SASH3
gene geneOn this page
Also known as SLY753P9SH3D6CHACS2
Summary
SASH3 (SAM and SH3 domain containing 3, HGNC:15975) is a protein-coding gene on chromosome Xq26.1, encoding SAM and SH3 domain-containing protein 3 (O75995). May function as a signaling adapter protein in lymphocytes.
The protein encoded by this gene contains a Src homology-3 (SH3) domain and a sterile alpha motif (SAM), both of which are found in proteins involved in cell signaling. This protein may function as a signaling adapter protein in lymphocytes.
Source: NCBI Gene 54440 — RefSeq curated summary.
At a glance
- Gene–disease (curated): combined immunodeficiency, X-linked (Definitive, ClinGen) — +1 more curated relationship
- Clinical variants (ClinVar): 98 total — 3 pathogenic, 1 likely-pathogenic
- Phenotypes (HPO): 34
- MANE Select transcript:
NM_018990
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:15975 |
| Approved symbol | SASH3 |
| Name | SAM and SH3 domain containing 3 |
| Location | Xq26.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | SLY, 753P9, SH3D6C, HACS2 |
| Ensembl gene | ENSG00000122122 |
| Ensembl biotype | protein_coding |
| OMIM | 300441 |
| Entrez | 54440 |
Gene structure
Transcript identifiers
Ensembl transcripts: 2 — 1 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000356892, ENST00000476532
RefSeq mRNA: 1 — MANE Select: NM_018990
NM_018990
CCDS: CCDS14614
Canonical transcript exons
ENST00000356892 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000828145 | 129792989 | 129793139 |
| ENSE00000828146 | 129792627 | 129792836 |
| ENSE00000828147 | 129792328 | 129792476 |
| ENSE00000828148 | 129790940 | 129791081 |
| ENSE00000828149 | 129788431 | 129788577 |
| ENSE00001225888 | 129779949 | 129780154 |
| ENSE00001314211 | 129787975 | 129788070 |
| ENSE00001823721 | 129793642 | 129795201 |
Expression profiles
Bgee: expression breadth ubiquitous, 130 present calls, max score 99.05.
FANTOM5 (CAGE): breadth broad, TPM avg 27.0142 / max 1509.9907, expressed in 554 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 197536 | 23.8352 | 548 |
| 197535 | 3.1790 | 412 |
Top tissues by expression
132 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| granulocyte | CL:0000094 | 99.05 | gold quality |
| lymph node | UBERON:0000029 | 97.82 | gold quality |
| leukocyte | CL:0000738 | 97.79 | gold quality |
| blood | UBERON:0000178 | 97.76 | gold quality |
| monocyte | CL:0000576 | 97.71 | gold quality |
| spleen | UBERON:0002106 | 96.81 | gold quality |
| vermiform appendix | UBERON:0001154 | 96.37 | gold quality |
| bone marrow | UBERON:0002371 | 95.39 | gold quality |
| bone marrow cell | CL:0002092 | 93.74 | gold quality |
| right lung | UBERON:0002167 | 86.26 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 85.40 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 85.37 | gold quality |
| small intestine | UBERON:0002108 | 84.22 | gold quality |
| tonsil | UBERON:0002372 | 82.90 | gold quality |
| lung | UBERON:0002048 | 82.10 | gold quality |
| duodenum | UBERON:0002114 | 82.01 | gold quality |
| gall bladder | UBERON:0002110 | 81.86 | gold quality |
| rectum | UBERON:0001052 | 81.05 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 80.80 | gold quality |
| placenta | UBERON:0001987 | 79.92 | gold quality |
| right coronary artery | UBERON:0001625 | 78.86 | gold quality |
| colonic epithelium | UBERON:0000397 | 77.56 | gold quality |
