RRM1
geneOn this page
Summary
RRM1 (ribonucleotide reductase catalytic subunit M1, HGNC:10451) is a protein-coding gene on chromosome 11p15.4, encoding Ribonucleoside-diphosphate reductase large subunit (P23921). Provides the precursors necessary for DNA synthesis. In precision oncology, RRM1 Underexpression confers sensitivity to Gemcitabine + Cisplatin in Lung Non-small Cell Carcinoma (CIViC Level B); 8 further curated variant–drug associations are listed below. It is a common-essential gene (DepMap: required in 100.0% of cancer cell lines).
This gene encodes the large and catalytic subunit of ribonucleotide reductase, an enzyme essential for the conversion of ribonucleotides into deoxyribonucleotides. A pool of available deoxyribonucleotides is important for DNA replication during S phase of the cell cycle as well as multiple DNA repair processes. Alternative splicing results in multiple transcript variants.
Source: NCBI Gene 6240 — RefSeq curated summary.
At a glance
- Gene–disease (curated): progressive external ophthalmoplegia with mitochondrial dna deletions, autosomal recessive 6 (Moderate, GenCC) — +1 more curated relationship
- GWAS associations: 12
- Clinical variants (ClinVar): 84 total — 1 pathogenic, 1 likely-pathogenic
- Phenotypes (HPO): 67
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- Precision-oncology evidence (CIViC): 9 curated variant–drug associations
- Cancer dependency (DepMap): dependent in 100.0% of screened cell lines (common-essential)
- MANE Select transcript:
NM_001033
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:10451 |
| Approved symbol | RRM1 |
| Name | ribonucleotide reductase catalytic subunit M1 |
| Location | 11p15.4 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000167325 |
| Ensembl biotype | protein_coding |
| OMIM | 180410 |
| Entrez | 6240 |
Gene structure
Transcript identifiers
Ensembl transcripts: 16 — 4 protein_coding, 4 protein_coding_CDS_not_defined, 4 retained_intron, 4 nonsense_mediated_decay
ENST00000300738, ENST00000526304, ENST00000526350, ENST00000526865, ENST00000528442, ENST00000528470, ENST00000529109, ENST00000530368, ENST00000531591, ENST00000532170, ENST00000532710, ENST00000533349, ENST00000533495, ENST00000534285, ENST00000854928, ENST00000854929
RefSeq mRNA: 4 — MANE Select: NM_001033
NM_001033, NM_001318064, NM_001318065, NM_001330193
CCDS: CCDS7750, CCDS81547
Canonical transcript exons
ENST00000300738 — 19 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001838070 | 4138195 | 4138932 |
| ENSE00002153098 | 4094799 | 4095031 |
| ENSE00003493610 | 4107435 | 4107535 |
| ENSE00003539380 | 4111601 | 4111640 |
| ENSE00003560199 | 4106046 | 4106223 |
| ENSE00003560908 | 4109644 | 4109703 |
| ENSE00003561495 | 4133563 | 4133658 |
| ENSE00003580075 | 4119845 | 4119928 |
| ENSE00003589547 | 4101993 | 4102081 |
| ENSE00003594495 | 4129074 | 4129150 |
| ENSE00003596042 | 4135082 | 4135270 |
| ENSE00003617237 | 4111900 | 4112062 |
| ENSE00003633973 | 4123183 | 4123384 |
| ENSE00003637542 | 4122141 | 4122220 |
| ENSE00003639050 | 4121604 | 4121765 |
| ENSE00003639634 | 4127035 | 4127256 |
| ENSE00003663342 | 4118320 | 4118461 |
| ENSE00003666985 | 4132286 | 4132421 |
| ENSE00003686240 | 4126684 | 4126833 |
Expression profiles
Bgee: expression breadth ubiquitous, 296 present calls, max score 98.29.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 64.2022 / max 1044.0370, expressed in 1813 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 112764 | 43.6391 | 1798 |
| 112763 | 19.1788 | 1779 |
| 112762 | 0.8833 | 551 |
| 112767 | 0.5011 | 265 |
Top tissues by expression
299 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| ventricular zone | UBERON:0003053 | 98.29 | gold quality |
| ganglionic eminence | UBERON:0004023 | 97.89 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 97.42 | gold quality |
| embryo | UBERON:0000922 | 97.04 | gold quality |
| penis | UBERON:0000989 | 96.95 | gold quality |
| nipple | UBERON:0002030 | 96.73 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 96.48 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 96.40 | gold quality |
| skin of hip | UBERON:0001554 | 96.34 | gold quality |
| upper leg skin | UBERON:0004262 | 96.09 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 95.97 | gold quality |
| mammalian vulva | UBERON:0000997 | 95.85 | gold quality |
| calcaneal tendon | UBERON:0003701 | 95.62 | gold quality |
| hair follicle | UBERON:0002073 | 95.32 | gold quality |
| gingival epithelium | UBERON:0001949 | 95.19 | gold quality |
| tendon | UBERON:0000043 | 95.07 | gold quality |
| gingiva | UBERON:0001828 | 95.06 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 94.87 | gold quality |
| nasopharynx | UBERON:0001728 | 94.85 | gold quality |
| stromal cell of endometrium | CL:0002255 | 94.71 | gold quality |
| superior surface of tongue | UBERON:0007371 | 94.34 | gold quality |
| oral cavity | UBERON:0000167 | 94.33 | gold quality |
| squamous epithelium | UBERON:0006914 | 94.31 | gold quality |
| bone marrow | UBERON:0002371 | 94.21 | gold quality |
| pylorus | UBERON:0001166 | 93.84 | gold quality |
| cervix epithelium | UBERON:0004801 | 93.76 | gold quality |
| amniotic fluid | UBERON:0000173 | 93.61 | gold quality |
| tongue | UBERON:0001723 | 93.55 | gold quality |
| adrenal tissue | UBERON:0018303 | 93.42 | gold quality |
| secondary oocyte | CL:0000655 | 93.32 | gold quality |
Single-cell (SCXA)
Detected in 13 experiment(s), a significant marker in 7.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-6075 | yes | 320.44 |
| E-HCAD-10 | yes | 34.87 |
| E-CURD-122 | yes | 22.38 |
| E-ANND-3 | yes | 8.49 |
| E-MTAB-6678 | yes | 7.72 |
| E-MTAB-10553 | yes | 7.01 |
| E-MTAB-9801 | yes | 3.56 |
| E-GEOD-99795 | no | 577.83 |
| E-CURD-10 | no | 401.75 |
| E-MTAB-6058 | no | 381.82 |
| E-GEOD-76312 | no | 287.43 |
| E-MTAB-7037 | no | 212.73 |
| E-CURD-88 | no | 3.64 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): E2F1, E2F4, HR, KAT5, SP1, TFDP1, THAP1, TP53
miRNA regulators (miRDB)
21 targeting RRM1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
| HSA-MIR-101-3P | 99.94 | 75.03 | 2230 |
| HSA-MIR-1236-3P | 99.94 | 68.04 | 1695 |
| HSA-MIR-205-3P | 99.92 | 69.92 | 3165 |
| HSA-MIR-5680 | 99.91 | 69.83 | 3421 |
| HSA-MIR-4422 | 99.72 | 72.07 | 2908 |
| HSA-MIR-33A-3P | 99.70 | 70.27 | 3362 |
| HSA-MIR-4328 | 99.57 | 71.06 | 4094 |
| HSA-MIR-3942-3P | 99.57 | 69.03 | 2854 |
| HSA-MIR-216A-5P | 99.50 | 68.02 | 1288 |
| HSA-MIR-513C-5P | 99.50 | 68.42 | 1730 |
| HSA-MIR-514B-5P | 99.50 | 68.19 | 1766 |
| HSA-MIR-488-5P | 99.28 | 68.12 | 821 |
| HSA-MIR-4705 | 99.10 | 69.10 | 1091 |
| HSA-MIR-605-5P | 98.79 | 68.24 | 1161 |
| HSA-MIR-338-3P | 98.14 | 67.38 | 1137 |
| HSA-MIR-10526-3P | 97.86 | 64.97 | 1342 |
| HSA-MIR-4733-5P | 97.75 | 67.44 | 866 |
| HSA-MIR-6894-3P | 96.73 | 65.64 | 798 |
| HSA-MIR-6782-5P | 96.45 | 64.42 | 612 |
| HSA-MIR-3619-3P | 95.59 | 65.99 | 428 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 100.0% of screened cell lines, common-essential.
