S1PR1
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Also known as edg-1D1S3362CD363
Summary
S1PR1 (sphingosine-1-phosphate receptor 1, HGNC:3165) is a protein-coding gene on chromosome 1p21.2, encoding Sphingosine 1-phosphate receptor 1 (P21453). G-protein coupled receptor for the bioactive lysosphingolipid sphingosine 1-phosphate (S1P) that seems to be coupled to the G(i) subclass of heteromeric G proteins.
The protein encoded by this gene is structurally similar to G protein-coupled receptors and is highly expressed in endothelial cells. It binds the ligand sphingosine-1-phosphate with high affinity and high specificity, and suggested to be involved in the processes that regulate the differentiation of endothelial cells. Activation of this receptor induces cell-cell adhesion. Alternative splicing results in multiple transcript variants.
Source: NCBI Gene 1901 — RefSeq curated summary.
At a glance
- GWAS associations: 15
- Clinical variants (ClinVar): 28 total
- Druggable target: yes — 13 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_001400
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3165 |
| Approved symbol | S1PR1 |
| Name | sphingosine-1-phosphate receptor 1 |
| Location | 1p21.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | edg-1, D1S3362, CD363 |
| Ensembl gene | ENSG00000170989 |
| Ensembl biotype | protein_coding |
| OMIM | 601974 |
| Entrez | 1901 |
Gene structure
Transcript identifiers
Ensembl transcripts: 10 — 9 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000305352, ENST00000475289, ENST00000475821, ENST00000561748, ENST00000648480, ENST00000649383, ENST00000876129, ENST00000876130, ENST00000945456, ENST00000945457
RefSeq mRNA: 2 — MANE Select: NM_001400
NM_001320730, NM_001400
CCDS: CCDS777
Canonical transcript exons
ENST00000305352 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001167649 | 101238822 | 101241518 |
| ENSE00001356737 | 101237019 | 101237099 |
Expression profiles
Bgee: expression breadth ubiquitous, 234 present calls, max score 97.46.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 37.1880 / max 678.4133, expressed in 1264 samples.
FANTOM5 promoters (11 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 4274 | 19.2770 | 1020 |
| 4277 | 9.3688 | 1034 |
| 4273 | 3.3973 | 518 |
| 4272 | 2.0522 | 492 |
| 4276 | 0.7981 | 395 |
| 4275 | 0.7692 | 339 |
| 4279 | 0.6389 | 237 |
| 4278 | 0.2929 | 157 |
| 4281 | 0.2416 | 143 |
| 4282 | 0.2138 | 94 |
Top tissues by expression
279 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right lung | UBERON:0002167 | 97.46 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 97.01 | gold quality |
| ventricular zone | UBERON:0003053 | 96.70 | gold quality |
| omental fat pad | UBERON:0010414 | 96.60 | gold quality |
| peritoneum | UBERON:0002358 | 96.50 | gold quality |
| upper lobe of lung | UBERON:0008948 | 96.42 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 96.12 | gold quality |
| granulocyte | CL:0000094 | 95.89 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 95.18 | gold quality |
| apex of heart | UBERON:0002098 | 94.00 | gold quality |
| adipose tissue | UBERON:0001013 | 93.77 | gold quality |
| heart left ventricle | UBERON:0002084 | 93.43 | gold quality |
| cardiac ventricle | UBERON:0002082 | 93.16 | gold quality |
| right atrium auricular region | UBERON:0006631 | 93.06 | gold quality |
| lung | UBERON:0002048 | 92.98 | gold quality |
| caudate nucleus | UBERON:0001873 | 92.69 | gold quality |
| connective tissue | UBERON:0002384 | 92.59 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 92.19 | gold quality |
| ganglionic eminence | UBERON:0004023 | 92.16 | gold quality |
| nucleus accumbens | UBERON:0001882 | 92.06 | gold quality |
| amygdala | UBERON:0001876 | 92.05 | gold quality |
| spleen | UBERON:0002106 | 92.05 | gold quality |
| gall bladder | UBERON:0002110 | 91.95 | gold quality |
| heart | UBERON:0000948 | 91.82 | gold quality |
| putamen | UBERON:0001874 | 91.56 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 91.49 | gold quality |
| adrenal tissue | UBERON:0018303 | 91.10 | gold quality |
| cardiac atrium | UBERON:0002081 | 91.05 | gold quality |
| tibial nerve | UBERON:0001323 | 90.56 | gold quality |
| left uterine tube | UBERON:0001303 | 90.51 | gold quality |
Single-cell (SCXA)
Detected in 17 experiment(s), a significant marker in 12.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-135922 | yes | 44.96 |
| E-MTAB-8410 | yes | 29.08 |
| E-CURD-46 | yes | 29.06 |
| E-GEOD-93593 | yes | 18.27 |
| E-MTAB-9067 | yes | 16.20 |
| E-GEOD-84465 | yes | 13.55 |
| E-MTAB-8498 | yes | 11.38 |
| E-MTAB-9543 | yes | 11.04 |
| E-MTAB-5061 | yes | 6.43 |
| E-GEOD-130148 | yes | 4.92 |
| E-MTAB-9801 | yes | 4.69 |
| E-MTAB-8205 | no | 369.90 |
| E-CURD-95 | no | 272.67 |
| E-MTAB-8911 | no | 201.47 |
| E-CURD-112 | no | 3.85 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): ATF6, CEBPB, ESR1, FLI1, FOS, FOXO1, KLF2, MYC, NFKB1, PITX2, PPARA, PPARG, STAT3, TEAD4
miRNA regulators (miRDB)
110 targeting S1PR1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-3162-3P | 100.00 | 65.37 | 363 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-4789-3P | 99.99 | 70.75 | 2484 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-3065-5P | 99.97 | 71.56 | 3281 |
| HSA-MIR-1468-3P | 99.96 | 72.74 | 3797 |
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
| HSA-MIR-9-3P | 99.96 | 70.88 | 2068 |
| HSA-MIR-559 | 99.95 | 72.28 | 3609 |
| HSA-MIR-548AB | 99.95 | 71.31 | 3488 |
| HSA-MIR-548A-5P | 99.94 | 71.27 | 3482 |
| HSA-MIR-548AD-5P | 99.94 | 71.23 | 3502 |
| HSA-MIR-548AE-5P | 99.94 | 71.23 | 3502 |
| HSA-MIR-548AK | 99.94 | 71.24 | 3488 |
| HSA-MIR-548AM-5P | 99.94 | 71.24 | 3488 |
| HSA-MIR-548AP-5P | 99.94 | 71.14 | 3489 |
| HSA-MIR-548AQ-5P | 99.94 | 71.34 | 3426 |
| HSA-MIR-548AR-5P | 99.94 | 71.28 | 3515 |
| HSA-MIR-548AS-5P | 99.94 | 71.22 | 3482 |
| HSA-MIR-548AU-5P | 99.94 | 71.24 | 3488 |
| HSA-MIR-548AY-5P | 99.94 | 71.23 | 3502 |
| HSA-MIR-548B-5P | 99.94 | 71.23 | 3502 |
| HSA-MIR-548BB-5P | 99.94 | 71.27 | 3509 |
Literature-anchored findings (GeneRIF, showing 40)
- in mouse, this protein is essential for vascular maturation (PMID:11032855)
- phosphorylation of the sphingosine 1-phosphate (SSP) receptor “endothelial differentiation gene 1” (EDG1 or S1P(1)) receptor is increased in response to either SSP or phorbol 12-myristate 13-acetate (PMA) exposure but not lysophosphatidic acid (PMID:11741892)
- functions as an intracellular signaling molecule and angiogenesis factor (PMID:11915345)
- activates Rho family G proteins and cell motility (PMID:11915348)
- S1P(1) inhibits Ca(2+) signalling most likely via G(i) proteins and classical PKC isoforms. Co-expression of S1P(1) with S1P(3), but not S1P(2), reversed the inhibitory effect of S1P(1), furthermore suggesting a specific interplay of S1P receptor subtypes (PMID:12742228)
- S1P1 receptors expressed in mouse Th1 cells mediate suppression of T cell proliferation and cytokine production. (PMID:14500646)
- Immunosuppressant FTY720 activates sphingosine 1-phosphate receptors that affect responsiveness of lymphocytes to chemokines such as stromal cell-derived factor 1. (PMID:14988150)
- cross-communication between the prototypical barrier-protective S1P and barrier-disruptive PAR1 pathway (PMID:15626732)
- Persistent expression of S1P1 receptor by lymphocytes of S1P1 receptor-transgenic mice suppresses delayed-type hypersensitivity and results in production of significantly more IgE antibody (Ab) and less IgG2 Ab than in wild-type mice. (PMID:15699128)
- endothelial protein C receptor ligation and sphingosine 1-phosphate receptor transactivation results in endothelial cell cytoskeletal rearrangement and barrier protection through activated protein C (PMID:15710622)