| omental fat pad | UBERON:0010414 | 77.21 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 76.69 | gold quality |
| adipose tissue | UBERON:0001013 | 76.66 | gold quality |
| right adrenal gland | UBERON:0001233 | 76.36 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 76.24 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 76.17 | gold quality |
| intestine | UBERON:0000160 | 76.13 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 76.10 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 12.35 |
| E-MTAB-6379 | no | 1216.66 |
| E-MTAB-5061 | no | 3.91 |
| E-CURD-112 | no | 2.66 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
57 targeting SASH3, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4283 | 100.00 | 66.42 | 2097 |
| HSA-MIR-4692 | 100.00 | 67.32 | 2066 |
| HSA-MIR-6740-5P | 100.00 | 65.64 | 932 |
| HSA-MIR-4514 | 99.99 | 67.10 | 1870 |
| HSA-MIR-4650-5P | 99.98 | 64.69 | 999 |
| HSA-MIR-7152-3P | 99.97 | 67.47 | 849 |
| HSA-MIR-4725-3P | 99.96 | 69.53 | 2520 |
| HSA-MIR-6780B-5P | 99.96 | 69.60 | 2562 |
| HSA-MIR-6721-5P | 99.93 | 68.92 | 2981 |
| HSA-MIR-4271 | 99.88 | 68.32 | 2244 |
| HSA-MIR-137-3P | 99.87 | 74.74 | 2401 |
| HSA-MIR-4779 | 99.86 | 66.50 | 1583 |
| HSA-MIR-4447 | 99.85 | 67.81 | 2900 |
| HSA-MIR-6892-3P | 99.68 | 66.40 | 1178 |
| HSA-MIR-4499 | 99.62 | 67.29 | 1470 |
| HSA-MIR-12122 | 99.56 | 69.33 | 1672 |
| HSA-MIR-4472 | 99.56 | 66.08 | 1478 |
| HSA-MIR-671-5P | 99.52 | 67.11 | 1277 |
| HSA-MIR-4437 | 99.52 | 65.29 | 1266 |
| HSA-MIR-6081 | 99.48 | 66.07 | 1446 |
| HSA-MIR-6791-5P | 99.16 | 65.92 | 1844 |
| HSA-MIR-4292 | 99.16 | 65.57 | 1767 |
| HSA-MIR-4758-3P | 99.12 | 63.96 | 869 |
| HSA-MIR-4796-3P | 99.08 | 68.38 | 1681 |
| HSA-MIR-452-3P | 99.01 | 66.25 | 1241 |
| HSA-MIR-6770-5P | 98.97 | 66.76 | 1853 |
| HSA-MIR-1245B-5P | 98.88 | 66.55 | 576 |
| HSA-MIR-3142 | 98.88 | 66.09 | 529 |
| HSA-MIR-513B-3P | 98.76 | 68.12 | 1577 |
| HSA-MIR-7155-5P | 98.65 | 66.14 | 1290 |
Literature-anchored findings (GeneRIF, showing 2)
- SASH3 variants cause a novel form of X-linked combined immunodeficiency with immune dysregulation. (PMID:33876203)
- Evans syndrome caused by a deleterious mutation affecting the adaptor protein SASH3. (PMID:37646304)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | sash3 | ENSDARG00000016541 |
| mus_musculus | Sash3 | ENSMUSG00000031101 |
| rattus_norvegicus | Sash3 | ENSRNOG00000004409 |
Paralogs (2): SASH1 (ENSG00000111961), SAMSN1 (ENSG00000155307)
Protein
Protein identifiers
SAM and SH3 domain-containing protein 3 — O75995 (reviewed: O75995)
Alternative names: SH3 protein expressed in lymphocytes homolog
All UniProt accessions (1): O75995
UniProt curated annotations — full annotation on UniProt →
Function. May function as a signaling adapter protein in lymphocytes.
Disease relevance. Immunodeficiency 102 (IMD102) [MIM:301082] An X-linked recessive disorder characterized by recurrent sinopulmonary, cutaneous and mucosal infections, and refractory autoimmune cytopenias that appear in early childhood. Affected individuals have bacterial, viral, and fungal infections, as well as hemolytic anemia, thrombocytopenia, lymphopenia, and decreased NK cells. The disorder may also manifest as a hyperinflammatory state with immune dysregulation. The disease is caused by variants affecting the gene represented in this entry.
