RTN4RL1-AS2

Summary

RTN4RL1-AS2 (RTN4RL1 antisense RNA 2, HGNC:58547) is a long non-coding RNA gene on chromosome 17p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58547
Approved symbol	RTN4RL1-AS2
Name	RTN4RL1 antisense RNA 2
Location	17p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000262445
Ensembl biotype	lncRNA
Entrez	142592814

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000574520

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000574520 — 3 exons

Exon	Start	End
ENSE00002639398	2001430	2001564
ENSE00002655662	1995614	1995703
ENSE00002683259	2003027	2003671

Expression profiles

Bgee: expression breadth ubiquitous, 109 present calls, max score 78.44.

Top tissues by expression

109 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.44	silver quality
duodenum	UBERON:0002114	78.19	gold quality
right lobe of liver	UBERON:0001114	74.83	gold quality
liver	UBERON:0002107	74.51	gold quality
adult mammalian kidney	UBERON:0000082	66.76	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	65.44	gold quality
kidney	UBERON:0002113	65.13	gold quality
skeletal muscle tissue	UBERON:0001134	64.65	gold quality
muscle tissue	UBERON:0002385	64.31	gold quality
sural nerve	UBERON:0015488	62.27	silver quality
hindlimb stylopod muscle	UBERON:0004252	61.81	gold quality
tonsil	UBERON:0002372	60.20	silver quality
gall bladder	UBERON:0002110	57.32	gold quality
left testis	UBERON:0004533	55.60	gold quality
cortex of kidney	UBERON:0001225	55.39	gold quality
testis	UBERON:0000473	55.01	gold quality
stromal cell of endometrium	CL:0002255	54.67	silver quality
small intestine	UBERON:0002108	54.67	gold quality
right testis	UBERON:0004534	54.15	gold quality
monocyte	CL:0000576	53.66	gold quality
muscle of leg	UBERON:0001383	53.54	gold quality
gastrocnemius	UBERON:0001388	53.20	gold quality
intestine	UBERON:0000160	52.75	gold quality
islet of Langerhans	UBERON:0000006	52.32	gold quality
primary visual cortex	UBERON:0002436	51.18	gold quality
metanephros cortex	UBERON:0010533	50.95	gold quality
blood	UBERON:0000178	50.67	silver quality
prefrontal cortex	UBERON:0000451	49.87	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.02	gold quality
colon	UBERON:0001155	48.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.