RRAGAP1-AS1

Summary

RRAGAP1-AS1 (RRAGAP1 antisense RNA 1, HGNC:55445) is a long non-coding RNA gene on chromosome 14q21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55445
Approved symbol	RRAGAP1-AS1
Name	RRAGAP1 antisense RNA 1
Location	14q21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258633
Ensembl biotype	lncRNA
Entrez	120766148
RNAcentral	URS0002A1F27D — lncRNA, 1854 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 28 — 28 lncRNA

ENST00000554389, ENST00000555157, ENST00000665816, ENST00000715832, ENST00000715833, ENST00000715834, ENST00000715835, ENST00000715836, ENST00000715837, ENST00000715838, ENST00000715839, ENST00000780005, ENST00000780006, ENST00000780007, ENST00000780008, ENST00000780009, ENST00000780010, ENST00000780011, ENST00000780012, ENST00000780013, ENST00000780014, ENST00000780015, ENST00000780016, ENST00000780017, ENST00000780018, ENST00000780019, ENST00000780020, ENST00000780021

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000554389 — 2 exons

Exon	Start	End
ENSE00004150909	44897012	44897077
ENSE00004150915	44876852	44877500

Expression profiles

Bgee: expression breadth ubiquitous, 104 present calls, max score 93.68.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1271 / max 19.9450, expressed in 46 samples.

FANTOM5 promoters (5 alternative TSS)

Promoter ID	TPM avg	Samples expressed
143030	0.0772	31
143029	0.0285	12
143033	0.0099	6
143032	0.0081	3
143031	0.0034	0

Top tissues by expression

104 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	93.68	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.75	gold quality
islet of Langerhans	UBERON:0000006	54.72	gold quality
lymph node	UBERON:0000029	54.43	gold quality
vermiform appendix	UBERON:0001154	52.68	gold quality
monocyte	CL:0000576	52.26	silver quality
duodenum	UBERON:0002114	52.26	gold quality
liver	UBERON:0002107	51.27	gold quality
gall bladder	UBERON:0002110	51.27	gold quality
prefrontal cortex	UBERON:0000451	50.89	gold quality
right testis	UBERON:0004534	50.79	gold quality
endometrium	UBERON:0001295	50.62	silver quality
corpus callosum	UBERON:0002336	50.30	silver quality
blood	UBERON:0000178	50.24	silver quality
testis	UBERON:0000473	49.36	gold quality
left testis	UBERON:0004533	49.09	gold quality
cortex of kidney	UBERON:0001225	48.86	gold quality
smooth muscle tissue	UBERON:0001135	48.23	gold quality
tibial artery	UBERON:0007610	48.07	gold quality
popliteal artery	UBERON:0002250	48.06	gold quality
right coronary artery	UBERON:0001625	48.00	gold quality
heart left ventricle	UBERON:0002084	47.90	gold quality
superior frontal gyrus	UBERON:0002661	47.34	silver quality
muscle of leg	UBERON:0001383	47.10	gold quality
heart	UBERON:0000948	47.06	gold quality
left coronary artery	UBERON:0001626	46.32	gold quality
right adrenal gland cortex	UBERON:0035827	46.21	gold quality
placenta	UBERON:0001987	46.18	gold quality
lower esophagus	UBERON:0013473	46.12	gold quality
lower esophagus muscularis layer	UBERON:0035833	46.10	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.