RefSeq proteins (1): NP_061863* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001452 | SH3_domain | Domain |
| IPR001660 | SAM | Domain |
| IPR013761 | SAM/pointed_sf | Homologous_superfamily |
| IPR021090 | SPIDER | Domain |
| IPR035721 | SASH3_SH3 | Domain |
| IPR036028 | SH3-like_dom_sf | Homologous_superfamily |
| IPR051725 | SAM-SH3_domain_protein | Family |
Pfam: PF00536, PF07653, PF12485
UniProt features (31 total): modified residue 13, compositionally biased region 5, sequence variant 4, region of interest 4, domain 2, sequence conflict 2, chain 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O75995-F1 | 66.11 | 0.32 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (13): 27, 34, 42, 61, 97, 103, 110, 112, 113, 116, 120, 318, 320
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 405 (showing top):
GSE18804_SPLEEN_MACROPHAGE_VS_COLON_TUMORAL_MACROPHAGE_UP, GOBP_REGULATION_OF_CELL_ACTIVATION, GOBP_REGULATION_OF_LEUKOCYTE_PROLIFERATION, GOBP_POSITIVE_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE, GOBP_REGULATION_OF_ALPHA_BETA_T_CELL_ACTIVATION, MCLACHLAN_DENTAL_CARIES_UP, GOBP_POSITIVE_REGULATION_OF_HEMOPOIESIS, GOBP_B_CELL_ACTIVATION, GOBP_REGULATION_OF_DEVELOPMENTAL_GROWTH, GOBP_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE, GOBP_POSITIVE_REGULATION_OF_CYTOKINE_PRODUCTION_INVOLVED_IN_IMMUNE_RESPONSE, MODULE_45, GOBP_ALPHA_BETA_T_CELL_DIFFERENTIATION, GOBP_GROWTH, GOBP_B_CELL_PROLIFERATION
GO Biological Process (19): B cell homeostasis (GO:0001782), positive regulation of immunoglobulin production (GO:0002639), positive regulation of T cell cytokine production (GO:0002726), positive regulation of adaptive immune response (GO:0002821), positive regulation of B cell proliferation (GO:0030890), positive regulation of type II interferon production (GO:0032729), positive regulation of interleukin-10 production (GO:0032733), positive regulation of interleukin-2 production (GO:0032743), positive regulation of interleukin-4 production (GO:0032753), positive regulation of tumor necrosis factor production (GO:0032760), T cell proliferation (GO:0042098), B cell proliferation (GO:0042100), positive regulation of T cell proliferation (GO:0042102), CD4-positive, alpha-beta T cell differentiation (GO:0043367), positive regulation of CD4-positive, alpha-beta T cell differentiation (GO:0043372), positive regulation of organ growth (GO:0046622), homeostasis of number of cells within a tissue (GO:0048873), regulation of intracellular signal transduction (GO:1902531), positive regulation of lymphocyte activation (GO:0051251)
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (2): nucleus (GO:0005634), cytoplasm (GO:0005737)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| positive regulation of cytokine production | 4 |
| positive regulation of lymphocyte proliferation | 2 |
| lymphocyte proliferation | 2 |
| lymphocyte homeostasis | 1 |
| immunoglobulin production | 1 |
| regulation of immunoglobulin production | 1 |
| positive regulation of production of molecular mediator of immune response | 1 |
| T cell cytokine production | 1 |
| positive regulation of T cell mediated immunity | 1 |