Literature-anchored findings (GeneRIF, showing 40)
- overexpression of RRM1 in human and mouse lung cancer cell lines induced PTEN expression, reduced phosphorylation of focal adhesion kinase (FAK), suppressed migration, invasion, and metastasis formation, and increased survival in an animal model. (PMID:12687015)
- RRM1 levels influenced time to progression (P=0.05) and even more so, survival (P=0.0028) in the gemcitabine/cisplatin arm (PMID:12789263)
- Susceptibility differences to RR inhibitors between hRRM1 and hRRM2 may lead to a new direction in drug design for human cancer treatment. (PMID:14729598)
- The level of RRM1 may affect gemcitabine response in non-small cell lung cancer. Furthermore, RRM1 may serve as a biomarker for gemcitabine response. (PMID:15172981)
- the binding site on RRM1 demonstrated higher affinity for RRM2 subunit than for p53R2 subunit (PMID:16376858)
- overexpressed during the S phase of the cell cycle compared with the G0/1 phase (PMID:16476973)
- Motexafin gadolinium induces enzymatic generation of reactive oxygen species by thioredoxin reductase and inhibits ribonucleotide reductase (PMID:16481328)
- results strongly suggest that tumoral RRM1 expression is a major predictor of disease response to gemcitabine/platinum chemotherapy (PMID:16966686)
- RRM1 could play a role in the prediction of patient outcome, and draw attention to the fact that response to gemcitabine. (PMID:17064812)
- RRM1 RNA expression has a role in acquired resistance to gemcitabine (PMID:17065054)
- RRM1 should be a key molecule in gemcitabine resistance in human pancreatic cancer. (PMID:17131328)
- RRM1 haplotype showed an association with susceptibility to gemcitabine monotherapy in breast cancer patients. (PMID:17602053)
- Ribonucleotide reductase subunit M1(RRM1) mRNA expression in lung adenocarcinoma is associated with clinical outcome of docetaxel/gemcitabine therapy. (PMID:18414411)
- significant differences in response rates to gemcitabine-based chemotherapy according to the allelotypes of the RRM1 promoter sequence (PMID:18483375)
- Significantly higher RRM1 mRNA expression was found in SCLC compared with NSCLC. There was no correlation between mRNA expression of the RRM1 gene and chemosensitivity to cisplatin, carboplatin or gemcitabine. (PMID:18494946)
- Expression of RRM1 is associated with chemoresistance marker to gemcitabine in biliary tract carcinoma (PMID:18636187)
- The mRNA expression of RRM1 is potentially a useful tool for selecting NSCLC patients for individualized chemotherapy (PMID:19002265)
- genetic polymorphisms is associated with sensitivity to platin-based chemotherapy in non-small cell lung cancer patients (PMID:19304340)
- Data show that the combination of RRM1 and ERCC1 expression is prognostic in pancreatic cancer patients after a complete resection. (PMID:19543324)
- patients with advanced NSCLC treated with chemotherapy with gemcitabine and cisplatin appear to have a poor outcome if the tumor express elevated levels of RRM1 gene but surgical resection shows better survival. (PMID:19552012)
- Esophageal squamous cell carcinoma cells with a lower level of RRM1 expression are more sensitive to gemcitabine. (PMID:20021860)
- RRM1 suppression is an important step in increasing Gemcitabine efficacy (PMID:20043067)
- Tip60-dependent recruitment of RNR plays an essential role in dNTP supply for DNA repair (PMID:20159953)
- Compared with their parental cells, the expressions of CDA, RRM1, PTEN and ERCC1 increase in human gemcitabine-resistant non-small cell lung cancer cell lines. (PMID:20211060)
- RRM1 single nucleotide polymorphism is not associated with non-small cell lung cancer patients after gemcitabine-based chemotherapy. (PMID:20226083)
- ERCC1, RRM1 and BRCA1 are promising predictive and prognostic biomarkers in advanced non-small cell lung cancer. (PMID:20467918)
- RRM1, particularly in protein, level is a reliable marker for gemcitabine resistance in biliary tract carcinoma. (PMID:20811706)
- In postoperative NSCLC patients who are receiving adjuvant chemotherapy, patients with high expression of RRM1 tend to be resistant to gemcitabine. (PMID:20868593)
- RRM1 -37A>C polymorphism may represent a useful biomarker to select mCRC patients most likely to benefit from gemcitabine-based salvage therapy. (PMID:21220199)
- M1 (RRM1) expression in resected pancreatic cancer is not associated with OS or Pfs. (PMID:21264835)
- The study reports the first X-ray structures of human RR1 bound to TTP alone, dATP alone, TTP-GDP, TTP-ATP, and TTP-dATP. (PMID:21336276)
- RRM1 has a role in response to gemcitabine plus platinum therapy in advanced non-small-cell lung cancer (PMID:21370501)
- Cases with EGFR overexpression showed high expression of RRM1 and BRCA1 (PMID:21394302)
- The RRM1 2464 A/G, RRM1 37 C/C and RRM1 524 T/T alleles were associated with statistically significant superior progression free survival in pancreatic cancer patients receiving combination gemcitabine and sorafenib (PMID:21424698)
- Data suggest ribonucleotide reductase A site binding with inhibitor. (PMID:21628579)
- Single-nucleotide polymorphisms in RRM1 gene is associated with treatment response in non-small cell lung cancer. (PMID:21642870)
- RRM1 polymorphisms as well as haplotypes showed an association with gemcitabine treatment efficacy and toxicity. (PMID:22134350)
- RRM1 levels in pancreatic ductal adenocarcinoma did not predict survival times in patients treated with adjuvant gemcitabine. (PMID:22705007)
- The expression of RRMI and ERCC1 genes in tumor tissues and RRM1 in peripheral blood lymphocytes is closely correlated with the response to chemotherapy and prognosis of patients with advanced non-small cell lung cancer. (PMID:23086647)
- We assessed the relation of mRNA levels of ERCC1, RRM1, and BRCA1 to survival in surgically-resected tumor tissues from patients who underwent adjuvant chemotherapy (PMID:23155271)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | rrm1 | ENSDARG00000014017 |
| mus_musculus | Rrm1 | ENSMUSG00000030978 |
| rattus_norvegicus | Rrm1 | ENSRNOG00000045752 |
| drosophila_melanogaster | RnrL | FBGN0011703 |
| caenorhabditis_elegans | WBGENE00004391 |
Protein
Protein identifiers
Ribonucleoside-diphosphate reductase large subunit — P23921 (reviewed: P23921)
Alternative names: Ribonucleoside-diphosphate reductase subunit M1, Ribonucleotide reductase large subunit
All UniProt accessions (6): P23921, E9PJ62, E9PL69, E9PP77, E9PRY9, H0YCY7
UniProt curated annotations — full annotation on UniProt →
Function. Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
Subunit / interactions. Heterodimer of a large and a small subunit. Heterodimer with small subunit RRM2 or RRM2B. The heterodimer with RRM2 has higher catalytic activity than the heterodimer with RRM2B. Interacts with AHCYL1 which inhibits its activity.
Subcellular location. Cytoplasm.
Disease relevance. Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 6 (PEOB6) [MIM:620647] A form of progressive external ophthalmoplegia, a mitochondrial myopathy characterized by progressive paralysis of the levator palpebrae, orbicularis oculi, and extraocular muscles. Ragged red fibers are seen on muscle biopsy. The disease may be caused by variants affecting the gene represented in this entry.
Activity regulation. Under complex allosteric control mediated by deoxynucleoside triphosphates and ATP binding to separate specificity and activation sites on the M1 subunit. The type of nucleotide bound at the specificity site determines substrate preference. It seems probable that ATP makes the enzyme reduce CDP and UDP, dGTP favors ADP reduction and dTTP favors GDP reduction. Stimulated by ATP and inhibited by dATP binding to the activity site, the dATP inhibition is mediated by AHCYL1 which stabilizes dATP in the site.
