RPH3AL-AS3

Summary

RPH3AL-AS3 (RPH3AL antisense RNA 3, HGNC:58550) is a long non-coding RNA gene on chromosome 17p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58550
Approved symbol	RPH3AL-AS3
Name	RPH3AL antisense RNA 3
Location	17p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000262920
Ensembl biotype	lncRNA
Entrez	142592838

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000570501, ENST00000572998, ENST00000793225, ENST00000793226

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000570501 — 2 exons

Exon	Start	End
ENSE00002683348	322262	322453
ENSE00004175886	321308	321610

Expression profiles

Bgee: expression breadth ubiquitous, 117 present calls, max score 81.95.

Top tissues by expression

117 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
pituitary gland	UBERON:0000007	81.95	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.37	gold quality
adenohypophysis	UBERON:0002196	78.52	gold quality
body of pancreas	UBERON:0001150	76.18	gold quality
pancreas	UBERON:0001264	73.84	gold quality
liver	UBERON:0002107	70.31	gold quality
cortex of kidney	UBERON:0001225	69.99	gold quality
adult mammalian kidney	UBERON:0000082	69.79	gold quality
gall bladder	UBERON:0002110	69.74	gold quality
right lobe of liver	UBERON:0001114	69.50	gold quality
kidney	UBERON:0002113	69.44	gold quality
metanephros cortex	UBERON:0010533	69.17	gold quality
right adrenal gland	UBERON:0001233	65.11	gold quality
skeletal muscle tissue	UBERON:0001134	64.38	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	64.15	gold quality
islet of Langerhans	UBERON:0000006	63.84	gold quality
hindlimb stylopod muscle	UBERON:0004252	63.48	gold quality
bone marrow	UBERON:0002371	63.40	gold quality
lymph node	UBERON:0000029	63.31	gold quality
vermiform appendix	UBERON:0001154	63.29	gold quality
colonic epithelium	UBERON:0000397	63.06	silver quality
left adrenal gland cortex	UBERON:0035825	62.98	gold quality
right adrenal gland cortex	UBERON:0035827	62.89	gold quality
stromal cell of endometrium	CL:0002255	62.49	gold quality
fundus of stomach	UBERON:0001160	62.39	gold quality
adrenal gland	UBERON:0002369	62.39	gold quality
upper lobe of left lung	UBERON:0008952	62.33	gold quality
urinary bladder	UBERON:0001255	62.14	gold quality
muscle of leg	UBERON:0001383	61.81	gold quality
gastrocnemius	UBERON:0001388	61.77	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.