| positive regulation of cytokine production involved in immune response | 1 |
| regulation of T cell cytokine production | 1 |
| adaptive immune response | 1 |
| regulation of adaptive immune response | 1 |
| positive regulation of immune response | 1 |
| regulation of B cell proliferation | 1 |
| B cell proliferation | 1 |
| positive regulation of B cell activation | 1 |
| type II interferon production | 1 |
| regulation of type II interferon production | 1 |
| interleukin-10 production | 1 |
| regulation of interleukin-10 production | 1 |
| interleukin-2 production | 1 |
| regulation of interleukin-2 production | 1 |
| interleukin-4 production | 1 |
| regulation of interleukin-4 production | 1 |
| tumor necrosis factor production | 1 |
| regulation of tumor necrosis factor production | 1 |
| positive regulation of tumor necrosis factor superfamily cytokine production | 1 |
| T cell activation | 1 |
| B cell activation | 1 |
| T cell proliferation | 1 |
| regulation of T cell proliferation | 1 |
| positive regulation of T cell activation | 1 |
| CD4-positive, alpha-beta T cell activation | 1 |
| alpha-beta T cell differentiation | 1 |
| CD4-positive, alpha-beta T cell differentiation | 1 |
| regulation of CD4-positive, alpha-beta T cell differentiation | 1 |
| positive regulation of alpha-beta T cell differentiation | 1 |
| positive regulation of CD4-positive, alpha-beta T cell activation | 1 |
| organ growth | 1 |
Protein interactions and networks
STRING
1300 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| SASH3 | RASAL3 | Q86YV0 | 482 |
| SASH3 | THEMIS2 | Q5TEJ8 | 426 |
| SASH3 | ARHGAP30 | Q7Z6I6 | 414 |
| SASH3 | LAPTM5 | Q13571 | 403 |
| SASH3 | RCSD1 | Q6JBY9 | 394 |
| SASH3 | SNX20 | Q7Z614 | 392 |
| SASH3 | IGSF6 | O95976 | 382 |
| SASH3 | EOLA2 | Q96DE9 | 377 |
| SASH3 | RNF207 | Q6ZRF8 | 373 |
| SASH3 | NCKAP1L | P55160 | 364 |
| SASH3 | CAMSAP3 | Q9P1Y5 | 363 |
| SASH3 | EVI2B | P34910 | 352 |
| SASH3 | OR5D14 | Q8NGL3 | 351 |
| SASH3 | TMC8 | Q8IU68 | 350 |
| SASH3 | ACY3 | Q96HD9 | 348 |
IntAct
4 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| SASH3 | HNRNPC | psi-mi:“MI:0915”(physical association) | 0.400 |
| SASH3 | H2BC21 | psi-mi:“MI:0915”(physical association) | 0.400 |
| SASH3 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (4): HNRNPC (Proximity Label-MS), HIST2H2BE (Proximity Label-MS), SASH3 (Cross-Linking-MS (XL-MS)), APP (Reconstituted Complex)
ESM2 similar proteins: A0JN71, A4IFK0, A5PMU4, A6QQV9, O15034, O15040, O62666, O62674, O62675, O62676, O62677, O62678, O75995, P49796, P52734, P59672, P78314, P97432, P98174, Q06649, Q0V8R5, Q13905, Q14596, Q3U0J8, Q501R9, Q53GL0, Q5BJM5, Q5F3C8, Q5RC94, Q5SUE8, Q6AI12, Q6ZMT1, Q7Z5H3, Q80U40, Q80UZ0, Q80XA6, Q80YS6, Q8BL80, Q8K352, Q8N556
Diamond homologs: A0JN71, O75995, O94885, P57725, P59672, P59808, Q8K352, Q92625, Q9NSI8, Q9XYM0, Q5TGI4, A0A8I3NFE2, A5PMU4, D7PF45, O15357, P0C6S7, P54753, Q09YL6, Q2I6J1, Q61120, Q6P549, Q6P9K8, Q7Z6G8, Q8BIZ1, Q8VHK2, Q8WXD9, Q8WXE0, Q9WVR3
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
98 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 3 |
| Likely pathogenic | 1 |