Miscellaneous. Two distinct regulatory sites have been defined: the specificity site, which controls substrate specificity, and the activity site which regulates overall catalytic activity. A substrate-binding catalytic site, located on M1, is formed only in the presence of the second subunit M2. The level of the enzyme activity is closely correlated with the growth rate of a cell and appears to vary with the cell cycle.
Similarity. Belongs to the ribonucleoside diphosphate reductase large chain family.
RefSeq proteins (4): NP_001024, NP_001304993, NP_001304994, NP_001317122 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000788 | RNR_lg_C | Domain |
| IPR005144 | ATP-cone_dom | Domain |
| IPR008926 | RNR_R1-su_N | Homologous_superfamily |
| IPR013346 | NrdE_NrdA_C | Domain |
| IPR013509 | RNR_lsu_N | Domain |
| IPR039718 | Rrm1 | Family |
Pfam: PF00317, PF02867, PF03477
Enzyme classification (BRENDA):
- EC 1.17.4.1 — ribonucleoside-diphosphate reductase (BRENDA: 56 organisms, 130 substrates, 474 inhibitors, 39 Km, 9 kcat entries)
Substrate kinetics (BRENDA)
10 substrates with measured Km, best-characterized 10. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| CDP | 0.0005–0.31 | 14 |
| ADP | 0.0078–0.3 | 6 |
| GDP | 0.0012–0.37 | 4 |
| UDP | 0.08–1.2 | 4 |
| ATP | 0.07 | 1 |
| DATP | 0.003 | 1 |
| DTTP | 0.0015 | 1 |
| GLUTAREDOXIN | 0.0001 | 1 |
| GLUTAREDOXIN 1 | 0.006 | 1 |
| THIOREDOXIN | 0.003 | 1 |
Catalyzed reactions (Rhea), 1 shown:
- a 2’-deoxyribonucleoside 5’-diphosphate + [thioredoxin]-disulfide + H2O = a ribonucleoside 5’-diphosphate + [thioredoxin]-dithiol (RHEA:23252)
UniProt features (114 total): helix 41, strand 31, binding site 13, turn 7, site 6, sequence variant 5, active site 3, modified residue 3, chain 1, domain 1, disulfide bond 1, mutagenesis site 1, sequence conflict 1
Structure
Experimental structures (PDB)
12 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6L3R | X-RAY DIFFRACTION | 2 |
| 6L7L | X-RAY DIFFRACTION | 2.17 |
| 2WGH | X-RAY DIFFRACTION | 2.3 |
| 3HNC | X-RAY DIFFRACTION | 2.41 |
| 6LKM | X-RAY DIFFRACTION | 2.55 |
| 5TUS | X-RAY DIFFRACTION | 2.66 |
| 3HNE | X-RAY DIFFRACTION | 3.11 |
| 3HNF | X-RAY DIFFRACTION | 3.16 |
| 3HND | X-RAY DIFFRACTION | 3.21 |
| 6AUI | ELECTRON MICROSCOPY | 3.3 |
| 4X3V | X-RAY DIFFRACTION | 3.7 |
| 5D1Y | X-RAY DIFFRACTION | 9.01 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P23921-F1 | 92.43 | 0.80 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (9): 218 (important for hydrogen atom transfer); 444 (important for hydrogen atom transfer); 427 (proton acceptor); 737 (important for electron transfer); 738 (important for electron transfer); 787 (interacts with thioredoxin/glutaredoxin); 790 (interacts with thioredoxin/glutaredoxin); 429 (cysteine radical intermediate); 431 (proton acceptor)
Ligand- & substrate-binding residues (13): 217; 226–228; 243; 256; 263–264; 427; 431; 604–607; 5–6; 11–17; 53; 57 …
Post-translational modifications (3): 17, 376, 751
Disulfide bonds (1): 218–444
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 57 | severely decreases interaction with ahcyl1 in the presence of datp. |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-499943 | Interconversion of nucleotide di- and triphosphates |
MSigDB gene sets: 0 (showing top):
GO Biological Process (15): DNA synthesis involved in DNA repair (GO:0000731), pyrimidine nucleobase metabolic process (GO:0006206), mitochondrial DNA replication (GO:0006264), DNA repair (GO:0006281), male gonad development (GO:0008584), ribonucleoside diphosphate metabolic process (GO:0009185), deoxyribonucleotide biosynthetic process (GO:0009263), 2’-deoxyribonucleotide biosynthetic process (GO:0009265), response to ionizing radiation (GO:0010212), positive regulation of G2/M transition of mitotic cell cycle (GO:0010971), cell proliferation in forebrain (GO:0021846), protein heterotetramerization (GO:0051290), retina development in camera-type eye (GO:0060041), positive regulation of G0 to G1 transition (GO:0070318), positive regulation of G1/S transition of mitotic cell cycle (GO:1900087)
GO Molecular Function (10): ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (GO:0004748), ATP binding (GO:0005524), identical protein binding (GO:0042802), ribonucleoside-diphosphate reductase activity (GO:0061731), disordered domain specific binding (GO:0097718), nucleotide binding (GO:0000166), catalytic activity (GO:0003824), protein binding (GO:0005515), oxidoreductase activity (GO:0016491), purine nucleotide binding (GO:0017076)
GO Cellular Component (10): nuclear envelope (GO:0005635), mitochondrion (GO:0005739), cytosol (GO:0005829), ribonucleoside-diphosphate reductase complex (GO:0005971), centriolar satellite (GO:0034451), ciliary basal body (GO:0036064), neuronal cell body (GO:0043025), cytoplasm (GO:0005737), membrane (GO:0016020), cell projection (GO:0042995)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Metabolism of nucleotides | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| positive regulation of mitotic cell cycle phase transition | 2 |
| cytoplasm | 2 |
| DNA repair | 1 |
| DNA biosynthetic process | 1 |
| nucleobase metabolic process | 1 |
| pyrimidine-containing compound metabolic process | 1 |
| mitochondrion | 1 |
| DNA-templated DNA replication | 1 |
| mitochondrial DNA metabolic process | 1 |
| DNA metabolic process | 1 |
| DNA damage response | 1 |
| gonad development | 1 |
| development of primary male sexual characteristics | 1 |
| nucleoside diphosphate metabolic process | 1 |
| biosynthetic process | 1 |
| deoxyribonucleotide metabolic process | 1 |
| nucleotide biosynthetic process | 1 |
| 2’-deoxyribonucleotide metabolic process | 1 |
| deoxyribose phosphate biosynthetic process | 1 |
| response to radiation | 1 |
| G2/M transition of mitotic cell cycle | 1 |
| regulation of G2/M transition of mitotic cell cycle | 1 |
| positive regulation of cell cycle G2/M phase transition | 1 |
| forebrain development | 1 |
| neural precursor cell proliferation | 1 |
| protein tetramerization | 1 |
| protein heterooligomerization | 1 |
| camera-type eye development | 1 |
| anatomical structure development | 1 |
| G0 to G1 transition | 1 |
| regulation of G0 to G1 transition | 1 |
| positive regulation of cell cycle process | 1 |
| G1/S transition of mitotic cell cycle | 1 |
| positive regulation of cell cycle G1/S phase transition | 1 |
| regulation of G1/S transition of mitotic cell cycle | 1 |
| ribonucleoside-diphosphate reductase activity | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| protein binding | 1 |
Protein interactions and networks
STRING
4721 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| RRM1 | RRM2 | P31350 | 999 |
| RRM1 | RRM2B | Q7LG56 | 996 |
