadimefonincreases expression1
S-(1,2-dichlorovinyl)cysteineaffects response to substance, increases expression, affects cotreatment1
beta-methylcholineaffects expression1
tebufenozideincreases activity1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, decreases expression1
ICG 001affects expression, affects reaction, decreases expression1
dorsomorphinaffects cotreatment, decreases expression1
licochalcone Bdecreases expression1
bisphenol Saffects cotreatment, increases methylation1
(+)-JQ1 compoundincreases expression1
Sevofluranedecreases reaction, increases expression, decreases expression1
Temozolomideincreases expression1
Arsenic Trioxideaffects expression, affects reaction, decreases expression, increases expression1
Fulvestrantaffects cotreatment, increases methylation1
Acetaminophenincreases expression1
Estradiolaffects cotreatment, increases expression1
Methapyrileneincreases methylation1
Methotrexateincreases expression1

ChEMBL screening assays

90 unique, capped per target: 87 binding, 3 functional

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL3097486BindingInverse agonist activity at GAL4-fused human RORb expressed in HEK293T cells assessed as suppression of basal transcriptional activity after 20 hrs by dual-glo luciferase reporter gene assayStructure-based design of substituted hexafluoroisopropanol-arylsulfonamides as modulators of RORc. — *Bioorg Med Chem Lett*
CHEMBL5723472FunctionalAffinity On-target Cellular interaction: (Reporter gene assay (HEK293T cells)) EUB0001157a RORBAffinity On-target Cellular Literature for EUbOPEN Chemogenomic Library

Cellosaurus cell lines

4 cell lines: 3 embryonic stem cell, 1 induced pluripotent stem cell

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_A4ZUZZUNEUi019-AInduced pluripotent stem cellFemale
CVCL_A5W8SEES3-1V human RORB, clone1Embryonic stem cellMale
CVCL_A5W9SEES3-1V human RORB, clone2Embryonic stem cellMale
CVCL_A5X0SEES3-1V human RORB, clone3Embryonic stem cellMale

Clinical trials (associated diseases)

Via MONDO — disease-level, not drug-specific.

showing 60 of 302 trials:

