RSPH1-DT

Summary

RSPH1-DT (RSPH1 divergent transcript, HGNC:55644) is a long non-coding RNA gene on chromosome 21q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55644
Approved symbol	RSPH1-DT
Name	RSPH1 divergent transcript
Location	21q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000239930
Ensembl biotype	lncRNA
Entrez	101930094
RNAcentral	URS0000A7731B — lncRNA, 463 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000416179

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000416179 — 3 exons

Exon	Start	End
ENSE00001594678	42497233	42497443
ENSE00001740000	42496823	42496933
ENSE00001742222	42496539	42496665

Expression profiles

Bgee: expression breadth ubiquitous, 103 present calls, max score 95.88.

Top tissues by expression

103 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	95.88	gold quality
left testis	UBERON:0004533	79.70	gold quality
testis	UBERON:0000473	78.75	gold quality
right testis	UBERON:0004534	76.98	gold quality
bone marrow cell	CL:0002092	71.85	gold quality
bone marrow	UBERON:0002371	61.48	gold quality
duodenum	UBERON:0002114	61.06	gold quality
muscle tissue	UBERON:0002385	60.00	silver quality
monocyte	CL:0000576	59.61	gold quality
prefrontal cortex	UBERON:0000451	59.52	gold quality
leukocyte	CL:0000738	59.31	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	57.56	gold quality
liver	UBERON:0002107	57.27	gold quality
islet of Langerhans	UBERON:0000006	56.55	gold quality
gall bladder	UBERON:0002110	56.13	gold quality
pituitary gland	UBERON:0000007	54.54	gold quality
superior frontal gyrus	UBERON:0002661	53.98	gold quality
right lobe of liver	UBERON:0001114	53.88	gold quality
adenohypophysis	UBERON:0002196	53.77	gold quality
primary visual cortex	UBERON:0002436	53.68	gold quality
blood	UBERON:0000178	53.45	gold quality
rectum	UBERON:0001052	52.88	gold quality
lymph node	UBERON:0000029	52.50	gold quality
frontal cortex	UBERON:0001870	51.42	gold quality
fundus of stomach	UBERON:0001160	50.83	gold quality
small intestine	UBERON:0002108	50.30	gold quality
multicellular organism	UBERON:0000468	50.28	gold quality
hypothalamus	UBERON:0001898	50.27	gold quality
temporal lobe	UBERON:0001871	50.17	gold quality
amygdala	UBERON:0001876	50.11	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.86

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.