| RRM1 | ESRP1 | Q6NXG1 | 831 |
| RRM1 | TARDBP | Q13148 | 821 |
| RRM1 | ESRP2 | Q9H6T0 | 820 |
| RRM1 | EIF4G1 | Q04637 | 802 |
| RRM1 | ERCC1 | P07992 | 773 |
| RRM1 | TYMS | P04818 | 773 |
| RRM1 | TOP2A | P11388 | 771 |
| RRM1 | CELF6 | Q96J87 | 763 |
| RRM1 | DCK | P27707 | 753 |
| RRM1 | THAP1 | Q9NVV9 | 745 |
| RRM1 | HNRNPDL | O14979 | 735 |
| RRM1 | PABPC1 | P11940 | 729 |
| RRM1 | CELF3 | Q5SZQ8 | 719 |
IntAct
76 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| HRAS | RAF1 | psi-mi:“MI:0914”(association) | 0.980 |
| RRM1 | RRM2 | psi-mi:“MI:0407”(direct interaction) | 0.850 |
| RRM2 | RRM1 | psi-mi:“MI:0914”(association) | 0.850 |
| RRM2 | RRM1 | psi-mi:“MI:0915”(physical association) | 0.850 |
| TRIM33 | TRIM24 | psi-mi:“MI:0914”(association) | 0.790 |
| RRM1 | RRM1 | psi-mi:“MI:0915”(physical association) | 0.780 |
| RRM1 | RRM1 | psi-mi:“MI:0407”(direct interaction) | 0.780 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| PFDN2 | POLR3A | psi-mi:“MI:0914”(association) | 0.670 |
| RRM1 | ZNF655 | psi-mi:“MI:0915”(physical association) | 0.560 |
| RRM1 | GLRX3 | psi-mi:“MI:0914”(association) | 0.530 |
| KAT5 | YEATS4 | psi-mi:“MI:0914”(association) | 0.530 |
| GPR37 | ATE1 | psi-mi:“MI:0914”(association) | 0.530 |
| PPP1CC | RRM1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| OTUB1 | psi-mi:“MI:0914”(association) | 0.350 | |
| OTUB1 | EPM2A | psi-mi:“MI:0914”(association) | 0.350 |
| Cdca8 | NAP1L1 | psi-mi:“MI:0914”(association) | 0.350 |
| Ubr5 | SFI1 | psi-mi:“MI:0914”(association) | 0.350 |
| RNASEH2B | SAP18 | psi-mi:“MI:0914”(association) | 0.350 |
| Cdkn2aip | SF1 | psi-mi:“MI:0914”(association) | 0.350 |
| HSCB | RBP5 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (188): RRM1 (Two-hybrid), RRM1 (Affinity Capture-MS), RRM2 (Co-fractionation), RRM1 (Affinity Capture-MS), RRM1 (Synthetic Growth Defect), RRM1 (Proximity Label-MS), RRM1 (Proximity Label-MS), RRM1 (Affinity Capture-MS), RRM1 (Affinity Capture-MS), RRM1 (Affinity Capture-MS), RRM1 (Affinity Capture-MS), RRM1 (Affinity Capture-MS), RRM1 (Affinity Capture-MS), RRM1 (Affinity Capture-MS), RRM1 (Affinity Capture-MS)
ESM2 similar proteins: A0A7H0DN52, A6Q367, O15909, O55716, O61065, O83972, P07071, P07742, P0A5W9, P0C8H8, P0C8H9, P0CG99, P0CH00, P0DSV1, P0DSV2, P12848, P20503, P21524, P21672, P23921, P26685, P32282, P36602, P42491, P43752, P43754, P48591, P50620, P50647, P50648, P55982, P57276, P74240, P79732, P9WH75, Q03604, Q196Z5, Q54Q71, Q5R919, Q6GZT8
Diamond homologs: A0A7H0DN52, E7FHX6, O15909, O55716, O61065, O66503, O83972, O84834, P07742, P08543, P09853, P0C8H7, P0C8H8, P0C8H9, P0DSV1, P0DSV2, P12848, P20503, P21524, P21672, P23921, P26685, P28846, P36602, P42491, P48591, P50642, P50643, P50647, P50648, P55982, P79732, P89462, Q03604, Q54Q71, Q5R919, Q6R7H4, Q6UDJ2, Q76RD8, Q77MS1
SIGNOR signaling
9 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| E2F1 | “up-regulates quantity by expression” | RRM1 | “transcriptional regulation” |
| TFDP1 | “up-regulates quantity by expression” | RRM1 | “transcriptional regulation” |
| clofarabine | “down-regulates activity” | RRM1 | “chemical inhibition” |
| RRM1 | “form complex” | “Ribonucleotide reductase” | binding |
| RRM2B | “up-regulates activity” | RRM1 | binding |
| CyclinA2/CDK2 | “up-regulates activity” | RRM1 | phosphorylation |
| mTORC2 | “up-regulates activity” | RRM1 | phosphorylation |
| gemcitabine | “down-regulates activity” | RRM1 | “chemical inhibition” |
| (2R,3S,4S,5R)-2-(6-amino-2-fluoro-9-purinyl)-5-(hydroxymethyl)oxolane-3,4-diol | “down-regulates activity” | RRM1 | “chemical inhibition” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 82 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| double-strand break repair | 5 | 13.7× | 6e-03 |
| MAPK cascade | 6 | 12.4× | 6e-03 |
| DNA damage response | 8 | 5.8× | 7e-03 |
Disease & clinical
Cancer significance
Clinical variants and AI predictions
ClinVar
84 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 1 |
| Uncertain significance | 58 |
| Likely benign | 1 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (2)
| Variant ID | HGVS | Classification |
|---|---|---|
| 2664486 | NM_001033.5(RRM1):c.1141C>T (p.Arg381Cys) | Pathogenic |
| 2444243 | NM_001033.5(RRM1):c.1142G>A (p.Arg381His) | Likely pathogenic |
SpliceAI
2685 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:4096082:GTGGT:G | donor_gain | 1.0000 |
| 11:4101988:TTTA:T | acceptor_loss | 1.0000 |
| 11:4101989:TTAG:T | acceptor_loss | 1.0000 |
| 11:4101990:TA:T | acceptor_loss | 1.0000 |
| 11:4101991:A:AG | acceptor_gain | 1.0000 |
| 11:4101991:AGA:A | acceptor_loss | 1.0000 |
| 11:4101991:AGAT:A | acceptor_gain | 1.0000 |
| 11:4101992:G:GG | acceptor_gain | 1.0000 |
| 11:4101992:GA:G | acceptor_gain | 1.0000 |
| 11:4101992:GAT:G | acceptor_gain | 1.0000 |
| 11:4101992:GATG:G | acceptor_gain | 1.0000 |
| 11:4102077:ATCCT:A | donor_gain | 1.0000 |
| 11:4102078:TCCT:T | donor_gain | 1.0000 |
| 11:4102079:CCT:C | donor_gain | 1.0000 |
| 11:4102080:CT:C | donor_gain | 1.0000 |
| 11:4102081:TGTA:T | donor_loss | 1.0000 |
| 11:4102082:GTAA:G | donor_gain | 1.0000 |
| 11:4102083:T:G | donor_loss | 1.0000 |
| 11:4102086:G:GG | donor_gain | 1.0000 |
| 11:4106041:T:TA | acceptor_gain | 1.0000 |
| 11:4106044:A:AG | acceptor_gain | 1.0000 |
| 11:4106044:AG:A | acceptor_gain | 1.0000 |
| 11:4106045:G:GA | acceptor_gain | 1.0000 |
| 11:4106045:GG:G | acceptor_gain | 1.0000 |
| 11:4106045:GGC:G | acceptor_gain | 1.0000 |
| 11:4106045:GGCT:G | acceptor_gain | 1.0000 |
| 11:4106045:GGCTC:G | acceptor_gain | 1.0000 |
| 11:4106211:A:T | donor_gain | 1.0000 |
| 11:4106221:GTG:G | donor_gain | 1.0000 |
| 11:4106222:TG:T | donor_gain | 1.0000 |
AlphaMissense
5257 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:4118324:T:C | F219L | 1.000 |
| 11:4118326:T:A | F219L | 1.000 |
| 11:4118326:T:G | F219L | 1.000 |
| 11:4119900:C:A | A283D | 1.000 |
| 11:4121610:G:T | G295W | 1.000 |
| 11:4121611:G:A | G295E | 1.000 |
| 11:4122144:T:A | W348R | 1.000 |
| 11:4122144:T:C | W348R | 1.000 |
| 11:4123345:C:A | N427K | 1.000 |
| 11:4123345:C:G | N427K | 1.000 |
| 11:4132330:C:A | A605D | 1.000 |
| 11:4102035:G:C | R21P | 0.999 |
| 11:4106104:T:C | L56P | 0.999 |
| 11:4106106:G:C | D57H | 0.999 |
| 11:4106107:A:T | D57V | 0.999 |
| 11:4106118:G:C | A61P | 0.999 |
| 11:4106119:C:A | A61D | 0.999 |
| 11:4106170:C:A | A78E | 0.999 |
| 11:4106176:G:C | R80T | 0.999 |
| 11:4106176:G:T | R80M | 0.999 |
| 11:4106187:T:C | S84P | 0.999 |
| 11:4106201:A:C | K88N | 0.999 |
| 11:4106201:A:T | K88N | 0.999 |
| 11:4107450:T:C | L101P | 0.999 |
| 11:4109672:G:C | R139P | 0.999 |
| 11:4109674:G:C | D140H | 0.999 |
| 11:4109675:A:T | D140V | 0.999 |
| 11:4109696:G:A | G147D | 0.999 |
| 11:4111605:T:C | L151P | 0.999 |
