SALRNA1

Summary

SALRNA1 (senescence associated long non-coding RNA 1, HGNC:49001) is a long non-coding RNA gene on chromosome 14q23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49001
Approved symbol	SALRNA1
Name	senescence associated long non-coding RNA 1
Location	14q23.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	SAL-RNA1, XLOC_023166
Ensembl gene	ENSG00000258952
Ensembl biotype	lncRNA
Entrez	104548971
RNAcentral	URS00007E3633 — lncRNA, 1201 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000555871

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000555871 — 2 exons

Exon	Start	End
ENSE00002453513	60642118	60642589
ENSE00002470872	60639216	60640829

Expression profiles

Bgee: expression breadth broad, 64 present calls, max score 73.34.

Top tissues by expression

64 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skeletal muscle tissue	UBERON:0001134	73.34	gold quality
endometrium	UBERON:0001295	68.54	gold quality
tonsil	UBERON:0002372	68.48	gold quality
hindlimb stylopod muscle	UBERON:0004252	67.07	gold quality
muscle of leg	UBERON:0001383	66.92	gold quality
gastrocnemius	UBERON:0001388	66.45	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	61.34	gold quality
calcaneal tendon	UBERON:0003701	59.17	gold quality
pituitary gland	UBERON:0000007	57.78	gold quality
cortex of kidney	UBERON:0001225	57.44	gold quality
adenohypophysis	UBERON:0002196	56.60	gold quality
endocervix	UBERON:0000458	55.38	gold quality
liver	UBERON:0002107	54.87	gold quality
kidney	UBERON:0002113	54.17	gold quality
stomach	UBERON:0000945	53.61	silver quality
urinary bladder	UBERON:0001255	53.30	gold quality
vagina	UBERON:0000996	52.99	gold quality
multicellular organism	UBERON:0000468	52.44	gold quality
saliva-secreting gland	UBERON:0001044	51.86	gold quality
colon	UBERON:0001155	51.36	gold quality
minor salivary gland	UBERON:0001830	49.63	gold quality
heart left ventricle	UBERON:0002084	48.99	silver quality
prostate gland	UBERON:0002367	48.69	gold quality
blood	UBERON:0000178	48.48	gold quality
adrenal tissue	UBERON:0018303	46.71	silver quality
prefrontal cortex	UBERON:0000451	46.69	silver quality
subcutaneous adipose tissue	UBERON:0002190	46.16	gold quality
placenta	UBERON:0001987	45.96	silver quality
popliteal artery	UBERON:0002250	45.96	gold quality
tibial artery	UBERON:0007610	45.90	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.