- Signaling by S1P1 receptor-transgenic mice affects systemic trafficking of peripheral T cells and primary immune responses; levels of S1P1 receptor expression represent an important mechanism of immune regulation. (PMID:15728452)
- Tyrosine sulfation of S1P1 may be a major controller of S1P effects on T cell traffic (PMID:16148028)
- S1P-induced recruitment of S1P1 to CEM fractions promotes PI3 kinase-mediated Tiam1/Rac1 activation required for alpha-actinin-1/4-regulated cortical actin rearrangement and EC barrier enhancement (PMID:16195373)
- The constitutively active endogenous S1P1 receptor enhances PDGF-induced cell migration. (PMID:16319133)
- heterotrimeric G protein-dependent ERK1/2 activation is mediated by IGF-1 and IGF-2 by transactivating sphingosine 1-phosphate receptors (PMID:16926156)
- Transactivation of sphingosine 1-phosphate receptors is essential for vascular barrier regulation (PMID:16963454)
- FTY720-P targets the S1P1 receptor to the ubiquitinylation and proteasomal degradation pathway (PMID:17237497)
- Sphingosine 1-phosphate-induced inflammatory response genes expression is mediated through S1P(1) and S1P(3) (PMID:17331465)
- FTY720 induces time-dependent modulation of S1P receptors on human OPCs with consequent functional responses that are directly relevant for the remyelination process. (PMID:17918267)
- S1P(1) receptor, without stimulating Ca(2+) increases, mediates chemotaxis of keratinocytes (PMID:18172456)
- S1P-mediated signaling via the S1P1/Gi/Rho GTPases pathway activates integrin alpha v beta 3, which is indispensable for S1P-stimulated chemotactic response of ECs. (PMID:18247041)
- S1P promotes lymphangiogenesis by stimulating S1P1/G(i)/phospholipase C/Ca(2+) signaling pathways. (PMID:18541717)
- HDL has endothelial barrier promoting activities, which are attributable to its S1P component and signaling through the S1P1/Akt pathway. (PMID:18606817)
- Datas suggest that filamin A links sphingosine kinase 1 and sphingosine-1-phosphate receptor 1 to locally influence the dynamics of actin cytoskeletal structures at lamellipodia to promote cell movement. (PMID:18644866)
- Plays essential roles in the pathogenesis of rheumatoid arthritis by modulating fibroblast-like synoviocyte migration, cytokine/chemokine production, and cell survival. (PMID:18658144)
- FOXO1 controls the expression of L-selectin and EDG1 and EDG6, receptors that regulate lymphocyte trafficking (PMID:18713968)
- S1P(1) acts as an inhibitor of CXCR4-dependent migration of hematopoietic cells to sites of SDF-1 production. (PMID:18760838)
- subconfluent pulmonary artery smooth muscle cells express predominantly S1P2 and S1P3 receptors; S1P1 receptor mRNA levels are significantly up-regulated following bFGF treatment (PMID:18773427)
- the crucial role of activation of the SPHK1S1PS1P1 signaling pathway in response to inflammatory mediators in endothelial cells in regulating endothelial barrier homeostasis. (PMID:18849324)
- plasma membrane S1P(1) receptors are rapidly internalized and subsequently translocated to nuclear compartment upon S1P stimulation; nuclear S1P(1) is able to regulate the transcription of Cyr61 and CTGF (PMID:18936953)
- S1PR1 has an important role in disease-related angiogenesis, especially in the processes of migration/invasion and tube formation. (PMID:19150609)
- Data suggest that human antibodies to the amino terminus of the type 1 sphingosine 1-phosphate receptor suppress T-cell trafficking sufficiently to impair host defense and provide therapeutic immunosuppression. (PMID:19158154)
- Akt-mediated transactivation of the S1P1 receptor in caveolin-enriched microdomains regulates endothelial barrier enhancement by oxidized phospholipids. (PMID:19286607)
- IGFBP-3 in MCF-10A cells requires SphK1 activity and S1P1/S1P3, suggesting that S1P, the product of SphK activity and ligand for S1P1 and S1P3 (PMID:19633297)
- The activation of S1PR results in increased chemotactic response of CD34(+) hematopoietic stem cells to SDF-1. (PMID:19778812)
- downregulation of S1P(1) expression enhances the malignancy of glioblastoma by increasing cell proliferation and correlates with the shorter survival of patients with glioblastoma. (PMID:19810093)
- S1P(1) signaling linked to cell migration is facilitated by a functional interaction with P-Rex1 via a mechanism that involves the maintenance of S1P(1) receptors at the cell membrane. (PMID:20036214)
- Sphingosine-1-phosphate receptor 1 immunohistochemistry may be useful in the histological diagnosis of mantle cell lymphoma with formalin-fixed and paraffin-embedded sections. (PMID:20081804)
- Protein S controls hypoxic/ischemic blood-brain barrier disruption through the TAM receptor Tyro3 and sphingosine 1-phosphate receptor1. (PMID:20348395)
- Mobilization with rhG-CSF obviously down-regulates the expression of S1P1 in CD4+ T cells. (PMID:20416181)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | s1pr1 | ENSDARG00000042690 |
| mus_musculus | S1pr1 | ENSMUSG00000045092 |
| rattus_norvegicus | S1pr1 | ENSRNOG00000013683 |
Paralogs (18): LPAR2 (ENSG00000064547), CNR1 (ENSG00000118432), MC3R (ENSG00000124089), S1PR4 (ENSG00000125910), GPR12 (ENSG00000132975), GPR6 (ENSG00000146360), GPR119 (ENSG00000147262), MC4R (ENSG00000166603), LPAR3 (ENSG00000171517), MC5R (ENSG00000176136), S1PR5 (ENSG00000180739), GPR3 (ENSG00000181773), MC2R (ENSG00000185231), CNR2 (ENSG00000188822), LPAR1 (ENSG00000198121), S1PR3 (ENSG00000213694), MC1R (ENSG00000258839), S1PR2 (ENSG00000267534)
Protein
Protein identifiers
Sphingosine 1-phosphate receptor 1 — P21453 (reviewed: P21453)
Alternative names: Endothelial differentiation G-protein coupled receptor 1, Sphingosine 1-phosphate receptor Edg-1
All UniProt accessions (2): P21453, A0A3B3IUD4
UniProt curated annotations — full annotation on UniProt →
Function. G-protein coupled receptor for the bioactive lysosphingolipid sphingosine 1-phosphate (S1P) that seems to be coupled to the G(i) subclass of heteromeric G proteins. Signaling leads to the activation of RAC1, SRC, PTK2/FAK1 and MAP kinases. Plays an important role in cell migration, probably via its role in the reorganization of the actin cytoskeleton and the formation of lamellipodia in response to stimuli that increase the activity of the sphingosine kinase SPHK1. Required for normal chemotaxis toward sphingosine 1-phosphate. Required for normal embryonic heart development and normal cardiac morphogenesis. Plays an important role in the regulation of sprouting angiogenesis and vascular maturation. Inhibits sprouting angiogenesis to prevent excessive sprouting during blood vessel development. Required for normal egress of mature T-cells from the thymus into the blood stream and into peripheral lymphoid organs. Plays a role in the migration of osteoclast precursor cells, the regulation of bone mineralization and bone homeostasis. Plays a role in responses to oxidized 1-palmitoyl-2-arachidonoyl-sn-glycero-3-phosphocholine by pulmonary endothelial cells and in the protection against ventilator-induced lung injury.
Subunit / interactions. Interacts with GNAI1 and GNAI3. Interacts with CD69; this interaction promotes S1PR1 degradation.
Subcellular location. Cell membrane. Endosome. Membrane raft.
Tissue specificity. Endothelial cells, and to a lesser extent, in vascular smooth muscle cells, fibroblasts, melanocytes, and cells of epithelioid origin.
Post-translational modifications. S1P-induced endothelial cell migration requires the PKB/AKT1-mediated phosphorylation of the third intracellular loop at the Thr-236 residue. Palmitoylated by ZDHHC5. Palmitoylation is required for targeting to plasma membrane, enabling G(i) coupling.
Induction. By the tumor promoter phorbol 12-myristate 13-acetate (PMA) in the presence of cycloheximide.
Similarity. Belongs to the G-protein coupled receptor 1 family.
