RXFP1-AS1

Summary

RXFP1-AS1 (RXFP1 antisense RNA 1, HGNC:40897) is a long non-coding RNA gene on chromosome 4q32.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40897
Approved symbol	RXFP1-AS1
Name	RXFP1 antisense RNA 1
Location	4q32.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249901
Ensembl biotype	lncRNA
Entrez	124900802

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000502566

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502566 — 3 exons

Exon	Start	End
ENSE00002039068	158490766	158490895
ENSE00002075158	158494926	158495056
ENSE00002086582	158509511	158509908

Expression profiles

Bgee: expression breadth broad, 26 present calls, max score 81.65.

Top tissues by expression

26 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.65	gold quality
endometrium	UBERON:0001295	59.15	gold quality
monocyte	CL:0000576	54.33	gold quality
prefrontal cortex	UBERON:0000451	53.09	gold quality
blood	UBERON:0000178	52.28	gold quality
myometrium	UBERON:0001296	51.23	gold quality
vermiform appendix	UBERON:0001154	50.57	gold quality
Ammon’s horn	UBERON:0001954	50.57	gold quality
hypothalamus	UBERON:0001898	47.05	gold quality
vagina	UBERON:0000996	45.35	gold quality
stomach	UBERON:0000945	45.17	gold quality
cerebellar cortex	UBERON:0002129	45.01	silver quality
cerebral cortex	UBERON:0000956	44.96	gold quality
right hemisphere of cerebellum	UBERON:0014890	44.28	gold quality
Brodmann (1909) area 9	UBERON:0013540	43.52	silver quality
right frontal lobe	UBERON:0002810	42.05	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	41.45	silver quality
tibial artery	UBERON:0007610	40.84	silver quality
ascending aorta	UBERON:0001496	40.54	silver quality
thoracic aorta	UBERON:0001515	40.31	silver quality
anterior cingulate cortex	UBERON:0009835	40.17	silver quality
tibial nerve	UBERON:0001323	39.98	silver quality
ectocervix	UBERON:0012249	37.31	silver quality
caudate nucleus	UBERON:0001873	35.49	silver quality
amygdala	UBERON:0001876	34.62	silver quality
right testis	UBERON:0004534	23.86	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.