SCD-DT

Summary

SCD-DT (SCD divergent transcript, HGNC:58401) is a long non-coding RNA gene on chromosome 10q24.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58401
Approved symbol	SCD-DT
Name	SCD divergent transcript
Location	10q24.31
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-34D15.2
Ensembl gene	ENSG00000231188
Ensembl biotype	lncRNA
Entrez	141725165

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000429420, ENST00000746873, ENST00000775829

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429420 — 4 exons

Exon	Start	End
ENSE00001657032	100335563	100335764
ENSE00001671168	100346288	100346390
ENSE00001692716	100342725	100342832
ENSE00001706839	100336981	100337038

Expression profiles

Bgee: expression breadth broad, 78 present calls, max score 85.35.

Top tissues by expression

78 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.35	silver quality
right testis	UBERON:0004534	74.02	gold quality
left testis	UBERON:0004533	73.55	gold quality
testis	UBERON:0000473	73.19	gold quality
mucosa of transverse colon	UBERON:0004991	57.74	gold quality
corpus callosum	UBERON:0002336	57.68	gold quality
liver	UBERON:0002107	57.35	gold quality
bone marrow	UBERON:0002371	56.24	gold quality
islet of Langerhans	UBERON:0000006	53.52	gold quality
superior frontal gyrus	UBERON:0002661	53.01	gold quality
prefrontal cortex	UBERON:0000451	52.53	gold quality
monocyte	CL:0000576	51.33	silver quality
blood	UBERON:0000178	51.26	gold quality
multicellular organism	UBERON:0000468	50.21	gold quality
muscle of leg	UBERON:0001383	48.81	gold quality
lung	UBERON:0002048	48.36	gold quality
cerebellar hemisphere	UBERON:0002245	48.24	gold quality
gastrocnemius	UBERON:0001388	47.40	gold quality
kidney	UBERON:0002113	46.82	silver quality
endocervix	UBERON:0000458	46.67	gold quality
right lobe of liver	UBERON:0001114	46.39	silver quality
spleen	UBERON:0002106	46.39	gold quality
tibial artery	UBERON:0007610	46.12	silver quality
upper lobe of left lung	UBERON:0008952	45.77	gold quality
smooth muscle tissue	UBERON:0001135	45.35	gold quality
ascending aorta	UBERON:0001496	44.84	gold quality
body of pancreas	UBERON:0001150	44.82	silver quality
rectum	UBERON:0001052	44.77	gold quality
thoracic aorta	UBERON:0001515	44.68	gold quality
adult mammalian kidney	UBERON:0000082	44.63	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.