RefSeq proteins (2): NP_001307659, NP_001391* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR000987 | EDG1 | Family |
| IPR004061 | S1P_rcpt | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
Pfam: PF00001
UniProt features (67 total): helix 13, mutagenesis site 10, topological domain 8, transmembrane region 7, turn 5, strand 5, modified residue 4, sequence variant 3, compositionally biased region 2, binding site 2, glycosylation site 2, disulfide bond 2, chain 1, region of interest 1, lipid moiety-binding region 1, sequence conflict 1
Structure
Experimental structures (PDB)
21 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7TD4 | ELECTRON MICROSCOPY | 2.6 |
| 9VNZ | ELECTRON MICROSCOPY | 2.79 |
| 9VO0 | ELECTRON MICROSCOPY | 2.79 |
| 3V2Y | X-RAY DIFFRACTION | 2.8 |
| 7VIF | ELECTRON MICROSCOPY | 2.83 |
| 7EO4 | ELECTRON MICROSCOPY | 2.86 |
| 7VIE | ELECTRON MICROSCOPY | 2.86 |
| 7EO2 | ELECTRON MICROSCOPY | 2.89 |
| 7VIG | ELECTRON MICROSCOPY | 2.89 |
| 9VO1 | ELECTRON MICROSCOPY | 2.97 |
| 7EVY | ELECTRON MICROSCOPY | 2.98 |
| 7VIH | ELECTRON MICROSCOPY | 2.98 |
| 7TD3 | ELECTRON MICROSCOPY | 3 |
| 7EVZ | ELECTRON MICROSCOPY | 3.07 |
| 8G94 | ELECTRON MICROSCOPY | 3.15 |
| 7EW7 | ELECTRON MICROSCOPY | 3.27 |
| 3V2W | X-RAY DIFFRACTION | 3.35 |
| 7WF7 | ELECTRON MICROSCOPY | 3.4 |
| 7EW0 | ELECTRON MICROSCOPY | 3.42 |
| 8YIC | ELECTRON MICROSCOPY | 3.47 |
| 9VNY | ELECTRON MICROSCOPY | 3.69 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P21453-F1 | 81.51 | 0.54 |
Antibody-complex structures (SAbDab): 12 — 7EO2, 7EO4, 7EVY, 7EVZ, 7EW0, 7EW7, 7VIE, 7VIF, 7VIG, 7VIH, 7WF7, 8G94
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (2): 120–121; 265–269
Post-translational modifications (5): 10, 236, 351, 353, 328
Disulfide bonds (2): 184–191, 282–287
Glycosylation sites (2): 30, 36
Mutagenesis-validated functional residues (10):
| Position | Phenotype |
|---|---|
| 120 | drastically reduced affinity for sphingosine 1-phosphate. |
| 121 | drastically reduced affinity for sphingosine 1-phosphate. |
| 121 | slight activation of the receptor at maximal ligand concentration. |
| 169 | strongly reduced interaction with cd69. |
| 180 | strongly reduced interaction with cd69. |
| 210 | impairs sphingosine 1-phosphate binding and signaling. |
| 236 | acts as a dominant negative gpcr and inhibits s1p-induced rac activation, chemotaxis, and angiogenesis. |
| 265 | impairs sphingosine 1-phosphate binding and signaling. |
| 269 | impairs sphingosine 1-phosphate binding and signaling. |
| 292 | drastically reduced affinity for sphingosine 1-phosphate. |
Function
Pathways and Gene Ontology
Reactome pathways
14 pathways
| ID | Pathway |
|---|---|
| R-HSA-419408 | Lysosphingolipid and LPA receptors |
| R-HSA-6785807 | Interleukin-4 and Interleukin-13 signaling |
| R-HSA-9679191 | Potential therapeutics for SARS |
| R-HSA-1280215 | Cytokine Signaling in Immune system |
| R-HSA-162582 | Signal Transduction |
| R-HSA-1643685 | Disease |
| R-HSA-168256 | Immune System |
| R-HSA-372790 | Signaling by GPCR |
| R-HSA-373076 | Class A/1 (Rhodopsin-like receptors) |
| R-HSA-449147 | Signaling by Interleukins |
| R-HSA-500792 | GPCR ligand binding |
| R-HSA-5663205 | Infectious disease |
| R-HSA-9679506 | SARS-CoV Infections |
| R-HSA-9824446 | Viral Infection Pathways |
MSigDB gene sets: 514 (showing top):
RNGTGGGC_UNKNOWN, GOBP_EPITHELIUM_DEVELOPMENT, PID_S1P_S1P1_PATHWAY, BROWNE_HCMV_INFECTION_6HR_DN, GOBP_ACTIN_FILAMENT_BUNDLE_ORGANIZATION, GOBP_MUSCLE_TISSUE_DEVELOPMENT, GOBP_CELL_CHEMOTAXIS, GOBP_HEART_TRABECULA_MORPHOGENESIS, BIOCARTA_EDG1_PATHWAY, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, LFA1_Q6, GOBP_SPHINGOLIPID_MEDIATED_SIGNALING_PATHWAY, AREB6_03, GOBP_GROWTH, GOCC_CELL_SURFACE
GO Biological Process (31): angiogenesis (GO:0001525), blood vessel maturation (GO:0001955), cardiac muscle tissue growth involved in heart morphogenesis (GO:0003245), sphingosine-1-phosphate receptor signaling pathway (GO:0003376), chemotaxis (GO:0006935), cell adhesion (GO:0007155), G protein-coupled receptor signaling pathway (GO:0007186), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (GO:0007193), phospholipase C-activating G protein-coupled receptor signaling pathway (GO:0007200), brain development (GO:0007420), cell population proliferation (GO:0008283), cell migration (GO:0016477), transmission of nerve impulse (GO:0019226), lamellipodium assembly (GO:0030032), actin cytoskeleton organization (GO:0030036), regulation of cell adhesion (GO:0030155), neuron differentiation (GO:0030182), positive regulation of cell migration (GO:0030335), regulation of bone mineralization (GO:0030500), leukocyte chemotaxis (GO:0030595), regulation of bone resorption (GO:0045124), endothelial cell differentiation (GO:0045446), positive regulation of transcription by RNA polymerase II (GO:0045944), positive regulation of smooth muscle cell proliferation (GO:0048661), positive regulation of positive chemotaxis (GO:0050927), negative regulation of stress fiber assembly (GO:0051497), heart trabecula morphogenesis (GO:0061384), T cell migration (GO:0072678), signal transduction (GO:0007165), positive regulation of cell population proliferation (GO:0008284)
GO Molecular Function (5): G protein-coupled receptor binding (GO:0001664), G protein-coupled receptor activity (GO:0004930), sphingosine-1-phosphate receptor activity (GO:0038036), sphingolipid binding (GO:0046625), protein binding (GO:0005515)
GO Cellular Component (8): nucleoplasm (GO:0005654), cytoplasm (GO:0005737), endosome (GO:0005768), plasma membrane (GO:0005886), external side of plasma membrane (GO:0009897), membrane raft (GO:0045121), presynapse (GO:0098793), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-11 pathways:
| Category | Pathways |
|---|---|
| Class A/1 (Rhodopsin-like receptors) | 1 |
| Signaling by Interleukins | 1 |
| SARS-CoV Infections | 1 |
| Immune System | 1 |
| Signal Transduction | 1 |
| GPCR ligand binding | 1 |
| Cytokine Signaling in Immune system | 1 |
| Signaling by GPCR | 1 |
| Disease | 1 |
| Viral Infection Pathways | 1 |
| Infectious disease | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| G protein-coupled receptor signaling pathway | 3 |
| cellular process | 2 |
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 2 |
| blood vessel morphogenesis | 1 |
| anatomical structure formation involved in morphogenesis | 1 |
| blood vessel development | 1 |
| anatomical structure maturation | 1 |
| heart morphogenesis | 1 |
| growth involved in heart morphogenesis | 1 |
| cardiac muscle tissue morphogenesis | 1 |
| cardiac muscle tissue growth | 1 |
| sphingolipid mediated signaling pathway | 1 |
| response to chemical | 1 |
| taxis | 1 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| adenylate cyclase activator activity | 1 |
| adenylate cyclase inhibitor activity | 1 |
| phospholipase C activator activity | 1 |
| central nervous system development | 1 |
| animal organ development | 1 |
| head development | 1 |
| cell motility | 1 |
| action potential | 1 |
| cell communication | 1 |
| chemical synaptic transmission | 1 |
| nervous system process | 1 |
| lamellipodium organization | 1 |
| plasma membrane bounded cell projection assembly | 1 |
| cytoskeleton organization | 1 |
| actin filament-based process | 1 |
| cell adhesion | 1 |
| regulation of cellular process | 1 |
| cell differentiation | 1 |
| generation of neurons | 1 |
| cell migration | 1 |