NCTPhaseStatusTitle
NCT00004637Phase 4COMPLETEDDouble-Blind, Placebo-Controlled Trial of Vitamin E as Add-on Therapy for Children With Epilepsy
NCT00043914Phase 4COMPLETEDMeasurement Of Serum Levels Of Two Antiepileptic Drugs During Conversion In Patients With Epilepsy
NCT00132223Phase 4UNKNOWNEffects on the Diagnostic Accuracy of Magnetic Imaging Angiographies of the Supra-Aortic Vessels by Three Different Magnetic Resonance Contrast Agents in Patients
NCT00133081Phase 4UNKNOWNStudy to Improve the Treatment of Epilepsy (SITE)
NCT00137709Phase 4UNKNOWNHormone Profiles in Adults With Newly Diagnosed Epilepsy
NCT00154076Phase 4COMPLETEDA Multicenter Comparative Trial of Zonisamide and Topiramate as Initial Monotherapy in Untreated Epilepsies
NCT00165828Phase 4TERMINATEDEfficacy and Safety of an add-on Treatment With Zonisamide in Adults With Focal Epileptic Seizures With or Without Secondary Generalization
NCT00181116Phase 4COMPLETEDLevetiracetam for Benign Rolandic Epilepsy
NCT00207935Phase 4COMPLETEDUse of Sustained Release Antiepileptic Medication (Depakote® ER) for Pediatric Epilepsy in a Mental Retardation/Developmental Disorder Population
NCT00215592Phase 4COMPLETEDOpen Label, Zonegran (Zonisamide) In Partial Onset Seizures
NCT00266604Phase 4COMPLETEDA Study to Evaluate the Dosing, Effectiveness and Safety of Topiramate for the Treatment of Epilepsy
NCT00288639Phase 4COMPLETEDLyrica (Pregabalin) Administered as an Add-on Therapy for Partial Seizures (LEADER).
NCT00312676Phase 4UNKNOWNCompare Tolerability of an Overnight Switch to Gradual Switch Between Two Different Forms of Depakote
NCT00323947Phase 4COMPLETEDMethylphenidate for Treating Attention Deficit Hyperactivity Disorder in Children With Both ADHD and Epilepsy
NCT00385411Phase 4COMPLETEDStudy of Valproate in Young Patients Suffering From Epilepsy
NCT00522418Phase 4TERMINATEDStudy Comparing Best Medical Practice With or Without VNS Therapy in Pharmacoresistant Partial Epilepsy Patients
NCT00537940Phase 4COMPLETEDComparative Study Of Pregabalin And Gabapentin As Adjunctive Therapy In Subjects With Partial Seizures
NCT00552526Phase 4UNKNOWNKetogenic Diet vs.Antiepileptic Drug Treatment in Drug Resistant Epilepsy
NCT00564915Phase 4COMPLETEDRCT of the Efficacy of the Ketogenic Diet in the Treatment of Epilepsy
NCT00571155Phase 4COMPLETEDTrial of Levetiracetam in Patients With Primary Brain Tumors and Symptomatic Seizures Who Undergo Surgery
NCT00572195Phase 4COMPLETEDRNS® System LTT Study
NCT00610532Phase 4TERMINATEDEvaluating the Transporter Protein Inhibitor Probenecid In Patients With Epilepsy
NCT00630357Phase 4COMPLETEDTrial to Evaluate the Safety and Efficacy of Keppra After Conversion to Mono-therapy in Subjects With Partial Epilepsy
NCT00630630Phase 4COMPLETEDStudy on Safety and Efficacy of Levetiracetam in the Adjunctive Treatment of Female Subjects With C1 Catamenial Epilepsy
NCT00630968Phase 4COMPLETEDS.K.A.T.E.: Safety of Keppra as Adjunctive Therapy in Epilepsy
NCT00631150Phase 4COMPLETEDA Phase IV-Pharmacovigilance Study of Keppra Greece - S.K.A.T.E.: Safety of Keppra as Adjunctive Therapy in Epilepsy
NCT00659958Phase 4COMPLETEDZAGAL Study: Evaluating Effectiveness and Tolerability of Zonisamide as Adjunctive Therapy in Patients With Partial Onset Seizures Treated With Two Antiepileptic Drugs
NCT00713622Phase 4COMPLETEDComparing The Effect On Cognition Of Adjunctive Therapy With Zonisamide Versus Sodium Valproate
NCT00807989Phase 4COMPLETEDThe Efficacy and Safety of Low Dose Combination of LTG and VPA Compared to CBZ Monotherapy
NCT00832884Phase 4COMPLETEDThe Safety of Intravenous Lacosamide
NCT00869622Phase 4COMPLETEDAntiepileptic Drugs and Osteoporotic Prevention Trial
