RUNDC3A-AS1

Summary

RUNDC3A-AS1 (RUNDC3A antisense RNA 1, HGNC:51344) is a long non-coding RNA gene on chromosome 17q21.31.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 101926996 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51344
Approved symbol	RUNDC3A-AS1
Name	RUNDC3A antisense RNA 1
Location	17q21.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267750
Ensembl biotype	lncRNA
Entrez	101926996
RNAcentral	URS000075A143 — lncRNA, 5081 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 20 — 20 lncRNA

ENST00000586388, ENST00000588097, ENST00000655016, ENST00000666090, ENST00000753094, ENST00000753095, ENST00000753096, ENST00000753097, ENST00000753098, ENST00000753099, ENST00000753100, ENST00000753101, ENST00000753102, ENST00000753103, ENST00000753104, ENST00000753105, ENST00000753106, ENST00000753107, ENST00000753108, ENST00000753109

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000586388 — 4 exons

Exon	Start	End
ENSE00001596561	44307292	44307500
ENSE00002747331	44304981	44305043
ENSE00004099906	44302517	44304207
ENSE00004099922	44308257	44308489

Expression profiles

Bgee: expression breadth ubiquitous, 150 present calls, max score 96.44.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0992 / max 20.4970, expressed in 41 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
166359	0.0992	41

Top tissues by expression

236 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	96.44	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.26	gold quality
adenohypophysis	UBERON:0002196	74.43	gold quality
pituitary gland	UBERON:0000007	73.75	gold quality
right hemisphere of cerebellum	UBERON:0014890	72.31	gold quality
cerebellar hemisphere	UBERON:0002245	72.01	gold quality
cerebellar cortex	UBERON:0002129	71.83	gold quality
cerebellum	UBERON:0002037	69.76	gold quality
cortical plate	UBERON:0005343	66.26	gold quality
right frontal lobe	UBERON:0002810	65.61	gold quality
islet of Langerhans	UBERON:0000006	64.89	gold quality
Brodmann (1909) area 9	UBERON:0013540	64.14	gold quality
nucleus accumbens	UBERON:0001882	63.85	gold quality
pancreas	UBERON:0001264	62.86	gold quality
body of pancreas	UBERON:0001150	62.79	gold quality
ganglionic eminence	UBERON:0004023	62.49	gold quality
anterior cingulate cortex	UBERON:0009835	62.21	gold quality
ventricular zone	UBERON:0003053	61.68	gold quality
left lobe of thyroid gland	UBERON:0001120	61.56	gold quality
thyroid gland	UBERON:0002046	61.08	gold quality
putamen	UBERON:0001874	61.00	gold quality
left testis	UBERON:0004533	60.82	gold quality
testis	UBERON:0000473	60.72	gold quality
left adrenal gland cortex	UBERON:0035825	60.60	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	60.59	gold quality
right testis	UBERON:0004534	60.22	gold quality
left adrenal gland	UBERON:0001234	59.98	gold quality
hypothalamus	UBERON:0001898	59.96	gold quality
right lobe of thyroid gland	UBERON:0001119	59.69	gold quality
right adrenal gland	UBERON:0001233	59.57	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.06

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.