| regulation of cell migration | 1 |
| positive regulation of cell motility | 1 |
| regulation of ossification | 1 |
Protein interactions and networks
STRING
1903 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| S1PR1 | CD69 | Q07108 | 993 |
| S1PR1 | SPHK1 | Q9NYA1 | 918 |
| S1PR1 | SPHK2 | Q9NRA0 | 870 |
| S1PR1 | KLF2 | Q9Y5W3 | 822 |
| S1PR1 | SELL | P14151 | 801 |
| S1PR1 | F2RL1 | P55085 | 786 |
| S1PR1 | ACER2 | Q5QJU3 | 717 |
| S1PR1 | PROCR | Q9UNN8 | 714 |
| S1PR1 | CXCR5 | P32302 | 698 |
| S1PR1 | CCR7 | P32248 | 692 |
| S1PR1 | CXCR4 | P30991 | 688 |
| S1PR1 | ARRB2 | P32121 | 682 |
| S1PR1 | CXCR3 | P49682 | 651 |
| S1PR1 | STAT3 | P40763 | 640 |
| S1PR1 | IL6 | P05231 | 631 |
IntAct
20 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TRDN | TMEM223 | psi-mi:“MI:0914”(association) | 0.640 |
| CD69 | S1PR1 | psi-mi:“MI:0915”(physical association) | 0.520 |
| S1PR1 | RAMP1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP2 | S1PR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP3 | S1PR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| S1PR1 | RAMP3 | psi-mi:“MI:0915”(physical association) | 0.400 |
| CMSS1 | S1PR1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| CLEC2D | TMEM120B | psi-mi:“MI:0914”(association) | 0.350 |
| S1PR1 | POTEF | psi-mi:“MI:0914”(association) | 0.350 |
| S1PR1 | STXBP3 | psi-mi:“MI:0914”(association) | 0.350 |
| S1PR1 | TNPO2 | psi-mi:“MI:0914”(association) | 0.350 |
| S1PR1 | ISLR | psi-mi:“MI:0914”(association) | 0.350 |
| SCN3B | NBAS | psi-mi:“MI:0914”(association) | 0.350 |
| S1PR1 | S1PR2 | psi-mi:“MI:2364”(proximity) | 0.270 |
| SP1 | S1PR1 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (123): S1PR1 (Reconstituted Complex), ACP2 (Affinity Capture-MS), ATP2B3 (Affinity Capture-MS), HK3 (Affinity Capture-MS), SRC (Affinity Capture-MS), GOLPH3L (Affinity Capture-MS), GNAQ (Affinity Capture-MS), ATP12A (Affinity Capture-MS), CD47 (Affinity Capture-MS), ARL10 (Affinity Capture-MS), GNG5 (Affinity Capture-MS), HRAS (Affinity Capture-MS), S1PR1 (Affinity Capture-MS), RAP2A (Affinity Capture-MS), LMBR1 (Affinity Capture-MS)
ESM2 similar proteins: A0A2R9YJI3, B2ZHY2, B4XF06, D4A3U0, O02777, O08530, O43194, O46635, P06199, P14842, P17200, P18599, P20272, P21453, P21554, P28223, P30372, P30544, P32240, P34979, P35363, P43114, P47746, P47936, P48303, P50128, P50129, P56971, Q333S9, Q5E9P3, Q5IS73, Q5U431, Q60F97, Q71SP5, Q75Z89, Q801M1, Q8BZL4, Q91178, Q91559, Q98894
Diamond homologs: O02777, O08530, O77408, O77621, O95136, P20272, P21453, P21554, P30546, P30966, P31389, P31390, P34972, P35367, P47746, P47752, P47936, P48303, P52592, P56971, P70174, Q17232, Q28928, Q333S9, Q5E9P3, Q5IS73, Q71SP5, Q7JQF1, Q801M1, Q90WY5, Q98894, Q98895, Q9DDK4, Q9H228, Q9I8K8, Q9N2B0, Q9N2B1, Q9N2B2, Q9PUI7, Q9PUQ8
SIGNOR signaling
11 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| AKT | “up-regulates activity” | S1PR1 | phosphorylation |
| “sphingosine 1-phosphate” | up-regulates | S1PR1 | “chemical activation” |
| fingolimod | down-regulates | S1PR1 | “chemical inhibition” |
| AKT1 | “up-regulates activity” | S1PR1 | phosphorylation |
| S1PR1 | “up-regulates activity” | GNAI1 | binding |
| S1PR1 | “up-regulates activity” | GNAI3 | binding |
| S1PR1 | “up-regulates activity” | GNAO1 | binding |
| S1PR1 | “up-regulates activity” | GNAZ | binding |
| “sphingosine 1-phosphate(1-)” | “up-regulates activity” | S1PR1 | “chemical activation” |
| ZDHHC5 | “up-regulates activity” | S1PR1 | palmitoylation |
| S1PR1 | up-regulates | GNAI1 |
Disease & clinical
Cancer significance
Clinical variants and AI predictions
ClinVar
28 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 24 |
| Likely benign | 0 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
277 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:101237095:GCGAG:G | donor_gain | 1.0000 |
| 1:101237097:GAGG:G | donor_loss | 1.0000 |
| 1:101237098:AGGTA:A | donor_loss | 1.0000 |
| 1:101237101:T:G | donor_loss | 1.0000 |
| 1:101238819:A:AG | acceptor_gain | 0.9900 |
| 1:101238820:A:G | acceptor_gain | 0.9900 |
| 1:101238821:G:GG | acceptor_gain | 0.9900 |
| 1:101238817:TTAA:T | acceptor_loss | 0.9800 |
| 1:101238819:AAG:A | acceptor_gain | 0.9800 |
| 1:101238821:G:A | acceptor_gain | 0.9800 |
| 1:101238821:GG:G | acceptor_loss | 0.9800 |
| 1:101238821:GGCT:G | acceptor_gain | 0.9800 |
| 1:101236992:G:GG | donor_gain | 0.9700 |
| 1:101237097:GAG:G | donor_gain | 0.9700 |
| 1:101237766:G:GG | donor_gain | 0.9700 |
| 1:101238809:T:A | acceptor_gain | 0.9600 |
| 1:101238820:AG:A | acceptor_gain | 0.9600 |
| 1:101237100:G:GG | donor_gain | 0.9300 |
| 1:101237753:G:GT | donor_gain | 0.9300 |
| 1:101237097:G:GT | donor_gain | 0.9200 |
| 1:101237676:TAG:T | acceptor_gain | 0.9200 |
| 1:101238814:T:A | acceptor_gain | 0.9100 |
| 1:101238820:AGGCT:A | acceptor_gain | 0.9100 |
| 1:101238821:GGCTG:G | acceptor_gain | 0.9100 |
| 1:101237678:G:T | acceptor_gain | 0.9000 |
| 1:101238821:GGC:G | acceptor_gain | 0.8900 |
| 1:101236990:GA:G | donor_gain | 0.8800 |
| 1:101238809:T:TA | acceptor_loss | 0.8800 |
| 1:101238824:T:A | acceptor_gain | 0.8700 |
| 1:101237677:AG:A | acceptor_gain | 0.8600 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000325160 (1:101238370 A>G), RS1000648737 (1:101237667 G>A), RS1000676695 (1:101237908 A>G), RS1001562306 (1:101238277 G>A,T), RS1001601173 (1:101237142 C>G,T), RS1001932612 (1:101238053 G>A,C,T), RS1001945715 (1:101237328 CT>C), RS1002036833 (1:101241987 T>C), RS1002333486 (1:101236052 C>A,T), RS1003729307 (1:101240585 C>T), RS1003907675 (1:101236536 G>C), RS1004546362 (1:101237239 C>A,T), RS1004563521 (1:101242503 C>CA), RS1004598569 (1:101237004 G>C), RS1005211950 (1:101240606 T>A)
Disease associations
OMIM: gene MIM:601974 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
15 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST004627_123 | Lymphocyte count | 3.000000e-10 |
| GCST004627_124 | Lymphocyte count | 3.000000e-15 |
| GCST004627_125 | Lymphocyte count | 2.000000e-19 |
| GCST005997_7 | Lymphocyte count | 3.000000e-32 |
| GCST006535_2 | Irritable bowel syndrome | 3.000000e-06 |
| GCST007121_2 | Multiple sclerosis and C-reactive protein levels (pleiotropy) | 3.000000e-06 |
| GCST007124_1 | Multiple sclerosis and HDL levels (pleiotropy) | 4.000000e-06 |
| GCST009310_30 | Sensorimotor dexterity | 4.000000e-07 |
| GCST010732_1 | Sensory peripheral neuropathy in microtubule targeting agent-treated breast cancer | 4.000000e-07 |
| GCST90002388_615 | Lymphocyte count | 2.000000e-10 |
| GCST90002388_616 | Lymphocyte count | 2.000000e-17 |
| GCST90002388_617 | Lymphocyte count | 2.000000e-12 |
| GCST90002388_618 | Lymphocyte count | 9.000000e-21 |
| GCST90002389_63 | Lymphocyte percentage of white cells | 3.000000e-14 |
| GCST90002389_64 | Lymphocyte percentage of white cells | 6.000000e-17 |
EFO canonical traits (6, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004587 | lymphocyte count |
| EFO:0004458 | C-reactive protein measurement |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0008354 | cognitive function measurement |
| EFO:0005260 | response to antimicrotubule agent |
| EFO:0007993 | lymphocyte percentage of leukocytes |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL2363041 (PROTEIN FAMILY), CHEMBL4333 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
13 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 27,325 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1096146 | PONESIMOD | 4 | 672 |