| Uncertain significance | 44 |
| Likely benign | 5 |
| Benign | 4 |
Top pathogenic / likely-pathogenic (4)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1687734 | NM_018990.4(SASH3):c.1039C>T (p.Arg347Cys) | Pathogenic |
| 1687735 | NM_018990.4(SASH3):c.862C>T (p.Arg288Ter) | Pathogenic |
| 1687736 | NM_018990.4(SASH3):c.733C>T (p.Arg245Ter) | Pathogenic |
| 1687737 | NM_018990.4(SASH3):c.505C>T (p.Gln169Ter) | Likely pathogenic |
SpliceAI
1037 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| X:129780152:AAGG:A | donor_loss | 1.0000 |
| X:129780153:AGGTG:A | donor_loss | 1.0000 |
| X:129780154:GGTG:G | donor_loss | 1.0000 |
| X:129780155:G:GA | donor_loss | 1.0000 |
| X:129787973:A:AG | acceptor_gain | 1.0000 |
| X:129787974:G:GG | acceptor_gain | 1.0000 |
| X:129787974:GCT:G | acceptor_gain | 1.0000 |
| X:129788071:G:GG | donor_gain | 1.0000 |
| X:129788426:CACA:C | acceptor_loss | 1.0000 |
| X:129788427:ACAG:A | acceptor_loss | 1.0000 |
| X:129788428:CAGAT:C | acceptor_loss | 1.0000 |
| X:129788429:A:AG | acceptor_gain | 1.0000 |
| X:129788429:AGAT:A | acceptor_loss | 1.0000 |
| X:129788430:G:GA | acceptor_gain | 1.0000 |
| X:129788535:G:GT | donor_gain | 1.0000 |
| X:129788574:GATG:G | donor_gain | 1.0000 |
| X:129788578:G:GG | donor_gain | 1.0000 |
| X:129788579:T:A | donor_loss | 1.0000 |
| X:129790935:TGCA:T | acceptor_loss | 1.0000 |
| X:129790936:GCA:G | acceptor_loss | 1.0000 |
| X:129790938:A:AG | acceptor_gain | 1.0000 |
| X:129790938:A:C | acceptor_loss | 1.0000 |
| X:129790939:G:GA | acceptor_gain | 1.0000 |
| X:129790939:G:T | acceptor_loss | 1.0000 |
| X:129790939:GGC:G | acceptor_gain | 1.0000 |
| X:129790939:GGCA:G | acceptor_gain | 1.0000 |
| X:129791078:ACAG:A | donor_gain | 1.0000 |
| X:129791079:CAG:C | donor_gain | 1.0000 |
| X:129791080:AG:A | donor_gain | 1.0000 |
| X:129791081:GG:G | donor_gain | 1.0000 |
AlphaMissense
2488 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| X:129792424:T:A | V180D | 1.000 |
| X:129792640:T:A | I202N | 1.000 |
| X:129792640:T:G | I202S | 1.000 |
| X:129792672:T:A | W213R | 1.000 |
| X:129792672:T:C | W213R | 1.000 |
| X:129792678:G:C | G215R | 1.000 |
| X:129792679:G:A | G215D | 1.000 |
| X:129792706:T:C | F224S | 1.000 |
| X:129792708:A:G | K225E | 1.000 |
| X:129792709:A:T | K225I | 1.000 |
| X:129792710:A:C | K225N | 1.000 |
| X:129792710:A:T | K225N | 1.000 |
| X:129792711:T:C | F226L | 1.000 |
| X:129792712:T:C | F226S | 1.000 |
| X:129792713:C:A | F226L | 1.000 |
| X:129792713:C:G | F226L | 1.000 |
| X:129792814:T:C | L260P | 1.000 |
| X:129792817:T:C | L261P | 1.000 |
| X:129793005:T:C | L273P | 1.000 |
| X:129793017:G:T | G277V | 1.000 |
| X:129793019:T:G | Y278D | 1.000 |
| X:129793038:T:C | F284S | 1.000 |
| X:129793062:T:A | L292H | 1.000 |
| X:129793062:T:C | L292P | 1.000 |
| X:129793071:T:C | L295P | 1.000 |
| X:129793104:T:A | L306Q | 1.000 |
| X:129793104:T:C | L306P | 1.000 |
| X:129793107:T:C | L307P | 1.000 |
| X:129793113:C:A | A309D | 1.000 |
