RSF1-IT1

Summary

RSF1-IT1 (RSF1 intronic transcript 1, HGNC:41439) is a long non-coding RNA gene on chromosome 11q14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41439
Approved symbol	RSF1-IT1
Name	RSF1 intronic transcript 1
Location	11q14.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255409
Ensembl biotype	lncRNA
Entrez	100874308
RNAcentral	URS00025E34B1 — lncRNA, 1284 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000528233

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000528233 — 2 exons

Exon	Start	End
ENSE00002166266	77738680	77738930
ENSE00002172813	77739188	77739568

Expression profiles

Bgee: expression breadth ubiquitous, 115 present calls, max score 80.40.

Top tissues by expression

115 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	80.40	gold quality
ganglionic eminence	UBERON:0004023	73.09	gold quality
bone marrow	UBERON:0002371	66.08	gold quality
skeletal muscle tissue	UBERON:0001134	66.07	gold quality
ventricular zone	UBERON:0003053	65.44	gold quality
stromal cell of endometrium	CL:0002255	63.28	gold quality
colonic epithelium	UBERON:0000397	63.20	silver quality
hindlimb stylopod muscle	UBERON:0004252	60.19	gold quality
prefrontal cortex	UBERON:0000451	55.84	gold quality
lymph node	UBERON:0000029	55.34	gold quality
monocyte	CL:0000576	54.70	gold quality
adrenal tissue	UBERON:0018303	54.64	gold quality
endometrium	UBERON:0001295	54.44	gold quality
tonsil	UBERON:0002372	53.90	silver quality
blood	UBERON:0000178	53.55	gold quality
liver	UBERON:0002107	53.52	silver quality
duodenum	UBERON:0002114	53.38	gold quality
gall bladder	UBERON:0002110	52.67	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.25	gold quality
islet of Langerhans	UBERON:0000006	52.21	gold quality
vermiform appendix	UBERON:0001154	51.85	gold quality
calcaneal tendon	UBERON:0003701	51.49	silver quality
right lobe of liver	UBERON:0001114	50.87	gold quality
ectocervix	UBERON:0012249	49.84	gold quality
muscle of leg	UBERON:0001383	49.40	gold quality
popliteal artery	UBERON:0002250	48.90	gold quality
tibial artery	UBERON:0007610	48.84	gold quality
left coronary artery	UBERON:0001626	48.74	gold quality
gastrocnemius	UBERON:0001388	48.58	gold quality
adrenal gland	UBERON:0002369	48.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.74

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.