| 11:4111611:G:C | R153P | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000039596 (11:4120662 C>T), RS1000065003 (11:4097113 C>T), RS1000149197 (11:4102435 A>T), RS1000244192 (11:4102274 T>A,C), RS1000260922 (11:4108530 G>A), RS1000292076 (11:4107607 T>G), RS1000367321 (11:4094563 G>A), RS1000466880 (11:4100817 A>T), RS1000512395 (11:4133131 G>A,C), RS1000524242 (11:4098891 G>A), RS1000559180 (11:4132056 G>C), RS1000641225 (11:4107856 T>A), RS1000698726 (11:4095779 G>T), RS1000887073 (11:4113002 A>G), RS1000952021 (11:4119252 T>C)
Disease associations
OMIM: gene MIM:180410 | disease phenotypes: MIM:620647
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| progressive external ophthalmoplegia with mitochondrial dna deletions, autosomal recessive 6 | Moderate | Autosomal recessive |
| progressive external ophthalmoplegia with mitochondrial DNA deletions | Limited | Autosomal dominant |
Mondo (2): progressive external ophthalmoplegia with mitochondrial dna deletions, autosomal recessive 6 (MONDO:0957993), progressive external ophthalmoplegia with mitochondrial DNA deletions (MONDO:0000090)
Orphanet (0):
HPO phenotypes
67 total (30 of 67 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000298 | Mask-like facies |
| HP:0000365 | Hearing impairment |
| HP:0000407 | Sensorineural hearing impairment |
| HP:0000479 | Abnormal retinal morphology |
| HP:0000505 | Visual impairment |
| HP:0000508 | Ptosis |
| HP:0000544 | External ophthalmoplegia |
| HP:0000602 | Ophthalmoplegia |
| HP:0000648 | Optic atrophy |
| HP:0000716 | Depression |
| HP:0001249 | Intellectual disability |
| HP:0001251 | Ataxia |
| HP:0001265 | Hyporeflexia |
| HP:0001272 | Cerebellar atrophy |
| HP:0001284 | Areflexia |
| HP:0001621 | Weak voice |
| HP:0001638 | Cardiomyopathy |
| HP:0002013 | Vomiting |
| HP:0002015 | Dysphagia |
| HP:0002018 | Nausea |
| HP:0002059 | Cerebral atrophy |
| HP:0002067 | Bradykinesia |
| HP:0002345 | Action tremor |
| HP:0002362 | Shuffling gait |
| HP:0002396 | Cogwheel rigidity |
| HP:0002500 | Abnormal cerebral white matter morphology |
| HP:0002505 | Loss of ambulation |
| HP:0002548 | Parkinsonism with favorable response to dopaminergic medication |
GWAS associations
12 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST004621_20 | Red cell distribution width | 3.000000e-14 |
| GCST005993_50 | Mean corpuscular hemoglobin | 5.000000e-09 |
| GCST006804_134 | Red cell distribution width | 3.000000e-10 |
| GCST010725_20 | Malaria | 4.000000e-69 |
| GCST010725_33 | Malaria | 2.000000e-67 |
| GCST010725_51 | Malaria | 1.000000e-55 |
| GCST90002390_502 | Mean corpuscular hemoglobin | 6.000000e-34 |
| GCST90002392_555 | Mean corpuscular volume | 2.000000e-39 |
| GCST90002396_452 | Mean reticulocyte volume | 2.000000e-27 |
| GCST90002397_558 | Mean spheric corpuscular volume | 2.000000e-24 |
| GCST90002397_559 | Mean spheric corpuscular volume | 1.000000e-12 |
| GCST90002404_504 | Red cell distribution width | 6.000000e-14 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0009188 | Red cell distribution width |
| EFO:0004527 | mean corpuscular hemoglobin |
| EFO:0010701 | mean reticulocyte volume |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (3): CHEMBL1830 (SINGLE PROTEIN), CHEMBL2095215 (PROTEIN COMPLEX GROUP), CHEMBL3301398 (PROTEIN COMPLEX)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 4,524 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL231616 | TRIAPINE | 3 | 4,524 |
Clinical evidence (CIViC)
Drug × variant × indication: 9 predictive associations from 11 curated evidence items; also 1 prognostic.
| Variant | Therapy | Indication | Effect | Level | CIViC |
|---|---|---|---|---|---|
| RRM1 Underexpression | Gemcitabine + Cisplatin | Lung Non-small Cell Carcinoma | Sensitivity/Response | CIViC B | EID2905 +1 |
| RRM1 Underexpression | Gemcitabine | Pancreatic Cancer | Sensitivity/Response | CIViC B | EID5506 +1 |
| RRM1 Underexpression | Carboplatin + Gemcitabine | Lung Non-small Cell Carcinoma | Sensitivity/Response | CIViC B | EID10143 |
| RRM1 Underexpression | Paclitaxel + Gemcitabine + Cisplatin | Lung Non-small Cell Carcinoma | Sensitivity/Response | CIViC B | EID12044 |
| RRM1 Underexpression | Gemcitabine | Lung Non-small Cell Carcinoma | Sensitivity/Response | CIViC B | EID5530 |
| RRM1 Underexpression | Paclitaxel + Vinorelbine + Gemcitabine | Lung Non-small Cell Carcinoma | Sensitivity/Response | CIViC B | EID5599 |
| RRM1 Underexpression | Platinum Compound + Gemcitabine | Lung Non-small Cell Carcinoma | Sensitivity/Response | CIViC B | EID6434 |
| RRM1 Underexpression | Cisplatin + Gemcitabine | Lung Non-small Cell Carcinoma | Sensitivity/Response | CIViC B | EID6436 |
| RRM1 Overexpression | Gemcitabine | Pancreatic Cancer | Resistance | CIViC D | EID1859 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
13 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs1042858 | Efficacy | 4 | gemcitabine | Breast Neoplasms |
| rs1042919 | Efficacy | 3 | cladribine;cytarabine | Leukemia;Myeloid;Acute |
| rs1042927 | Efficacy | 3 | gemcitabine;Platinum compounds | Mesothelioma |
| rs11030918 | Toxicity | 3 | gemcitabine;Platinum compounds | Mesothelioma |
| rs12806698 | Toxicity | 3 | gemcitabine;Platinum compounds | Mesothelioma |
| rs12806698 | Efficacy | 3 | gemcitabine;Platinum compounds | Non-Small Cell Lung Carcinoma |
| rs1561876 | Efficacy | 3 | cladribine;cytarabine | Leukemia;Myeloid;Acute |
| rs183484 | Efficacy | 3 | gemcitabine | Neoplasms |
| rs2284449 | Efficacy | 3 | cisplatin;gemcitabine | Non-Small Cell Lung Carcinoma |
| rs232043 | Efficacy | 3 | cisplatin;gemcitabine | Non-Small Cell Lung Carcinoma |
| rs2898950 | Efficacy | 3 | cladribine;cytarabine | Leukemia;Myeloid;Acute |
| rs720106 | Efficacy | 3 | cisplatin;gemcitabine | Non-Small Cell Lung Carcinoma |
| rs9937 | Efficacy,Toxicity | 3 | gemcitabine | Neoplasms |
PharmGKB variants
16 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs9937 | RRM1 | 3 | 5.75 | 1 | gemcitabine |
| rs183484 | RRM1 | 3 | 0.50 | 1 | gemcitabine |
| rs232043 | RRM1 | 3 | 3.00 | 1 | cisplatin;gemcitabine |
| rs720106 | RRM1 | 3 | 3.00 | 1 | cisplatin;gemcitabine |
| rs725518 | RRM1 | 0.00 | 0 | ||
| rs1042858 | RRM1 | 4 | -0.50 | 1 | gemcitabine |
| rs1042919 | RRM1 | 3 | 2.25 | 1 | cladribine;cytarabine |
| rs1042927 | RRM1 | 3 | 1.25 | 1 | gemcitabine;Platinum compounds |
| rs1561876 | RRM1, STIM1 | 3 | 2.75 | 1 | cladribine;cytarabine |
| rs2284449 | RRM1 | 3 | 3.00 | 1 | cisplatin;gemcitabine |
| rs2898950 | RRM1, STIM1 | 3 | 1.75 | 1 | cladribine;cytarabine |
| rs3817657 | RRM1 | 0.00 | 0 | ||
| rs7940013 | RRM1 | 0.00 | 0 | ||
| rs11030918 | RRM1, STIM1 | 3 | 3.00 | 1 | gemcitabine;Platinum compounds |
| rs12806698 | RRM1, STIM1 | 3 | 3.00 | 2 | gemcitabine;Platinum compounds |