| X:129793732:A:C | D348A | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000173066 (X:129791494 C>T), RS1000193463 (X:129778439 G>C), RS1000476432 (X:129794441 A>C), RS1000732400 (X:129785961 G>C,T), RS1000845886 (X:129794737 T>G), RS1000983863 (X:129793683 G>A), RS1001198020 (X:129780059 C>G), RS1001334320 (X:129788416 C>T), RS1001368333 (X:129784099 C>CT), RS1001506122 (X:129795430 C>T), RS1001844551 (X:129794155 C>A,T), RS1002198117 (X:129793233 C>G), RS1002411471 (X:129780449 T>C), RS1002637980 (X:129782775 G>A,C), RS1002762573 (X:129778681 TGAC>T)
Disease associations
OMIM: gene MIM:300441 | disease phenotypes: MIM:301082, MIM:300755
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| immunodeficiency 102 | Definitive | X-linked |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| combined immunodeficiency, X-linked | Definitive | XL |
Mondo (2): immunodeficiency 102 (MONDO:0024781), immunodeficiency disease (MONDO:0021094)
Orphanet (1): X-linked combined immunodeficiency due to SASH3 deficiency (Orphanet:653751)
HPO phenotypes
34 total (30 of 34 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000821 | Hypothyroidism |
| HP:0001419 | X-linked recessive inheritance |
| HP:0001581 | Recurrent skin infections |
| HP:0001882 | Decreased total leukocyte count |
| HP:0001903 | Anemia |
| HP:0001904 | Autoimmune neutropenia |
| HP:0001973 | Autoimmune thrombocytopenia |
| HP:0002110 | Bronchiectasis |
| HP:0002240 | Hepatomegaly |
| HP:0002257 | Chronic rhinitis |
| HP:0002720 | Decreased circulating IgA concentration |
| HP:0002783 | Recurrent lower respiratory tract infections |
| HP:0002788 | Recurrent upper respiratory tract infections |
| HP:0002850 | Decreased circulating total IgM |
| HP:0003581 | Adult onset |
| HP:0004315 | Decreased circulating IgG concentration |
| HP:0010976 | Decreased total B cell count |
| HP:0011108 | Recurrent sinusitis |
| HP:0011109 | Chronic sinusitis |
| HP:0011463 | Childhood onset |
| HP:0011954 | Nodular regenerative hyperplasia of liver |
| HP:0030783 | Increased circulating interleukin 6 concentration |
| HP:0032154 | Aphthous ulcer |
| HP:0032170 | Severe varicella zoster infection |
| HP:0032218 | Decreased CD4+ T cell proportion |
| HP:0034249 | Severe influenza infection |
| HP:0040218 | Reduced total natural killer cell count |
| HP:0100806 | Sepsis |
| HP:0200043 | Verrucae |
| HP:0410301 | Partial absence of specific antibody response to unconjugated pneumococcus vaccine |
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
19 total (human), top 19 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| triphenyl phosphate | affects expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression, affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| clothianidin | increases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Decitabine | increases expression | 1 |
| Air Pollutants, Occupational | affects expression | 1 |
| Benzo(a)pyrene | affects methylation, decreases methylation | 1 |
| Cadmium | decreases expression, increases abundance | 1 |
| Calcitriol | decreases expression | 1 |
| Diuron | decreases expression | 1 |
| Lipopolysaccharides | decreases expression, affects response to substance, increases expression, affects cotreatment | 1 |
| Nickel | increases expression | 1 |
