SAPCD1-AS1

Summary

SAPCD1-AS1 (SAPCD1 antisense RNA 1, HGNC:39824) is a long non-coding RNA gene on chromosome 6p21.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:39824
Approved symbol	SAPCD1-AS1
Name	SAPCD1 antisense RNA 1
Location	6p21.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235663
Ensembl biotype	lncRNA
Entrez	104413891
RNAcentral	URS00007E48CE — lncRNA, 651 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000419679

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000419679 — 2 exons

Exon	Start	End
ENSE00001743532	31764310	31764720
ENSE00001773485	31765539	31765588

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 87.79.

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.79	gold quality
right uterine tube	UBERON:0001302	86.37	gold quality
pituitary gland	UBERON:0000007	85.97	gold quality
adenohypophysis	UBERON:0002196	84.08	gold quality
hindlimb stylopod muscle	UBERON:0004252	82.98	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.17	gold quality
islet of Langerhans	UBERON:0000006	79.98	gold quality
fallopian tube	UBERON:0003889	77.87	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	76.63	gold quality
ganglionic eminence	UBERON:0004023	75.03	gold quality
right frontal lobe	UBERON:0002810	74.78	gold quality
primary visual cortex	UBERON:0002436	73.97	gold quality
adult mammalian kidney	UBERON:0000082	73.81	gold quality
duodenum	UBERON:0002114	73.28	gold quality
muscle of leg	UBERON:0001383	73.15	gold quality
skeletal muscle tissue	UBERON:0001134	72.97	gold quality
gastrocnemius	UBERON:0001388	72.65	gold quality
myometrium	UBERON:0001296	72.63	gold quality
hypothalamus	UBERON:0001898	72.36	gold quality
metanephros cortex	UBERON:0010533	72.30	gold quality
heart left ventricle	UBERON:0002084	72.24	gold quality
bone marrow	UBERON:0002371	72.22	gold quality
pancreas	UBERON:0001264	72.06	gold quality
frontal cortex	UBERON:0001870	72.01	gold quality
granulocyte	CL:0000094	71.73	gold quality
kidney	UBERON:0002113	71.71	gold quality
right hemisphere of cerebellum	UBERON:0014890	71.53	gold quality
cortical plate	UBERON:0005343	71.45	gold quality
body of uterus	UBERON:0009853	71.37	gold quality
cortex of kidney	UBERON:0001225	71.36	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.90

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.