| rs1735053 | RRM1 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — 1.17.4.1 Ribonucleoside-diphosphate reductases
Most potent curated ligand interactions (4 total), top 4:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| clofarabine | Inhibition | 8.3 | pIC50 |
| TAS1553 | Binding | 7.46 | pKd |
| fludarabine | Inhibition | 6.0 | pIC50 |
| hydroxyurea | Inhibition | 3.83 | pIC50 |
Binding affinities (BindingDB)
15 measured of 15 human assays (15 total across all organisms); most potent 15 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| (4S)-5-chloro-N-[(1S,2R)-2-(6-fluoro-2,3-dimethylphenyl)-1-(2-oxo-3H-1,3,4-oxadiazol-5-yl)propyl]-4-hydroxy-4-(trideuteriomethyl)-2,3-dihydrochromene-8-sulfonamide | IC50 | 30 nM | US-12344588: Sulfonamide compounds and use thereof |
| 5-chloro-N-[(1S,2R)-2-(6-fluoro-2,3-dimethylphenyl)-1-(2-oxo-3H-1,3,4-oxadiazol-5-yl)propyl]-4-hydroxy-4-(trideuteriomethyl)-2,3-dihydrochromene-8-sulfonamide | IC50 | 30 nM | US-20250223270: Sulfonamide Compounds and Use Thereof |
| dimethylphenyl)-1-(5-oxo-4,5-dihydro- | IC50 | 70 nM | US-20250223270: Sulfonamide Compounds and Use Thereof |
| (4R)-5-chloro-N-[(1S,2R)-2-(6-fluoro-2,3-dimethylphenyl)-1-(2-oxo-3H-1,3,4-oxadiazol-5-yl)propyl]-4-hydroxy-4-(trideuteriomethyl)-2,3-dihydrochromene-8-sulfonamide | IC50 | 80 nM | US-12344588: Sulfonamide compounds and use thereof |
| (4S)-5-chloro-N-[(1S,2R)-2-(3-chloro-6-fluoro-2-methylphenyl)-1-(2-oxo-3H-1,3,4-oxadiazol-5-yl)propyl]-4-hydroxy-4-(trideuteriomethyl)-2,3-dihydrochromene-8-sulfonamide | IC50 | 80 nM | US-12344588: Sulfonamide compounds and use thereof |
| 5-chloro-N-[(1S,2R)-2-(6-fluoro-2,3-dimethylphenyl)-1-(2-oxo-3H-1,3,4-oxadiazol-5-yl)propyl]-4-hydroxy-4-(trideuteriomethyl)-2,3-dihydrochromene-8-sulfonamide | IC50 | 80 nM | US-20250223270: Sulfonamide Compounds and Use Thereof |
| 5-chloro-N-((1S,2R)-2-(3-chloro-6- | IC50 | 80 nM | US-20250223270: Sulfonamide Compounds and Use Thereof |
| 5-chloro-N-((1S,2R)-2-(6-fluoro-2,3- | IC50 | 80 nM | US-20250223270: Sulfonamide Compounds and Use Thereof |
| (4R)-5-chloro-N-[(1S,2R)-2-(3-chloro-6-fluoro-2-methylphenyl)-1-(2-oxo-3H-1,3,4-oxadiazol-5-yl)propyl]-4-hydroxy-4-(trideuteriomethyl)-2,3-dihydrochromene-8-sulfonamide | IC50 | 140 nM | US-12344588: Sulfonamide compounds and use thereof |
| fluoro-2-methylphenyl)-1-(5-oxo-4,5- | IC50 | 140 nM | US-20250223270: Sulfonamide Compounds and Use Thereof |
| Triapine | IC50 | 1200 nM | US-10155732: Ribonucleotide reductase inhibitors and methods of use |
| N-[4-(3,4-dihydroxyphenyl)-1,3-thiazol-2-yl]-3,4-dihydroxybenzamide | IC50 | 9300 nM | US-10155732: Ribonucleotide reductase inhibitors and methods of use |
| N-[4-(3,4-dihydroxyphenyl)-1,3-thiazol-2-yl]benzamide | IC50 | 15300 nM | US-10155732: Ribonucleotide reductase inhibitors and methods of use |
| 3-[(E)-[4-(3,4-dihydroxyphenyl)-1,3-thiazol-2-yl]iminomethyl]-4-hydroxychromen-2-one | IC50 | 19100 nM | US-10155732: Ribonucleotide reductase inhibitors and methods of use |
| Hydroxyurea | IC50 | 148000 nM | US-10155732: Ribonucleotide reductase inhibitors and methods of use |
ChEMBL bioactivities
374 potent at pChembl≥5 of 449 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.22 | IC50 | 0.6 | nM | CHEMBL336289 |
| 9.15 | IC50 | 0.7 | nM | CHEMBL96993 |
| 9.00 | IC50 | 1 | nM | CHEMBL98729 |
| 8.70 | IC50 | 2 | nM | CHEMBL1169533 |
| 8.52 | IC50 | 3 | nM | CHEMBL133754 |
| 8.52 | IC50 | 3 | nM | CHEMBL305199 |
| 8.40 | IC50 | 4 | nM | CHEMBL95998 |
| 8.30 | IC50 | 5 | nM | CHEMBL95766 |
| 8.30 | IC50 | 5 | nM | CHEMBL335164 |
| 8.22 | IC50 | 6 | nM | CHEMBL134961 |
| 8.19 | IC50 | 6.4 | nM | CHEMBL120710 |
| 8.15 | IC50 | 7 | nM | CHEMBL133827 |
| 8.15 | IC50 | 7 | nM | CHEMBL37210 |
| 8.12 | IC50 | 7.5 | nM | CHEMBL431851 |
| 7.82 | IC50 | 15 | nM | CHEMBL71945 |
| 7.75 | IC50 | 18 | nM | CHEMBL443029 |
| 7.70 | IC50 | 20 | nM | CHEMBL6001460 |
| 7.70 | IC50 | 20 | nM | CHEMBL1169532 |
| 7.66 | IC50 | 22 | nM | CHEMBL96993 |
| 7.66 | IC50 | 22 | nM | CHEMBL439791 |
| 7.66 | IC50 | 22 | nM | CHEMBL120060 |
| 7.62 | IC50 | 24 | nM | CHEMBL305229 |
| 7.57 | IC50 | 27 | nM | CHEMBL131682 |
| 7.52 | IC50 | 30 | nM | CHEMBL5941178 |
| 7.52 | IC50 | 30 | nM | CHEMBL5913113 |
| 7.47 | IC50 | 34 | nM | CHEMBL414818 |
| 7.44 | IC50 | 36 | nM | CHEMBL118524 |
| 7.43 | IC50 | 37 | nM | CHEMBL98729 |
| 7.40 | IC50 | 40 | nM | CHEMBL5958580 |
| 7.40 | IC50 | 40 | nM | CHEMBL5777432 |
| 7.40 | IC50 | 40 | nM | CHEMBL132130 |
| 7.37 | IC50 | 43 | nM | CHEMBL99950 |
| 7.30 | IC50 | 50 | nM | CHEMBL5813221 |
| 7.30 | IC50 | 50 | nM | CHEMBL5797621 |
| 7.30 | IC50 | 50 | nM | CHEMBL6028518 |
| 7.30 | IC50 | 50 | nM | CHEMBL5987707 |
| 7.26 | IC50 | 55 | nM | CHEMBL1169533 |
| 7.22 | IC50 | 60 | nM | CHEMBL5775741 |
| 7.22 | IC50 | 60 | nM | CHEMBL5869217 |
| 7.22 | IC50 | 60 | nM | CHEMBL5844268 |
| 7.22 | IC50 | 60 | nM | CHEMBL5793033 |
| 7.22 | IC50 | 60 | nM | CHEMBL5960405 |
| 7.22 | IC50 | 60 | nM | CHEMBL5824595 |
| 7.22 | IC50 | 60 | nM | CHEMBL5935086 |
| 7.22 | IC50 | 60 | nM | CHEMBL6057994 |
| 7.22 | IC50 | 60 | nM | CHEMBL5813221 |
| 7.22 | IC50 | 60 | nM | CHEMBL5988394 |
| 7.22 | IC50 | 60 | nM | CHEMBL6019064 |
| 7.22 | IC50 | 60 | nM | CHEMBL6058380 |
| 7.22 | IC50 | 60 | nM | CHEMBL5857144 |
PubChem BioAssay actives
79 with measured affinity, of 546 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4,4-dimethylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0006 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[(2-benzyl-3-phenylpropanoyl)amino]-3-methylbutanoyl]amino]-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0007 | uM |
| 1-[(1S)-2-[[(1S)-1-carboxy-3-methylbutyl]amino]-1-[[(2S)-2-[[(2S)-3-methyl-2-[[(2S)-3-methyl-2-(3-phenylpropanoylamino)butanoyl]amino]butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-2-oxoethyl]cyclopentane-1-carboxylic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0010 | uM |
| (2R)-2-[[(2R)-3-carboxy-2-[[(2S)-2-[[(2R)-2-[[(2R,6S)-2,6-dimethylcyclohexyl]carbamoylamino]-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0020 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0030 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-5,5-dimethyl-4-oxohexanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0030 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3,3-dimethyl-2-[[(2S)-3-methyl-2-(3-phenylpropanoylamino)butanoyl]amino]butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0040 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3-methyl-2-[[(2S)-3-methyl-2-(3-phenylpropanoylamino)butanoyl]amino]butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4,4-dimethylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0050 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2R,5S)-2-(3,3-dimethyl-2-oxobutyl)-6,6-dimethyl-4-oxo-5-(pentan-3-ylcarbamoylamino)heptanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0050 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-[[(2S)-1-hydroxy-4,4-dimethylpentan-2-yl]amino]-4-oxobutanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0060 | uM |