| Tobacco Smoke Pollution | increases expression | 1 |
| Tretinoin | increases expression | 1 |
| Valproic Acid | increases methylation | 1 |
| Vincristine | increases expression | 1 |
| Antirheumatic Agents | decreases expression | 1 |
| Cadmium Chloride | decreases expression, increases abundance | 1 |
Clinical trials (associated diseases)
247 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00001542 | PHASE4 | COMPLETED | Fluconazole Prophylaxis of Thrush in AIDS |
| NCT00144157 | PHASE4 | COMPLETED | Open Label Study of NVP+CBV Treatment in Women Who Have Received sdNVP for the pMTCT of HIV |
| NCT00162643 | PHASE4 | UNKNOWN | PI Vs. NNRTI Based Therapy for HIV Advanced Disease |
| NCT00273988 | PHASE4 | COMPLETED | Pharmacokinetic Study of Interaction Between Nevirapine and Methadone in HIV-1 Infected, Opioid-dependent Adults |
| NCT00981318 | PHASE4 | TERMINATED | Pilot Assessment of Lopinavir/Ritonavir and Maraviroc |
| NCT01086878 | PHASE4 | COMPLETED | Safety of Cotrimoxazole in HIV- and HAART-exposed Infants |
| NCT01090102 | PHASE4 | COMPLETED | Mesalamine to Reduce T Cell Activation in HIV Infection |
| NCT01147042 | PHASE4 | TERMINATED | Biochemical Response to Interferon-Gamma in Subjects With Specific Gene Mutation in Chronic Granulomatous Disease |
| NCT01230580 | PHASE4 | UNKNOWN | Protease Inhibitor Monotherapy Versus Ongoing Triple-therapy in the Long Term Management of HIV Infection (PIVOT) |
| NCT01465958 | PHASE4 | COMPLETED | Pharmacokinetics, Safety, and Tolerability of Subcutaneous GAMUNEX-C in Pediatric Subjects With Primary Immunodeficiency |
| NCT02274662 | PHASE4 | COMPLETED | Expanded Access Protocol Thymus Transplantation |
| NCT02348177 | PHASE4 | COMPLETED | Pharmacokinetics of Lopinavir/Ritonavir Superboosting in Infants and Young Children Co-infected With HIV and TB |
| NCT02396979 | PHASE4 | COMPLETED | Intervention of HIV, Drug Use and the Criminal Justice System in Malaysia |
| NCT02490956 | PHASE4 | UNKNOWN | Diagnostic Immunization With Rabies Vaccine in Patients With PID |
| NCT02503293 | PHASE4 | COMPLETED | A Study to Compare Quality of Life and Satisfaction in Primary Immunodeficient Patients Treated With Subcutaneous Injections of Gammanorm® 165 mg/mL Administered With Two Different Delivery Devices: Injections Using Pump or Rapid Push |
| NCT02881437 | PHASE4 | COMPLETED | IgG Level in Primary Immunodeficiency Switching From Standard SCIG to Every Other Week HyQvia |
| NCT03033745 | PHASE4 | COMPLETED | Safety and Tolerability of Higher Infusion Parameters of IgPro20 (Hizentra) in Subjects With Primary Immunodeficiency (PID) |
| NCT03677557 | PHASE4 | UNKNOWN | Safety, Tolerability, Patient Satisfaction and Cost of 16.5% Subcutaneous Immunoglobulin (Cutaquig®) Treatment |
| NCT04192487 | PHASE4 | COMPLETED | Effects of Crofelemer on the Gut Microbiome in Healthy Volunteers and in HIV+ Patients With Non-Infectious Diarrhea |
| NCT04566692 | PHASE4 | COMPLETED | A Study to Evaluate IGSC 20% Biweekly Dosing in Treatment-Experienced Participants and Loading/Maintenance Dosing in Treatment-Naïve Participants With Primary Immunodeficiency |