| CHEMBL2336071 | SIPONIMOD | 4 | 1,508 |
| CHEMBL314854 | FINGOLIMOD | 4 | 16,015 |
| CHEMBL3358920 | ETRASIMOD | 4 | 817 |
| CHEMBL3707247 | OZANIMOD | 4 | 1,588 |
| CHEMBL544665 | FINGOLIMOD HYDROCHLORIDE | 4 | 1,671 |
| CHEMBL4297505 | CENERIMOD | 3 | 244 |
| CHEMBL3707375 | AMISELIMOD | 2 | 399 |
| CHEMBL405355 | NIGULDIPINE | 2 | 1,802 |
| CHEMBL4097139 | ICANBELIMOD | 2 | 41 |
| CHEMBL46874 | PINAFIDE | 2 | 2,444 |
| CHEMBL4297350 | ASP-4058 | 1 | 24 |
| CHEMBL4297542 | GSK-2018682 | 1 | 100 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Lysophospholipid (S1P) receptors
Most potent curated ligand interactions (35 total), top 25:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| RP-001 | Agonist | 11.05 | pEC50 |
| amiselimod phosphate | Agonist | 10.12 | pEC50 |
| siponimod | Agonist | 10.11 | pEC50 |
| RP-101075 | Agonist | 9.57 | pEC50 |
| fingolimod-phosphate | Agonist | 9.5 | pEC50 |
| ozanimod | Agonist | 9.48 | pEC50 |
| NIBR-0213 | Antagonist | 9.43 | pKd |
| sphingosine 1-phosphate | Agonist | 9.41 | pKd |
| etrasimod | Agonist | 9.24 | pEC50 |
| BMS-986166 | Partial agonist | 9.22 | pEC50 |
| compound 26 [PMID: 16190743] | Agonist | 9.22 | pIC50 |
| mocravimod-phosphate | Agonist | 9.07 | pEC50 |
| cenerimod | Agonist | 9.0 | pEC50 |
| AUY954 | Agonist | 8.92 | pEC50 |
| CYM5442 | Agonist | 8.91 | pEC50 |
| AFD(R) | Agonist | 8.8 | pEC50 |
| compound 43 [PMID: 26751273] | Agonist | 8.8 | pEC50 |
| BMS-986104 derivative 12 | Biased agonist | 8.68 | pEC50 |
| BMS-986104 derivative 24 | Biased agonist | 8.68 | pEC50 |
| CYM5181 | Agonist | 8.47 | pEC50 |
| ASP4058 | Agonist | 8.13 | pIC50 |
| ponesimod | Agonist | 8.04 | pEC50 |
| icanbelimod | Agonist | 8.01 | pEC50 |
| SAR247799 | Biased agonist | 7.9 | pEC50 |
| VPC23019 | Antagonist | 7.86 | pKi |
Binding affinities (BindingDB)
1428 measured of 1692 human assays (1705 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| (E)-3-amino-2-[2-[[5-[(4-chlorobenzyl)thio]-1,3,4-thiadiazol-2-yl]thio]acetyl]but-2-enenitrile | EC50 | 0.00314 nM | |
| 1-Phenylbenzimidazole deriv. 76 | EC50 | 0.00399 nM | |
| 3-(4-ethoxy-3-methoxy-phenyl)-5-(3-pyridyl)-1,2,4-oxadiazole | EC50 | 0.0571 nM | |
| 3-(3-methyl-4-{5-[4-(propan-2-yloxy)-3-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-3-yl}phenyl)propanoic acid | EC50 | 0.08 nM | |
| 3-(4-{5-[3-cyano-4-(propan-2-yloxy)phenyl]-1,2,4-oxadiazol-3-yl}-3-methylphenyl)propanoic acid | EC50 | 0.08 nM | |
| 3-[[5-chloro-2-[[(1R)-1-(4-chloro-3-methylphenyl)propyl]amino]-4-pyridinyl]methylamino]propanoic acid | IC50 | 0.1 nM | US-8791100: Aryl benzylamine compounds |
| 1-[[5-[[(1S)-1-(4-chloro-3-methylphenyl)-2,2,2-trifluoroethyl]amino]-2-methylphenyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.1 nM | US-8791100: Aryl benzylamine compounds |
| 1-[[5-[[(1S)-1-(4-chloro-3-methylphenyl)-2,2,2-trifluoroethyl]amino]-2-fluorophenyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.1 nM | US-8791100: Aryl benzylamine compounds |
| 1-[[4-[5-[1-cyclohexyl-5-(2-methoxyethyl)pyrazol-4-yl]-1,2,4-oxadiazol-3-yl]phenyl]methyl]azetidine-3-carboxylic acid | KI | 0.1 nM | US-8802663: Pyrazole oxadiazole derivatives as S1P1 agonists |
| N-[(2S)-3-[2-ethyl-6-methyl-4-[5-[2-methyl-6-(2-methylpropyl)-4-pyridinyl]-1,2,4-oxadiazol-3-yl]phenoxy]-2-hydroxypropyl]-2-hydroxyacetamide | EC50 | 0.1 nM | US-9617250: Pyridin-4-yl derivatives |
| N-[(2S)-3-[4-[5-(2-cyclopentyl-4-pyridinyl)-1,2,4-oxadiazol-3-yl]-2-ethyl-6-methylphenoxy]-2-hydroxypropyl]-2-hydroxyacetamide | EC50 | 0.1 nM | US-9617250: Pyridin-4-yl derivatives |
| N-[(2S)-3-[2-ethyl-6-methyl-4-[5-(2-pentan-3-yl-4-pyridinyl)-1,2,4-oxadiazol-3-yl]phenoxy]-2-hydroxypropyl]-2-hydroxyacetamide | EC50 | 0.1 nM | US-9617250: Pyridin-4-yl derivatives |
| methyl 2-[7-[[4-cyclopentyl-3-(trifluoromethyl)phenyl]methoxy]-1,2,3,4-tetrahydrocyclopenta[b]indol-3-yl]acetate | EC50 | 0.102 nM | US-9175320: Processes for the preparation of (R)-2-(7-4-cyclopentyl-3-(trifluoromethyl)benzyloxy)-1,2,3,4-tetrahydrocyclopenta[B]indol-3-yl)acetic acid and salts thereof |
| (2S)-3-[4-[5-[2-[1-(4-fluorophenyl)cyclohexyl]ethyl]-1,2,4-oxadiazol-3-yl]-2,6-dimethylphenoxy]propane-1,2-diol | IC50 | 0.12 nM | US-8822510: Substituted 3-phenyl-1,2,4-Oxadiazole compounds |
| 3-(3-methyl-4-{5-[4-(propan-2-yloxy)-3-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-3-yl}phenyl)butanoic acid | EC50 | 0.12 nM | |
| 1-[[5-[1-(4-chloro-3-methylphenyl)propylamino]-2-methylphenyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.2 nM | US-8791100: Aryl benzylamine compounds |
| 1-[[2-chloro-5-[[(1S)-1-(4-chloro-3-methylphenyl)-2,2,2-trifluoroethyl]amino]phenyl]methyl]-3-methylazetidine-3-carboxylic acid | IC50 | 0.2 nM | US-8791100: Aryl benzylamine compounds |
| BDBM50165434 | EC50 | 0.2 nM | US-9617250: Pyridin-4-yl derivatives |
| N-[(2S)-3-[4-[5-(2-cyclopentyl-6-methyl-4-pyridinyl)-1,2,4-oxadiazol-3-yl]-2-ethyl-6-methylphenoxy]-2-hydroxypropyl]-2-hydroxyacetamide | EC50 | 0.2 nM | US-9617250: Pyridin-4-yl derivatives |
| N-[(2S)-3-[2-ethyl-6-methyl-4-[5-[2-(2-methylpropyl)-4-pyridinyl]-1,2,4-oxadiazol-3-yl]phenoxy]-2-hydroxypropyl]-2-hydroxyacetamide | EC50 | 0.2 nM | US-9617250: Pyridin-4-yl derivatives |
| 1-[[4-[5-[2-[1-(4-fluorophenyl)cyclohexyl]ethyl]-1,2,4-oxadiazol-3-yl]phenyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.21 nM | US-8822510: Substituted 3-phenyl-1,2,4-Oxadiazole compounds |
| (1S,2S)-2-(3-methyl-4-{5-[4-(propan-2-yloxy)-3-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-3-yl}phenyl)cyclopropane-1-carboxylic acid | EC50 | 0.21 nM | |
| 3-[7-[5-[3-(methoxymethyl)-4-(2-methylphenyl)phenyl]-1,2,4-oxadiazol-3-yl]-3,4-dihydro-1H-isoquinolin-2-yl]propanoic acid | KI | 0.23 nM | US-8741923: Oxadiazole fused heterocyclic derivatives useful for the treatment of multiple sclerosis |
| 3-[[2-hydroxy-2-[4-[5-[3-phenyl-4-(trifluoromethyl)-1,2-oxazol-5-yl]-1,2,4-oxadiazol-3-yl]phenyl]acetyl]amino]-N,N-dimethylpropanamide | IC50 | 0.3 nM | US-8835470: Mandelamide heterocyclic compounds |
| 2-methyl-3-(3-methyl-4-{5-[4-(propan-2-yloxy)-3-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-3-yl}phenyl)propanoic acid | EC50 | 0.3 nM | |
| N-[(2S)-3-[2-ethyl-4-[5-(2-ethyl-6-methyl-4-pyridinyl)-1,2,4-oxadiazol-3-yl]-6-methylphenoxy]-2-hydroxypropyl]-2-hydroxyacetamide | EC50 | 0.3 nM | US-9617250: Pyridin-4-yl derivatives |
| N-[(2S)-3-[2-ethyl-6-methyl-4-[5-(2-propan-2-yl-4-pyridinyl)-1,2,4-oxadiazol-3-yl]phenoxy]-2-hydroxypropyl]-2-hydroxyacetamide | EC50 | 0.3 nM | US-9617250: Pyridin-4-yl derivatives |
| 1-[[4-[5-[[1-(4-fluorophenyl)cyclohexyl]methoxymethyl]-1,2,4-oxadiazol-3-yl]phenyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.31 nM | US-8822510: Substituted 3-phenyl-1,2,4-Oxadiazole compounds |
| 1-[[3-[3-phenyl-4-(trifluoromethyl)-1,2-oxazol-5-yl]-4H-chromeno[4,3-c][1,2]oxazol-7-yl]methyl]azetidine-3-carboxylic acid | EC50 | 0.32 nM | US-9216972: Tricyclic heterocyclic compounds |
| 1-[[3-[1-(4-chloro-3-methylphenyl)propylamino]-5-methylphenyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.4 nM | US-8791100: Aryl benzylamine compounds |
| (3R)-1-[[2-chloro-5-[[(1S)-1-(4-chloro-3-methylphenyl)-2,2,2-trifluoroethyl]amino]phenyl]methyl]pyrrolidine-3-carboxylic acid | IC50 | 0.4 nM | US-8791100: Aryl benzylamine compounds |
| 3-[[3-[[(1S)-1-(4-chloro-3-methylphenyl)-2,2,2-trifluoroethyl]amino]-2,6-dimethylphenyl]methylamino]propanoic acid | IC50 | 0.4 nM | US-8791100: Aryl benzylamine compounds |
