RTN4RL1-AS1

Summary

RTN4RL1-AS1 (RTN4RL1 antisense RNA 1, HGNC:58360) is a long non-coding RNA gene on chromosome 17p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58360
Approved symbol	RTN4RL1-AS1
Name	RTN4RL1 antisense RNA 1
Location	17p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228133
Ensembl biotype	lncRNA
Entrez	105371485

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000425277, ENST00000572287, ENST00000670164

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000425277 — 2 exons

Exon	Start	End
ENSE00001593054	2017883	2018107
ENSE00001789462	2019185	2020706

Expression profiles

Bgee: expression breadth ubiquitous, 104 present calls, max score 80.18.

Top tissues by expression

204 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.18	gold quality
pancreatic ductal cell	CL:0002079	78.53	silver quality
bone marrow cell	CL:0002092	66.59	silver quality
liver	UBERON:0002107	62.63	gold quality
right lobe of liver	UBERON:0001114	62.15	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.10	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	61.93	gold quality
right testis	UBERON:0004534	61.20	gold quality
myocardium	UBERON:0002349	61.15	gold quality
duodenum	UBERON:0002114	60.77	gold quality
tendon of biceps brachii	UBERON:0008188	60.02	gold quality
left testis	UBERON:0004533	59.89	gold quality
nasal cavity epithelium	UBERON:0005384	58.94	gold quality
jejunal mucosa	UBERON:0000399	58.91	gold quality
Brodmann (1909) area 23	UBERON:0013554	58.91	gold quality
middle temporal gyrus	UBERON:0002771	58.77	gold quality
islet of Langerhans	UBERON:0000006	58.60	gold quality
testis	UBERON:0000473	58.60	gold quality
prefrontal cortex	UBERON:0000451	58.36	gold quality
superficial temporal artery	UBERON:0001614	58.35	gold quality
buccal mucosa cell	CL:0002336	57.56	gold quality
kidney epithelium	UBERON:0004819	56.66	gold quality
calcaneal tendon	UBERON:0003701	55.68	gold quality
kidney	UBERON:0002113	55.64	gold quality
primary visual cortex	UBERON:0002436	55.54	silver quality
adult mammalian kidney	UBERON:0000082	55.28	gold quality
quadriceps femoris	UBERON:0001377	54.46	gold quality
pancreas	UBERON:0001264	54.37	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.