| NCT05493969 | PHASE4 | NOT_YET_RECRUITING | Efficacy and Tolerability of DTG Plus 3TC in HIV Infected Adults With Virologically Suppression and TDF Toxicity |
| NCT06576024 | PHASE4 | COMPLETED | Immunogenicity and Safety of Inactivated Hepatitis A Vaccine in HIV-infected People |
| NCT06634641 | PHASE4 | RECRUITING | Clozapine-related Immunodeficiency in Parkinsons Disease |
| NCT07076446 | PHASE4 | ACTIVE_NOT_RECRUITING | An Open-label, Multicenter Study to Assess the Pharmacokinetics (PK), Safety, and Tolerability of Subcutaneous IgPro20 in Immunoglobulin (IG) Treatment-naïve Participants With Primary Immunodeficiency (PID) |
| NCT00000118 | PHASE3 | COMPLETED | Ganciclovir Implant Study for Cytomegalovirus Retinitis |
| NCT00000134 | PHASE3 | COMPLETED | Studies of the Ocular Complications of AIDS (SOCA)–Cytomegalovirus Retinitis Retreatment Trial (CRRT) |
| NCT00000590 | PHASE3 | COMPLETED | Anti-HIV Immunoglobulin (HIVIG) in Prevention of Maternal-Fetal HIV Transmission (Pediatric ACTG Protocol 185) |
| NCT00001267 | PHASE3 | COMPLETED | A Randomized Pilot Study for the Treatment of AIDS or AIDS Related Complex With an Alternating or Simultaneous Combination Regimen of AZT and 2’,3’-Dideoxyinosine |
| NCT00001646 | PHASE3 | COMPLETED | Voriconazole vs. Amphotericin B in the Treatment of Invasive Aspergillosis |
| NCT00144183 | PHASE3 | COMPLETED | A Study of Single Dose Nevirapine (NVP) Combined With Combivir® for the Prevention of Mother to Child Transmission (pMTCT) - Treatment Options Preservation Study (TOPS) |
| NCT00243568 | PHASE3 | WITHDRAWN | Vicriviroc, a CCR5 Inhibitor, Added to an Optimized Antiretroviral Therapy for Previously Treated HIV (VICTOR-E2) (Study P04285 |
| NCT00278954 | PHASE3 | COMPLETED | Efficacy, Safety and Pharmacokinetics of Gammaplex in Primary Immunodeficiency Diseases. |
| NCT00474370 | PHASE3 | COMPLETED | Vicriviroc in HIV-Treatment Experienced Subjects (Study P04889AM8)(COMPLETED) |
| NCT00478231 | PHASE3 | COMPLETED | Multicenter, Safety Study Of Maraviroc |
| NCT00523211 | PHASE3 | COMPLETED | Vicriviroc in HIV-Treatment Experienced Subjects (Study P04405AM5) |
| NCT00698334 | PHASE3 | COMPLETED | Efficacy of Thrice Weekly Directly Observed Treatment, Short-course (DOTS) in HIV-associated Tuberculosis |
| NCT00966160 | PHASE3 | COMPLETED | CD4 Cell Recovery in HIV-1 Patients Comparing 2 Treatment Regimes |
| NCT01363011 | PHASE3 | COMPLETED | Cobicistat-containing Highly Active Antiretroviral Regimens in HIV-1 Infected Patients With Mild to Moderate Renal Impairment |
| NCT01440569 | PHASE3 | COMPLETED | Safety and Efficacy of Cobicistat-boosted Darunavir in HIV Infected Adults |
| NCT01475838 | PHASE3 | COMPLETED | Study to Evaluate Switching From Regimens Consisting of a Ritonavir-boosted Protease Inhibitor Plus Emtricitabine/Tenofovir Fixed-Dose Combination to the Elvitegravir/Cobicistat/Emtricitabine/Tenofovir DF Single-Tablet Regimen in Virologically Suppressed, HIV-1 Infected Patients |
Related Atlas pages
- Associated diseases: immunodeficiency 102, combined immunodeficiency, X-linked
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): immunodeficiency 102, immunodeficiency disease