| (3R)-1-[[5-chloro-2-[[(1S)-1-(4-chloro-3-methylphenyl)-2,2,2-trifluoroethyl]amino]-4-pyridinyl]methyl]pyrrolidine-3-carboxylic acid | IC50 | 0.4 nM | US-8791100: Aryl benzylamine compounds |
| [2-amino-7-[5-[4-propan-2-yloxy-3-(trifluoromethyl)phenyl]-1,3,4-oxadiazol-2-yl]-3,4-dihydro-1H-naphthalen-2-yl]methanol | IC50 | 0.4 nM | US-9315492: Heterocyclic group contained amino-methanol derivative, and salt, synthetic method and use thereof |
| [2-amino-7-[5-(3-methyl-4-propan-2-yloxyphenyl)-3H-1,2,4-triazol-3-yl]-3,4-dihydro-1H-naphthalen-2-yl]methanol | IC50 | 0.4 nM | US-9315492: Heterocyclic group contained amino-methanol derivative, and salt, synthetic method and use thereof |
| 1-({4-[5-(4-cyclopentylphenyl)-1,2,4-oxadiazol-3-yl]phenyl}methyl)azetidine-3-carboxylic acid | IC50 | 0.4 nM | |
| 1-[(4-{5-[4-(3,3,3-trifluoropropyl)phenyl]-1,2,4-oxadiazol-3-yl}phenyl)methyl]azetidine-3-carboxylic acid | IC50 | 0.4 nM | |
| N-[(2S)-3-[2-ethyl-6-methyl-4-[5-(2-methyl-6-propyl-4-pyridinyl)-1,2,4-oxadiazol-3-yl]phenoxy]-2-hydroxypropyl]-2-hydroxyacetamide | EC50 | 0.4 nM | US-9617250: Pyridin-4-yl derivatives |
| 3-(5-{5-[3-cyano-4-(propan-2-yloxy)phenyl]-1,2,4-oxadiazol-3-yl}-6-methylpyridin-2-yl)propanoic acid | EC50 | 0.44 nM | |
| (1S,2S)-2-(4-{5-[3-cyano-4-(propan-2-yloxy)phenyl]-1,2,4-oxadiazol-3-yl}-3-methylphenyl)cyclopropane-1-carboxylic acid | EC50 | 0.45 nM | |
| N-(2-hydroxy-2-methylpropyl)-3-[[2-hydroxy-2-[4-[5-[3-phenyl-4-(trifluoromethyl)-1,2-oxazol-5-yl]-1,2,4-oxadiazol-3-yl]phenyl]acetyl]amino]propanamide | IC50 | 0.46 nM | US-8835470: Mandelamide heterocyclic compounds |
| 1-[[4-[5-[3-[1-(4-fluorophenyl)cyclohexyl]propyl]-1,2,4-oxadiazol-3-yl]phenyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.47 nM | US-8822510: Substituted 3-phenyl-1,2,4-Oxadiazole compounds |
| 2-[7-[5-[4-(2-methylphenyl)-3-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-3-yl]-3,4-dihydro-1H-isoquinolin-2-yl]acetic acid | KI | 0.49 nM | US-8741923: Oxadiazole fused heterocyclic derivatives useful for the treatment of multiple sclerosis |
| 1-[1-[3-[[(1R)-1-(4-chloro-3-methylphenyl)propyl]amino]phenyl]ethyl]azetidine-3-carboxylic acid | IC50 | 0.5 nM | US-8791100: Aryl benzylamine compounds |
| (3R)-1-[[5-chloro-2-[[(1R)-1-(4-chloro-3-methylphenyl)propyl]amino]-4-pyridinyl]methyl]pyrrolidine-3-carboxylic acid | IC50 | 0.5 nM | US-8791100: Aryl benzylamine compounds |
| 1-[[4-[5-[3-[1-(4-chlorophenyl)cyclohexyl]propyl]-1,2,4-oxadiazol-3-yl]phenyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.54 nM | US-8822510: Substituted 3-phenyl-1,2,4-Oxadiazole compounds |
| 1-[[3-[5-phenyl-4-(trifluoromethyl)-1,2-oxazol-3-yl]-4,5-dihydrobenzo[g][2,1]benzoxazol-7-yl]methyl]azetidine-3-carboxylic acid | EC50 | 0.59 nM | US-9216972: Tricyclic heterocyclic compounds |
| 3-[7-[5-[4-(2-methylphenyl)-3-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-3-yl]-3,4-dihydro-1H-isoquinolin-2-yl]propanoic acid | KI | 0.6 nM | US-8741923: Oxadiazole fused heterocyclic derivatives useful for the treatment of multiple sclerosis |
| 1-[[3-[[(1R)-1-(4-chloro-3-methylphenyl)propyl]amino]-2,6-dimethylphenyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.6 nM | US-8791100: Aryl benzylamine compounds |
| 1-[[5-chloro-2-[[(1R)-1-(4-chloro-3-methylphenyl)propyl]amino]-4-pyridinyl]methyl]azetidine-3-carboxylic acid | IC50 | 0.6 nM | US-8791100: Aryl benzylamine compounds |
ChEMBL bioactivities
4274 potent at pChembl≥5 of 4427 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 11.00 | EC50 | 0.01 | nM | CHEMBL2032300 |
| 11.00 | IC50 | 0.01 | nM | CHEMBL3403631 |
| 11.00 | IC50 | 0.01 | nM | CHEMBL3806205 |
| 10.92 | EC50 | 0.012 | nM | FTY720-P |
| 10.90 | EC50 | 0.01259 | nM | CHEMBL2018176 |
| 10.85 | IC50 | 0.014 | nM | CHEMBL114606 |
| 10.85 | IC50 | 0.014 | nM | CHEMBL4637401 |
| 10.80 | EC50 | 0.01585 | nM | CHEMBL2059683 |
| 10.80 | IC50 | 0.016 | nM | CHEMBL4752394 |
| 10.74 | EC50 | 0.018 | nM | CHEMBL1093686 |
| 10.70 | EC50 | 0.01995 | nM | CHEMBL2059684 |
| 10.70 | EC50 | 0.02 | nM | CHEMBL114606 |
| 10.70 | EC50 | 0.02 | nM | FTY720-P |
| 10.68 | EC50 | 0.021 | nM | CHEMBL3359523 |
| 10.60 | EC50 | 0.02512 | nM | CHEMBL2032301 |
| 10.60 | EC50 | 0.025 | nM | CHEMBL3359522 |
| 10.57 | EC50 | 0.027 | nM | CHEMBL4093489 |
| 10.57 | EC50 | 0.027 | nM | CHEMBL225155 |
| 10.56 | EC50 | 0.02754 | nM | CHEMBL4093489 |
| 10.52 | EC50 | 0.03 | nM | CHEMBL3403619 |
| 10.52 | EC50 | 0.03 | nM | CHEMBL378436 |
| 10.50 | EC50 | 0.03162 | nM | CHEMBL2018320 |
| 10.50 | EC50 | 0.03162 | nM | CHEMBL2032428 |
| 10.50 | EC50 | 0.03162 | nM | CHEMBL2032430 |
| 10.49 | EC50 | 0.032 | nM | CHEMBL3959509 |
| 10.40 | EC50 | 0.03981 | nM | CHEMBL2011746 |
| 10.40 | EC50 | 0.03981 | nM | CHEMBL2018321 |
| 10.40 | EC50 | 0.04 | nM | ETRASIMOD |
| 10.40 | EC50 | 0.04 | nM | CHEMBL3400910 |
| 10.40 | EC50 | 0.04 | nM | CHEMBL3400909 |
| 10.40 | EC50 | 0.04 | nM | CHEMBL3403630 |
| 10.40 | EC50 | 0.04 | nM | CHEMBL3403631 |
| 10.40 | EC50 | 0.04 | nM | CHEMBL3403632 |
| 10.40 | IC50 | 0.04 | nM | CHEMBL4786296 |
| 10.39 | EC50 | 0.041 | nM | CHEMBL3358955 |
| 10.30 | EC50 | 0.05012 | nM | CHEMBL2018319 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3926787 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3924073 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3896496 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3984513 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3944842 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3926299 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3954097 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3916821 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3970830 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3979740 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3939008 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3940245 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3895822 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL3918031 |
PubChem BioAssay actives
2344 with measured affinity, of 3485 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| [(2S)-2-amino-2-(hydroxymethyl)-4-(4-octylphenyl)butyl] dihydrogen phosphate | 1176592: Agonist activity at human S1P1 receptor assessed as cAMP accumulation by HTRF assay | ec50 | <0.0001 | uM |
| 1-[[6-[(2-methoxy-4-propylphenyl)methoxy]-1-methyl-3,4-dihydronaphthalen-2-yl]methyl]azetidine-3-carboxylic acid | 1477093: Agonist activity at human S1P1 receptor expressed in CHO-K1 cells assessed as inhibition of forskolin-stimulated cAMP accumulation after 30 mins by ELISA | ec50 | <0.0001 | uM |
| [(1R,3S)-1-amino-3-[(6S)-6-[2-(2-methoxyphenyl)ethyl]-5,6,7,8-tetrahydronaphthalen-2-yl]cyclopentyl]methyl dihydrogen phosphate | 1735816: Displacement of [33P]-SIP from human recombinant S1P1 expressed in CHO cell membranes measured after 45 mins by radioligand competitive binding analysis | ic50 | <0.0001 | uM |
| [(1R,3S)-1-amino-3-[(6R)-6-(3-ethoxypropyl)-5,6,7,8-tetrahydronaphthalen-2-yl]cyclopentyl]methyl dihydrogen phosphate | 1730770: Displacement of [33P]-SIP from human recombinant S1P1 expressed in CHO cell membranes measured after 45 mins by TopCount scintillation counting method | ic50 | <0.0001 | uM |
| [(1R,3S)-1-amino-3-[(6R)-6-(5-methoxypentyl)-5,6,7,8-tetrahydronaphthalen-2-yl]cyclopentyl]methyl dihydrogen phosphate | 1730770: Displacement of [33P]-SIP from human recombinant S1P1 expressed in CHO cell membranes measured after 45 mins by TopCount scintillation counting method | ic50 | <0.0001 | uM |