| 1-[(1S)-2-[[(1S)-1-carboxy-3-methylbutyl]amino]-1-[[(2S)-2-[[(2S)-2-(2-ethylbutanoylamino)-3,3-dimethylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-2-oxoethyl]cyclopent-3-ene-1-carboxylic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0064 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-2-(heptan-4-ylcarbamoylamino)-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0070 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S,5S)-6,6-dimethyl-4-oxo-2-(2-oxo-2-pyrrolidin-1-ylethyl)-5-(pentan-3-ylcarbamoylamino)heptanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0070 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3-methyl-2-[[(2S)-3-methyl-2-[methyl(3-phenylpropanoyl)amino]butanoyl]amino]butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0075 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3-methyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0150 | uM |
| (3S)-4-[[(3R)-2,2-dimethylpentan-3-yl]amino]-3-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-oxobutanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0180 | uM |
| (2R)-2-[[(2R)-3-carboxy-2-[[(2S)-2-[[(2R)-2-[[(2S,6S)-2,6-dimethylcyclohexyl]carbamoylamino]-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid;(2R)-2-[[(2R)-3-carboxy-2-[[(2S)-2-[[(2R)-2-[[(2R,6R)-2,6-dimethylcyclohexyl]carbamoylamino]-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0200 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2S)-2-[[(2S)-2-[(2-benzyl-3-phenylpropanoyl)-methylamino]-3-methylbutanoyl]amino]-3-methylbutanoyl]amino]-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0220 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-cyclohexyl-2-(3-phenylpropanoylamino)acetyl]amino]-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0220 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3-methyl-2-[[(2S)-3-methyl-2-(3-phenylpropanoylamino)butanoyl]amino]butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0240 | uM |
| (3S)-4-[[(2R)-3,3-dimethylbutan-2-yl]amino]-3-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-oxobutanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0270 | uM |
| (3S)-4-[[(2S)-1-hydroxy-4,4-dimethylpentan-2-yl]amino]-3-[[(2S)-2-[[(2S)-3-methyl-2-[[(2S)-3-methyl-2-(3-phenylpropanoylamino)butanoyl]amino]butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-oxobutanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0340 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(3-phenylpropanoylamino)butanoyl]amino]-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0360 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-(2,2-dimethylpropylamino)-4-oxobutanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.0400 | uM |
| (3S)-4-[[(1S)-1-carboxy-3-methylbutyl]amino]-3-[[(2S)-2-[[(2S)-2-(2-ethylbutanoylamino)-3,3-dimethylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-2,2-dimethyl-4-oxobutanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0430 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3-methyl-2-[[(2S,3S)-3-methyl-2-(3-phenylpropanoylamino)pentanoyl]amino]butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.0610 | uM |
| (3S)-4-(3,3-dimethylbutylamino)-3-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-oxobutanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.1000 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2S)-2-[[(2S)-2-[(2-benzyl-3-phenylpropanoyl)amino]-3-methylbutanoyl]amino]-3-methylbutanoyl]amino]-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.1800 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3-methyl-2-[[(2S)-2-(3-phenylpropanoylamino)butanoyl]amino]butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.3400 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-(3-methylbutylamino)-4-oxobutanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.3500 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-3-methyl-2-(propan-2-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.4400 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-2-(cyclohexylcarbamoylamino)-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.5000 | uM |
| (2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[(2S)-2-(2-ethylbutanoylamino)-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 0.8600 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2S)-3-methyl-2-[[(2S)-3-methyl-2-[[(2R)-2-methyl-3-phenylpropanoyl]amino]butanoyl]amino]butanoyl]amino]-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.8600 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-acetamido-3-methylbutanoyl]amino]-3-methylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 198112: In vitro inhibitory activity against HSV ribonucleotide reductase | ic50 | 0.8800 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S,3R)-2-[[2-[[(2S)-2-[[(2S)-2-[[(2S)-2-acetamido-3-(4-nitrophenyl)propanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]propanoyl]amino]acetyl]amino]-3-hydroxybutanoyl]amino]-3-methylbutanoyl]amino]-3-methylpentanoyl]amino]-4-amino-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 197834: Inhibitory concentration against HSV-1 ribonucleotide reductase R1 protein binding | ic50 | 1.5000 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149321: Binding affinity to human RRM1 incubated for 45 mins by Kinobead based pull down assay | kd | 1.6693 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[2-[9H-fluoren-9-ylmethoxycarbonyl(methyl)amino]-2-phenylacetyl]amino]-4-methylpentanoyl]amino]propanoyl]amino]-3-cyclohexylpropanoyl]amino]-4-[[(1S)-1-carboxy-2-phenylethyl]amino]-4-oxobutanoic acid | 242343: Inhibition of mammalian ribonucleotide reductase in a standard dTTP-dependent GDP reductase assay | ic50 | 1.9000 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S,3R)-2-[[2-[[(2S)-2-[[(2S)-2-acetamido-3-(1H-indol-3-yl)propanoyl]amino]propanoyl]amino]acetyl]amino]-3-hydroxybutanoyl]amino]-3-methylbutanoyl]amino]-3-methylpentanoyl]amino]-4-amino-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 197834: Inhibitory concentration against HSV-1 ribonucleotide reductase R1 protein binding | ic50 | 1.9000 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-(2-methylpropylamino)-4-oxobutanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 1.9000 | uM |
