RPH3AL-AS2

Summary

RPH3AL-AS2 (RPH3AL antisense RNA 2, HGNC:56089) is a long non-coding RNA gene on chromosome 17p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56089
Approved symbol	RPH3AL-AS2
Name	RPH3AL antisense RNA 2
Location	17p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000262294
Ensembl biotype	lncRNA
Entrez	123706508
RNAcentral	URS0002A590D9 — lncRNA, 1972 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000571512, ENST00000572499, ENST00000717666, ENST00000717667, ENST00000792825

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000571512 — 2 exons

Exon	Start	End
ENSE00002632274	354737	355469
ENSE00004033090	356703	357581

Expression profiles

Bgee: expression breadth ubiquitous, 105 present calls, max score 77.16.

Top tissues by expression

105 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right lobe of liver	UBERON:0001114	77.16	gold quality
liver	UBERON:0002107	73.54	gold quality
adult mammalian kidney	UBERON:0000082	73.37	gold quality
metanephros cortex	UBERON:0010533	73.06	gold quality
kidney	UBERON:0002113	71.52	gold quality
mucosa of transverse colon	UBERON:0004991	71.23	gold quality
cortex of kidney	UBERON:0001225	69.74	gold quality
body of pancreas	UBERON:0001150	69.51	gold quality
pancreas	UBERON:0001264	69.10	gold quality
duodenum	UBERON:0002114	68.65	gold quality
islet of Langerhans	UBERON:0000006	67.85	gold quality
rectum	UBERON:0001052	64.91	gold quality
transverse colon	UBERON:0001157	64.79	gold quality
colon	UBERON:0001155	61.63	gold quality
gall bladder	UBERON:0002110	61.15	gold quality
right uterine tube	UBERON:0001302	61.05	gold quality
intestine	UBERON:0000160	60.94	gold quality
pituitary gland	UBERON:0000007	60.28	gold quality
small intestine	UBERON:0002108	59.84	gold quality
endometrium	UBERON:0001295	59.02	gold quality
small intestine Peyer’s patch	UBERON:0003454	59.01	gold quality
fundus of stomach	UBERON:0001160	58.77	gold quality
adenohypophysis	UBERON:0002196	58.64	gold quality
body of stomach	UBERON:0001161	58.51	gold quality
fallopian tube	UBERON:0003889	58.12	gold quality
stomach	UBERON:0000945	57.88	gold quality
lung	UBERON:0002048	57.49	gold quality
upper lobe of left lung	UBERON:0008952	56.98	gold quality
skeletal muscle tissue	UBERON:0001134	56.73	gold quality
prefrontal cortex	UBERON:0000451	56.55	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.