SCEL-AS1

Summary

SCEL-AS1 (SCEL antisense RNA 1, HGNC:39895) is a long non-coding RNA gene on chromosome 13q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:39895
Approved symbol	SCEL-AS1
Name	SCEL antisense RNA 1
Location	13q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224347
Ensembl biotype	lncRNA
Entrez	104355296
RNAcentral	URS00007E48EF — lncRNA, 570 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000456280, ENST00000457528

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000456280 — 4 exons

Exon	Start	End
ENSE00001597728	77602142	77602250
ENSE00001599248	77606477	77606516
ENSE00001676859	77599797	77600020
ENSE00001680557	77604271	77604390

Expression profiles

Bgee: expression breadth broad, 53 present calls, max score 87.40.

Top tissues by expression

61 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cerebellar vermis	UBERON:0004720	87.40	gold quality
quadriceps femoris	UBERON:0001377	84.23	gold quality
uterine cervix	UBERON:0000002	79.10	gold quality
liver	UBERON:0002107	76.15	silver quality
bone marrow	UBERON:0002371	74.94	silver quality
ectocervix	UBERON:0012249	74.65	gold quality
lower esophagus mucosa	UBERON:0035834	72.62	gold quality
prostate gland	UBERON:0002367	69.26	silver quality
skeletal muscle tissue	UBERON:0001134	67.85	silver quality
kidney	UBERON:0002113	65.44	silver quality
esophagus mucosa	UBERON:0002469	64.42	gold quality
esophagus	UBERON:0001043	64.27	gold quality
vagina	UBERON:0000996	62.76	gold quality
thymus	UBERON:0002370	62.63	silver quality
minor salivary gland	UBERON:0001830	62.55	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.89	gold quality
anterior cingulate cortex	UBERON:0009835	58.89	silver quality
blood	UBERON:0000178	58.42	gold quality
skin of abdomen	UBERON:0001416	58.23	gold quality
zone of skin	UBERON:0000014	57.64	gold quality
skin of leg	UBERON:0001511	56.81	gold quality
tonsil	UBERON:0002372	56.12	gold quality
multicellular organism	UBERON:0000468	54.98	gold quality
monocyte	CL:0000576	54.42	gold quality
left ovary	UBERON:0002119	54.34	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	52.60	gold quality
placenta	UBERON:0001987	51.52	silver quality
subcutaneous adipose tissue	UBERON:0002190	50.96	gold quality
lower esophagus muscularis layer	UBERON:0035833	50.40	gold quality
lung	UBERON:0002048	48.87	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.