| 3-[4-[5-(3-chloro-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]indol-1-yl]propanoic acid | 662678: Agonist activity at SIP1 receptor by tango assay | ec50 | <0.0001 | uM |
| 3-[4-[5-[3-cyano-4-(1,1,1-trifluoropropan-2-yloxy)phenyl]-1,2,4-oxadiazol-3-yl]-3-methylphenyl]propanoic acid | 268302: Agonist activity at S1P1 receptor expressed in CHO cells measured as S1P-induced [35S]GTP-gamma-S uptake | ec50 | <0.0001 | uM |
| 3-[7-[5-(3-chloro-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-1H-indol-3-yl]propanoic acid | 656694: Agonist activity at S1P1 receptor by Tango assay | ec50 | <0.0001 | uM |
| 3-[7-[5-(3-chloro-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-1-methylindol-3-yl]propanoic acid | 656694: Agonist activity at S1P1 receptor by Tango assay | ec50 | <0.0001 | uM |
| 3-[7-[5-(3-chloro-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-4-fluoro-1-methylindol-3-yl]propanoic acid | 656694: Agonist activity at S1P1 receptor by Tango assay | ec50 | <0.0001 | uM |
| Etrasimod | 1176592: Agonist activity at human S1P1 receptor assessed as cAMP accumulation by HTRF assay | ec50 | <0.0001 | uM |
| 2-[6-[[4-cyclopentyl-3-(trifluoromethyl)phenyl]methoxy]-2,3-dihydro-1H-pyrrolo[1,2-a]indol-3-yl]acetic acid | 1176728: Agonist activity at human S1P1 receptor assessed as cAMP accumulation by HTRF assay | ec50 | <0.0001 | uM |
| [(2R)-2-amino-2-[(2S)-6-octyl-1,2,3,4-tetrahydronaphthalen-2-yl]propyl] dihydrogen phosphate | 473717: Agonist activity at human S1P1 receptor assessed as effect on calcium mobilization by Gi dependent whole cell assay | ec50 | <0.0001 | uM |
| 2-[6-[[4-cyclopentyl-3-(trifluoromethyl)phenyl]methoxy]-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indol-1-yl]acetic acid | 1192396: Agonist activity at human S1P1 receptor assessed as change in cAMP level by homogeneous time resolved fluorescence cyclase assay | ec50 | <0.0001 | uM |
| 2-[6-[(3-cyano-4-propan-2-yloxyphenyl)methoxy]-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indol-1-yl]acetic acid | 1192396: Agonist activity at human S1P1 receptor assessed as change in cAMP level by homogeneous time resolved fluorescence cyclase assay | ec50 | <0.0001 | uM |
| 2-[6-[[4-(2-methylpropyl)-3-(trifluoromethyl)phenyl]methoxy]-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indol-1-yl]acetic acid | 1192396: Agonist activity at human S1P1 receptor assessed as change in cAMP level by homogeneous time resolved fluorescence cyclase assay | ec50 | <0.0001 | uM |
| 2-[10-chloro-8-[[4-cyclopentyl-3-(trifluoromethyl)phenyl]methoxy]-3,4-dihydro-1H-[1,4]oxazino[4,3-a]indol-1-yl]acetic acid | 1192396: Agonist activity at human S1P1 receptor assessed as change in cAMP level by homogeneous time resolved fluorescence cyclase assay | ec50 | <0.0001 | uM |
| 2-[10-chloro-8-[[4-propan-2-yloxy-3-(trifluoromethyl)phenyl]methoxy]-3,4-dihydro-1H-[1,4]oxazino[4,3-a]indol-1-yl]acetic acid | 1192396: Agonist activity at human S1P1 receptor assessed as change in cAMP level by homogeneous time resolved fluorescence cyclase assay | ec50 | <0.0001 | uM |
| 2-[10-chloro-8-[(3-cyano-4-propan-2-yloxyphenyl)methoxy]-3,4-dihydro-1H-[1,4]oxazino[4,3-a]indol-1-yl]acetic acid | 1192396: Agonist activity at human S1P1 receptor assessed as change in cAMP level by homogeneous time resolved fluorescence cyclase assay | ec50 | <0.0001 | uM |
| 3-[[4-[5-(3-cyano-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-2,3-dihydro-1H-inden-1-yl]amino]propanoic acid | 2033333: Modulation of S1PR1 (unknown origin) | ec50 | <0.0001 | uM |
| [(E,2S,3R)-2-amino-3-hydroxyoctadec-4-enyl] dihydrogen phosphate | 473717: Agonist activity at human S1P1 receptor assessed as effect on calcium mobilization by Gi dependent whole cell assay | ec50 | <0.0001 | uM |
| 1-[[3-[3-phenyl-4-(trifluoromethyl)-1,2-oxazol-5-yl]-4,5-dihydrobenzo[g][2,1]benzoxazol-7-yl]methyl]azetidine-3-carboxylic acid | 1686123: Agonist activity at human S1P1 assessed as stimulation of cAMP accumulation | ec50 | <0.0001 | uM |
| 2-[(3R)-4-chloro-6-[[4-propan-2-yloxy-3-(trifluoromethyl)phenyl]methoxy]-2,3-dihydro-1H-pyrrolo[1,2-a]indol-3-yl]acetic acid | 1176728: Agonist activity at human S1P1 receptor assessed as cAMP accumulation by HTRF assay | ec50 | <0.0001 | uM |
| 2-[2-[2-ethyl-3-[5-[4-propan-2-yloxy-3-(trifluoromethyl)phenyl]-1,2,4-thiadiazol-3-yl]phenyl]ethylamino]acetic acid | 672824: Agonist activity against S1P1 receptor by cell based FRET assay | ec50 | <0.0001 | uM |
| 2-[2-[2-ethyl-3-[5-[4-propan-2-yloxy-3-(trifluoromethyl)phenyl]-1,2,4-thiadiazol-3-yl]phenyl]ethyl-methylamino]acetic acid | 672824: Agonist activity against S1P1 receptor by cell based FRET assay | ec50 | <0.0001 | uM |
| 3-[7-[5-(3-chloro-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-5-fluoro-1-methylindol-3-yl]propanoic acid | 656694: Agonist activity at S1P1 receptor by Tango assay | ec50 | <0.0001 | uM |
| 2-[(3R)-4-chloro-6-[(3-cyano-4-propan-2-yloxyphenyl)methoxy]-2,3-dihydro-1H-pyrrolo[1,2-a]indol-3-yl]acetic acid | 1176728: Agonist activity at human S1P1 receptor assessed as cAMP accumulation by HTRF assay | ec50 | <0.0001 | uM |
| 3-[7-[5-(3-chloro-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-1H-indol-3-yl]propanamide | 656694: Agonist activity at S1P1 receptor by Tango assay | ec50 | <0.0001 | uM |
| 3-[2-[2-[4-phenyl-3-(trifluoromethyl)phenyl]-1,3-benzoxazol-5-yl]ethylamino]propanoic acid | 662678: Agonist activity at SIP1 receptor by tango assay | ec50 | <0.0001 | uM |
| 3-[7-[5-(3-chloro-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-1H-indol-3-yl]-N-methylpropanamide | 656694: Agonist activity at S1P1 receptor by Tango assay | ec50 | <0.0001 | uM |
| 2-[3-[2-[4-phenyl-3-(trifluoromethyl)phenyl]-1,3-benzoxazol-5-yl]propylamino]acetic acid | 662678: Agonist activity at SIP1 receptor by tango assay | ec50 | <0.0001 | uM |
| 3-[4-[5-[butyl-[4-(trifluoromethyl)benzoyl]amino]-1,3,4-thiadiazol-2-yl]indol-1-yl]propanoic acid | 652657: Agonist activity at human S1P1 receptor expressed in human U2OS cells assessed as beta-arrestin-mediated receptor internalization by beta-lactamase reporter assay | ec50 | <0.0001 | uM |
| 3-[3-chloro-4-[5-(3-chloro-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]indol-1-yl]propanoic acid | 662678: Agonist activity at SIP1 receptor by tango assay | ec50 | <0.0001 | uM |
| [(1R,3S)-1-amino-3-[(6R)-6-hexyl-5,6,7,8-tetrahydronaphthalen-2-yl]cyclopentyl]methyl dihydrogen phosphate | 1300062: Displacement of 33-P-S1P from from human S1P receptor expressed in CHO cell membranes after 50 mins by scintillation counting | ic50 | <0.0001 | uM |
| [2-amino-2-(hydroxymethyl)-4-(4-octylphenyl)butyl] dihydrogen phosphate | 1300062: Displacement of 33-P-S1P from from human S1P receptor expressed in CHO cell membranes after 50 mins by scintillation counting | ic50 | <0.0001 | uM |
| [(1R,3R)-3-amino-1-hydroxy-5-(4-octylphenyl)pentyl]phosphonic acid | 1474269: Displacement of [33P]-S1P from human S1P1 receptor expressed in CHO cell membranes | ic50 | 0.0001 | uM |
| [(2R)-2-amino-2-(hydroxymethyl)-4-(4-octylphenyl)butyl] dihydrogen phosphate | 466802: Agonist activity at human S1P1 receptor expressed in CHO cells assessed as induction of [S35]GTPgammaS binding | ec50 | 0.0001 | uM |
