RUFY1-AS1

Summary

RUFY1-AS1 (RUFY1 antisense RNA 1, HGNC:40903) is a long non-coding RNA gene on chromosome 5q35.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40903
Approved symbol	RUFY1-AS1
Name	RUFY1 antisense RNA 1
Location	5q35.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000244945
Ensembl biotype	lncRNA
Entrez	101928445
RNAcentral	URS00003856C6 — lncRNA, 1966 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000500262

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000500262 — 9 exons

Exon	Start	End
ENSE00001967150	179603607	179603741
ENSE00001970280	179598253	179598355
ENSE00001974739	179596822	179596961
ENSE00001976151	179600073	179600098
ENSE00001976900	179602064	179602266
ENSE00001978132	179595904	179596593
ENSE00001980790	179602377	179602772
ENSE00001982304	179599268	179599389
ENSE00001984122	179599485	179599635

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 81.90.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
mucosa of stomach	UBERON:0001199	81.90	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.54	gold quality
muscle layer of sigmoid colon	UBERON:0035805	77.73	gold quality
tibial artery	UBERON:0007610	76.27	gold quality
popliteal artery	UBERON:0002250	76.26	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	74.84	gold quality
lower esophagus muscularis layer	UBERON:0035833	74.67	gold quality
lower esophagus	UBERON:0013473	74.56	gold quality
right coronary artery	UBERON:0001625	74.34	gold quality
gastrocnemius	UBERON:0001388	72.23	gold quality
left coronary artery	UBERON:0001626	72.23	gold quality
muscle of leg	UBERON:0001383	71.64	gold quality
colon	UBERON:0001155	70.28	gold quality
descending thoracic aorta	UBERON:0002345	69.93	gold quality
left uterine tube	UBERON:0001303	69.38	gold quality
urinary bladder	UBERON:0001255	69.28	gold quality
body of uterus	UBERON:0009853	68.83	gold quality
thoracic aorta	UBERON:0001515	68.77	gold quality
ascending aorta	UBERON:0001496	68.53	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.29	gold quality
fundus of stomach	UBERON:0001160	68.19	gold quality
intestine	UBERON:0000160	68.01	gold quality
skeletal muscle tissue	UBERON:0001134	67.61	gold quality
esophagus	UBERON:0001043	67.19	gold quality
transverse colon	UBERON:0001157	66.84	gold quality
myometrium	UBERON:0001296	66.56	gold quality
smooth muscle tissue	UBERON:0001135	65.82	gold quality
bone marrow cell	CL:0002092	65.46	silver quality
prostate gland	UBERON:0002367	64.96	gold quality
ectocervix	UBERON:0012249	64.00	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.28

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.