SCARNA28

Summary

SCARNA28 (small Cajal body-specific RNA 28, HGNC:50388) is a gene on chromosome 7q22.1.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 106633801 — RefSeq curated summary.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50388
Approved symbol	SCARNA28
Name	small Cajal body-specific RNA 28
Location	7q22.1
Locus type	RNA, small nucleolar
Status	Approved
Aliases	ZL1
Entrez	106633801
RNAcentral	URS00008E3964 — ncRNA, 194 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1002289897 (7:98880051 A>G), RS1002405809 (7:98879777 C>T), RS1003312691 (7:98881343 C>A,G,T), RS1007097031 (7:98880869 C>T), RS1007214703 (7:98880653 A>G,T), RS1011109907 (7:98880330 C>G), RS1012119372 (7:98881616 C>T), RS1017231698 (7:98880660 T>C), RS1017347415 (7:98880453 G>A,T), RS1018234651 (7:98882073 T>C), RS1021248285 (7:98880111 C>G,T), RS1022134969 (7:98881620 G>C), RS1022672444 (7:98881409 C>G,T), RS1025080687 (7:98879756 C>A,G,T), RS1026116563 (7:98880748 C>T)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.