| 3-[3-methyl-4-[5-[4-propan-2-yloxy-3-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-3-yl]phenyl]butanoic acid | 1798174: Ligand-Induced Uptake of [35S]-GTP-gamma-S from Article 10.1016/j.bmcl.2006.10.057: “SAR studies of 3-arylpropionic acids as potent and selective agonists of sphingosine-1-phosphate receptor-1 (S1P1) with enhanced pharmacokinetic properties.” | ec50 | 0.0001 | uM |
| 3-[4-[5-(3-bromo-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-3-methylphenyl]propanoic acid | 268302: Agonist activity at S1P1 receptor expressed in CHO cells measured as S1P-induced [35S]GTP-gamma-S uptake | ec50 | 0.0001 | uM |
| 3-[4-[5-(3-chloro-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-3-methylphenyl]propanoic acid | 268555: Agonist activity at S1P1 receptor assessed as induction of [35S]GTP-gamma-S binding | ec50 | 0.0001 | uM |
| 1-[[6-[(2-methoxy-4-propylphenyl)methoxy]-1,5-dimethyl-3,4-dihydronaphthalen-2-yl]methyl]azetidine-3-carboxylic acid | 1477093: Agonist activity at human S1P1 receptor expressed in CHO-K1 cells assessed as inhibition of forskolin-stimulated cAMP accumulation after 30 mins by ELISA | ec50 | 0.0001 | uM |
| 3-[4-[5-[5-chloro-6-(1,1,1-trifluoropropan-2-yloxy)-3-pyridinyl]-1,2,4-oxadiazol-3-yl]-3-methylphenyl]propanoic acid | 268302: Agonist activity at S1P1 receptor expressed in CHO cells measured as S1P-induced [35S]GTP-gamma-S uptake | ec50 | 0.0001 | uM |
| 3-[4-[5-(3-cyano-4-propan-2-yloxyphenyl)-1,2,4-oxadiazol-3-yl]-3-methylphenyl]propanoic acid | 1798174: Ligand-Induced Uptake of [35S]-GTP-gamma-S from Article 10.1016/j.bmcl.2006.10.057: “SAR studies of 3-arylpropionic acids as potent and selective agonists of sphingosine-1-phosphate receptor-1 (S1P1) with enhanced pharmacokinetic properties.” | ec50 | 0.0001 | uM |
| 5-[3-[4-[(2R)-2-amino-3-hydroxypropoxy]-2-chloro-5-fluorophenyl]-1,2,4-oxadiazol-5-yl]-2-propan-2-yloxybenzonitrile | 1271835: Agonist activity at human S1P1 receptor expressed in EDG1-bla U2OS cells incubated for 18 hrs prior to GenBlazer substrate addition by beta-arrestin recruitment assay | ec50 | 0.0001 | uM |
| 3-[[2-hydroxy-2-[4-[5-(5-phenyl-4-propyl-1,2-oxazol-3-yl)-1,2,4-oxadiazol-3-yl]phenyl]ethyl]amino]propanoic acid | 1626256: Displacement of [33P]S1P from human S1P1 expressed in CHO cell membranes measured after 45 mins by TopCount method | ic50 | 0.0001 | uM |
| 3-[4-[5-[3-cyano-4-(2,2,2-trifluoroethoxy)phenyl]-1,2,4-oxadiazol-3-yl]-3-methylphenyl]propanoic acid | 268302: Agonist activity at S1P1 receptor expressed in CHO cells measured as S1P-induced [35S]GTP-gamma-S uptake | ec50 | 0.0001 | uM |
| 2-amino-2-[2-[4-heptoxy-3-(trifluoromethyl)phenyl]ethyl]propane-1,3-diol | 2033333: Modulation of S1PR1 (unknown origin) | ec50 | 0.0001 | uM |
| 3-[3-methyl-4-[5-[4-propan-2-yloxy-3-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-3-yl]phenyl]propanoic acid | 1798174: Ligand-Induced Uptake of [35S]-GTP-gamma-S from Article 10.1016/j.bmcl.2006.10.057: “SAR studies of 3-arylpropionic acids as potent and selective agonists of sphingosine-1-phosphate receptor-1 (S1P1) with enhanced pharmacokinetic properties.” | ec50 | 0.0001 | uM |
| [2-amino-3-hydroxy-2-[(2R)-6-octyl-1,2,3,4-tetrahydronaphthalen-2-yl]propyl] dihydrogen phosphate | 473717: Agonist activity at human S1P1 receptor assessed as effect on calcium mobilization by Gi dependent whole cell assay | ec50 | 0.0001 | uM |
| [(2R)-2-amino-2-[(2R)-6-octyl-1,2,3,4-tetrahydronaphthalen-2-yl]propyl] dihydrogen phosphate | 473717: Agonist activity at human S1P1 receptor assessed as effect on calcium mobilization by Gi dependent whole cell assay | ec50 | 0.0001 | uM |
CTD chemical–gene interactions
54 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | increases abundance, affects reaction, increases activity, increases expression, decreases expression (+1 more) | 4 |
| Valproic Acid | decreases expression, increases expression | 4 |
| sphingosine 1-phosphate | affects binding, affects reaction, increases expression | 3 |
| Arsenic | affects expression, increases methylation, affects cotreatment, increases abundance, increases expression | 3 |
| trichostatin A | affects expression, decreases expression, affects cotreatment | 2 |
| nickel sulfate | affects cotreatment, decreases expression | 2 |
| Fingolimod Hydrochloride | decreases reaction, increases expression, affects binding, decreases expression, decreases activity | 2 |
| Benzo(a)pyrene | decreases methylation, increases expression | 2 |
| Aflatoxin B1 | affects expression, decreases expression | 2 |
| triphenyl phosphate | affects expression | 1 |
| kaempferol | decreases expression, decreases reaction | 1 |
| tryptoquivaline | decreases reaction, increases secretion | 1 |
| 2-methyl-4-isothiazolin-3-one | increases expression | 1 |
| terbufos | increases methylation | 1 |
| mono-(2-ethylhexyl)phthalate | increases expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| manganese chloride | increases abundance, increases expression, affects cotreatment | 1 |
| ochratoxin A | decreases expression | 1 |
| butylbenzyl phthalate | increases expression, increases secretion, affects reaction, decreases reaction | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects cotreatment, decreases expression, affects response to substance, increases expression | 1 |
| diallyl trisulfide | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluoro-n-nonanoic acid | decreases expression | 1 |
| macrophage stimulatory lipopeptide 2 | affects cotreatment, decreases expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| entinostat | increases expression | 1 |
| lipopolysaccharide, Escherichia coli O111 B4 | decreases expression, decreases reaction | 1 |
| abrine | decreases expression | 1 |
| FTY 720P | affects binding | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
ChEMBL screening assays
385 unique, capped per target: 194 functional, 191 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1029035 | Binding | Displacement of [33P]sphingosine-1-phosphate from human S1P1 receptor | Synthesis and evaluation of alkoxy-phenylamides and alkoxy-phenylimidazoles as potent sphingosine-1-phosphate receptor subtype-1 agonists. — Bioorg Med Chem Lett |
| CHEMBL1029040 | Functional | Agonist activity at human S1P1 receptor assessed as stimulation of [35S]GTPgammaS binding | Synthesis and evaluation of alkoxy-phenylamides and alkoxy-phenylimidazoles as potent sphingosine-1-phosphate receptor subtype-1 agonists. — Bioorg Med Chem Lett |
Cellosaurus cell lines
16 cell lines: 8 cancer cell line, 3 embryonic stem cell, 3 transformed cell line, 2 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A6D6 | SEES3-1V human S1PR1, clone1 | Embryonic stem cell | Male |
| CVCL_A6D7 | SEES3-1V human S1PR1, clone2 | Embryonic stem cell | Male |
| CVCL_A6D8 | SEES3-1V human S1PR1, clone3 | Embryonic stem cell | Male |
| CVCL_B2EK | Abcam HeLa S1PR1 KO | Cancer cell line | Female |
| CVCL_C0SL | ACTOne EDG1 | Transformed cell line | Female |
| CVCL_D9R6 | Ubigene HEK293 S1PR1 KO | Transformed cell line | Female |
| CVCL_E0N5 | Ubigene HeLa S1PR1 KO | Cancer cell line | Female |
| CVCL_E7C3 | Abcam SK-HEP-1 S1PR1 KO | Cancer cell line | Male |
| CVCL_KV12 | cAMP Hunter CHO-K1 EDG1 Gi | Spontaneously immortalized cell line | Female |
| CVCL_KW92 | PathHunter CHO-K1 EDG1 beta-arrestin | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Targeted by drugs: Cenerimod, Etrasimod, Fingolimod, Ozanimod, Ponesimod, Siponimod
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): irritable bowel syndrome