| (3S)-4-[[(3S)-2,2-dimethylpentan-3-yl]amino]-3-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-oxobutanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 2.0000 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S,3R)-2-[[2-[[(2S)-2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]-3-hydroxypropanoyl]amino]acetyl]amino]-3-hydroxybutanoyl]amino]-3-methylbutanoyl]amino]-3-methylpentanoyl]amino]-4-amino-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 198110: Inhibitory concentration against HSV-1 ribonucleotide reductase R1 protein binding | ic50 | 2.2000 | uM |
| (4S)-5-[[(2S)-1-[[(2S)-3-carboxy-1-[[(1S)-1-carboxy-2-phenylethyl]amino]-1-oxopropan-2-yl]amino]-3-cyclohexyl-1-oxopropan-2-yl]amino]-4-[[(2S)-2-[[3-(9H-fluoren-9-ylmethoxy)-3-oxo-2-phenylpropanoyl]amino]-4-methylpentanoyl]amino]-5-oxopentanoic acid | 242343: Inhibition of mammalian ribonucleotide reductase in a standard dTTP-dependent GDP reductase assay | ic50 | 2.4000 | uM |
| (3S)-3-[[(2S)-2-[[(2S)-3-carboxy-2-[[(2S)-2-[[3-(9H-fluoren-9-ylmethoxy)-3-oxo-2-phenylpropanoyl]amino]-4-methylpentanoyl]amino]propanoyl]amino]-3-cyclohexylpropanoyl]amino]-4-[[(1S)-1-carboxy-2-phenylethyl]amino]-4-oxobutanoic acid | 242343: Inhibition of mammalian ribonucleotide reductase in a standard dTTP-dependent GDP reductase assay | ic50 | 2.4000 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S,3S)-2-[[(2S,3R)-2-[[2-[[(2S)-2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]propanoyl]amino]acetyl]amino]-3-hydroxybutanoyl]amino]-3-methylpentanoyl]amino]-3-methylpentanoyl]amino]-4-amino-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 198110: Inhibitory concentration against HSV-1 ribonucleotide reductase R1 protein binding | ic50 | 2.6000 | uM |
| (3S)-4-[[(2S)-3,3-dimethylbutan-2-yl]amino]-3-[[(2S)-2-[[(2S)-3,3-dimethyl-2-(pentan-3-ylcarbamoylamino)butanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-4-oxobutanoic acid | 197982: Inhibitory effect was evaluated on Herpes simplex virus (HSV) ribonucleotide reductase (RR) enzyme. | ic50 | 2.7000 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S,3R)-2-[[2-[[(2S)-2-[[(2S)-2-acetamido-3-(4-hydroxy-3-iodophenyl)propanoyl]amino]propanoyl]amino]acetyl]amino]-3-hydroxybutanoyl]amino]-3-methylbutanoyl]amino]-3-methylpentanoyl]amino]-4-amino-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 197834: Inhibitory concentration against HSV-1 ribonucleotide reductase R1 protein binding | ic50 | 2.8000 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S,3R)-2-[[2-[[(2R)-2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]-3-sulfanylpropanoyl]amino]acetyl]amino]-3-hydroxybutanoyl]amino]-3-methylbutanoyl]amino]-3-methylpentanoyl]amino]-4-amino-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 198110: Inhibitory concentration against HSV-1 ribonucleotide reductase R1 protein binding | ic50 | 3.1000 | uM |
| 1-[(1S)-1-[[(2S)-2-[[(2S)-2-[[(2S)-2-[(2-benzyl-3-phenylpropanoyl)-methylamino]-3-methylbutanoyl]amino]-3,3-dimethylbutanoyl]amino]-4-oxo-4-pyrrolidin-1-ylbutanoyl]amino]-2-[[(2S)-1-hydroxy-4,4-dimethylpentan-2-yl]amino]-2-oxoethyl]cyclopentane-1-carboxylic acid | 41530: Inhibitory activity against HSV-1 in baby hamster kidney cell | ec50 | 3.1000 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S,3R)-2-[[2-[[(2S)-2-[[(2S)-2-acetamido-3-(4-hydroxyphenyl)propanoyl]amino]propanoyl]amino]acetyl]amino]-3-hydroxybutanoyl]amino]-3-methylbutanoyl]amino]-3-methylpentanoyl]amino]-4-amino-4-oxobutanoyl]amino]-3-carboxypropanoyl]amino]-4-methylpentanoic acid | 198110: Inhibitory concentration against HSV-1 ribonucleotide reductase R1 protein binding | ic50 | 3.2000 | uM |
CTD chemical–gene interactions
95 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects expression, decreases expression | 4 |
| Arsenic Trioxide | affects binding, decreases reaction, decreases expression, increases expression | 4 |
| Acetaminophen | increases expression, decreases expression | 3 |
| Cyclosporine | affects expression, decreases expression | 3 |
| sodium arsenite | decreases methylation, increases expression | 2 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | decreases expression, affects cotreatment, increases expression | 2 |
| Resveratrol | affects cotreatment, increases expression | 2 |
| Gemcitabine | decreases response to substance, increases expression, affects response to substance | 2 |
| Benzo(a)pyrene | increases expression, increases methylation | 2 |
| Cisplatin | increases expression | 2 |
| Estradiol | increases expression | 2 |
| Hydrogen Peroxide | affects expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Valproic Acid | decreases expression | 2 |
| tert-Butylhydroperoxide | affects expression, decreases expression | 2 |
| Vitamin K 3 | affects expression | 2 |
| 3-((6-(2-methoxyphenyl)pyrimidin-4-yl)amino)phenyl)methane sulfonamide | decreases reaction, increases degradation, decreases expression | 1 |
| dicrotophos | decreases expression | 1 |
| bismuth tripotassium dicitrate | increases expression | 1 |
| 2,4,6-tribromophenol | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| 2,2’-methylenebis(4-methyl-6-tert-butylphenol) | affects expression, affects response to substance | 1 |
| methylselenic acid | affects expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| beta-lapachone | increases expression | 1 |
| arsenite | affects binding, decreases reaction, increases reaction | 1 |
| afimoxifene | decreases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| tetrabromobisphenol A | decreases expression | 1 |
ChEMBL screening assays
83 unique, capped per target: 80 binding, 3 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3243357 | Binding | Inhibition of RRM1 in human U2OS cells assessed as gammaH2AX induction after 2 hrs by FITC/propidium iodide-staining based flow cytometry in presence of SCH900776 | The identification of novel 5’-amino gemcitabine analogs as potent RRM1 inhibitors. — Bioorg Med Chem |
| CHEMBL652605 | Functional | Inhibitory activity against HSV-1 in baby hamster kidney cell | Peptidomimetic inhibitors of herpes simplex virus ribonucleotide reductase: a new class of antiviral agents. — J Med Chem |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Associated diseases: progressive external ophthalmoplegia with mitochondrial DNA deletions, progressive external ophthalmoplegia with mitochondrial dna deletions, autosomal recessive 6, malignant pancreatic neoplasm
- Biomarker drugs (CIViC) (drugs whose response is associated with variants in this gene — CIViC predictive evidence, not targeting): Gemcitabine
- Targeted by drugs: Clofarabine, Fludarabine, Gemcitabine, Hydroxyurea
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): exocrine pancreatic carcinoma, malaria, malignant pancreatic neoplasm, non-small cell lung carcinoma, progressive external ophthalmoplegia with mitochondrial DNA deletions, progressive external ophthalmoplegia with mitochondrial dna deletions, autosomal recessive 6