SCFD2-AS1

Summary

SCFD2-AS1 (SCFD2 antisense RNA 1, HGNC:58243) is a long non-coding RNA gene on chromosome 4q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58243
Approved symbol	SCFD2-AS1
Name	SCFD2 antisense RNA 1
Location	4q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248115
Ensembl biotype	lncRNA
Entrez	101928658
RNAcentral	URS000049E472 — lncRNA, 2517 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000504048, ENST00000508813, ENST00000510351, ENST00000816177

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000504048 — 2 exons

Exon	Start	End
ENSE00004218655	52945663	52945760
ENSE00004218658	52948280	52948934

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 94.32.

Top tissues by expression

208 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	94.32	gold quality
spleen	UBERON:0002106	85.79	gold quality
right adrenal gland	UBERON:0001233	77.29	gold quality
right adrenal gland cortex	UBERON:0035827	77.09	gold quality
adrenal tissue	UBERON:0018303	75.95	gold quality
adult mammalian kidney	UBERON:0000082	75.90	gold quality
left ovary	UBERON:0002119	74.94	gold quality
adrenal gland	UBERON:0002369	73.32	gold quality
bone marrow cell	CL:0002092	73.31	gold quality
adrenal cortex	UBERON:0001235	72.95	gold quality
left adrenal gland cortex	UBERON:0035825	72.94	gold quality
left adrenal gland	UBERON:0001234	72.68	gold quality
right ovary	UBERON:0002118	70.77	gold quality
kidney	UBERON:0002113	70.35	gold quality
ovary	UBERON:0000992	70.09	gold quality
stromal cell of endometrium	CL:0002255	69.16	gold quality
cortex of kidney	UBERON:0001225	68.81	gold quality
superficial temporal artery	UBERON:0001614	66.55	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.52	gold quality
ganglionic eminence	UBERON:0004023	64.31	gold quality
right atrium auricular region	UBERON:0006631	64.04	gold quality
cardiac atrium	UBERON:0002081	63.55	gold quality
metanephros cortex	UBERON:0010533	62.74	gold quality
lower lobe of lung	UBERON:0008949	62.68	silver quality
prefrontal cortex	UBERON:0000451	62.67	gold quality
tendon of biceps brachii	UBERON:0008188	61.25	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	60.90	gold quality
sural nerve	UBERON:0015488	60.24	silver quality
sperm	CL:0000019	60.18	silver quality
hindlimb stylopod muscle	UBERON:0004252	60.18	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.25

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.