NCT00896987Phase 4COMPLETEDLamotrigine Cognitive Function Study in Adult Untreated Epilepsies
NCT00952081Phase 4COMPLETEDA Pilot Study to Evaluate Efficacy and Safety of Clevidipine in Neurosurgical Patients
NCT01118455Phase 4TERMINATEDTrial to Assess Vagus Nerve Stimulation Therapy vs. Anti-Epileptic Drug (AED) Treatment in Children With Refractory Seizures
NCT01127165Phase 4COMPLETEDLow and High Dose Zonisamide in Children as Monotherapy
NCT01127256Phase 4COMPLETEDComparative Study of Zonisamide and Carbamazepine as an Initial Monotherapy: Efficacy and Safety Evaluation
NCT01140867Phase 4COMPLETEDOpen-label, Multi-center Trial of Zonisamide as Adjunctive Therapy in Patients With Uncontrolled Partial Epilepsy
NCT01175954Phase 4COMPLETEDCognitive and Behavioral Effects of Lacosamide
NCT01229735Phase 4COMPLETEDLevetiracetam Versus Topiramate as Adjunctive Therapy to Evaluate Efficacy and Safety in Subjects With Refractory Partial Onset Seizures
NCT01244724Phase 4TERMINATEDLexapro for Major Depression in Patients With Epilepsy
NCT01309074Phase 4WITHDRAWNDoes Pregabalin Improve Symptoms of Anxiety in Patients With Epilepsy? A Comparison With Sertraline
NCT01318408Phase 4COMPLETEDLevetiracetam: The Anti-Convulsant of Choice for Elderly Patients With Dementia
NCT01498822Phase 4COMPLETEDLevetiracetam Versus Oxcarbazepine as Monotherapy to Evaluate Efficacy and Safety in Subjects With Newly or Recently Diagnosed Partial Epilepsy
NCT01546688Phase 4TERMINATEDA Study to Evaluate the Safety and Tolerability and Explore the Efficacy of Zonisamide as add-on Therapy in Elderly Patients With Refractory Partial Seizures
NCT01607346Phase 4TERMINATEDAn Open Label Study to Evaluate the Effects of Ezogabine/Retigabine Added to Existing Anti-epileptic Drug(s) on Urinary Voiding Function in Subjects With Partial Onset Seizures
NCT01627860Phase 4COMPLETEDFirst Add-on vs. Mono-therapy Study of Topiramate in Neuro-Surgical Patients
NCT01689649Phase 4COMPLETEDA Study to Assess Tolerability and Efficacy of Topiramate Monotherapy in Recently Diagnosed Patients With Epilepsy
NCT01713777Phase 4COMPLETEDEquivalence Among Antiepileptic Drug Generic and Brand Products in People With Epilepsy: Chronic-Dose 4-Period Replicate Design
NCT01733394Phase 4COMPLETEDEquivalence Among Antiepileptic Drug Generic and Brand Products in People With Epilepsy: Single-Dose 6-Period Replicate Design (EQUIGEN Single-Dose Study)
NCT01804322Phase 4COMPLETEDStandardized Educational Plan for Epilepsy Patients With Comorbidities
NCT01932502Phase 4UNKNOWNEvaluation of Onfi Conversion Therapy Replacing Clonazepam in Patients With Medically Refractory Epilepsy
NCT01995825Phase 4COMPLETEDLamotrigine Bioequivalence
NCT02100644Phase 4COMPLETEDValproate Dose Reduction and Its Clinical Evaluation by Introducing Lamotrigine in Japanese Women With Epilepsy - Single Arm, Multicenter, and Open-label Study
NCT02178995Phase 4COMPLETEDMethylphenidate Treatment of Attention Deficits in Epilepsy
NCT02205931Phase 4UNKNOWNKetogenic Diet in Infants With Epilepsy (KIWE)
NCT02362373Phase 4COMPLETEDWomen With Epilepsy: a Pilot Study of PK and PD Anti-epileptic Drug Effects in Levonorgestrel Intrauterine System Users
NCT02404168Phase 4COMPLETEDBEEP Follow Up: Evaluation of Repeatability of Lamotrigine Pharmacokinetics in Epileptic Patients
NCT02429596Phase 4UNKNOWNA Trial of Generic Substitution of Antiepileptic Drugs
NCT02633241Phase 4COMPLETEDA Pilot Study of Dexmedetomidine-Propofol in Children Undergoing Magnetic Resonance Imaging
NCT02645279Phase 4UNKNOWNComparison of Oral 30 % Dextrose and iv Midazolam Sedation During MRI in Neonates

Predicted chemistry — Sugi Predict

The predicted patent-compound landscape for RORB across ~30M SureChEMBL compounds — explore on Sugi Predict.