SCTR
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Summary
SCTR (secretin receptor, HGNC:10608) is a protein-coding gene on chromosome 2q14.2, encoding Secretin receptor (P47872). G protein-coupled receptor activated by secretin (SCT), which is involved in different processes such as regulation of the pH of the duodenal content, food intake and water homeostasis.
The protein encoded by this gene is a G protein-coupled receptor and belongs to the glucagon-VIP-secretin receptor family. It binds secretin which is the most potent regulator of pancreatic bicarbonate, electrolyte and volume secretion. Secretin and its receptor are suggested to be involved in pancreatic cancer and autism.
Source: NCBI Gene 6344 — RefSeq curated summary.
At a glance
- GWAS associations: 3
- Clinical variants (ClinVar): 90 total
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_002980
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:10608 |
| Approved symbol | SCTR |
| Name | secretin receptor |
| Location | 2q14.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000080293 |
| Ensembl biotype | protein_coding |
| OMIM | 182098 |
| Entrez | 6344 |
Gene structure
Transcript identifiers
Ensembl transcripts: 12 — 10 protein_coding, 2 retained_intron
ENST00000019103, ENST00000485440, ENST00000494326, ENST00000627145, ENST00000630739, ENST00000903273, ENST00000903274, ENST00000903275, ENST00000903276, ENST00000971073, ENST00000971074, ENST00000971075
RefSeq mRNA: 1 — MANE Select: NM_002980
NM_002980
CCDS: CCDS2127
Canonical transcript exons
ENST00000019103 — 13 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000774723 | 119465789 | 119465886 |
| ENSE00000925752 | 119494428 | 119494548 |
| ENSE00001020655 | 119478811 | 119478918 |
| ENSE00001351223 | 119524155 | 119524483 |
| ENSE00001835003 | 119439843 | 119440257 |
| ENSE00003495612 | 119441558 | 119441599 |
| ENSE00003528278 | 119446759 | 119446885 |
| ENSE00003579131 | 119461847 | 119462000 |
| ENSE00003602906 | 119453287 | 119453347 |
| ENSE00003607031 | 119452010 | 119452079 |
| ENSE00003630864 | 119464123 | 119464255 |
| ENSE00003639963 | 119448689 | 119448780 |
| ENSE00003672602 | 119473453 | 119473556 |
Expression profiles
Bgee: expression breadth ubiquitous, 159 present calls, max score 98.14.
Top tissues by expression
294 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| body of pancreas | UBERON:0001150 | 98.14 | gold quality |
| metanephros cortex | UBERON:0010533 | 92.69 | gold quality |
| pancreas | UBERON:0001264 | 92.65 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 88.21 | gold quality |
| islet of Langerhans | UBERON:0000006 | 85.63 | gold quality |
| duodenum | UBERON:0002114 | 81.98 | gold quality |
| right lung | UBERON:0002167 | 79.41 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 77.46 | gold quality |
| upper lobe of lung | UBERON:0008948 | 75.17 | gold quality |
| body of stomach | UBERON:0001161 | 75.04 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 74.33 | gold quality |
| gall bladder | UBERON:0002110 | 74.30 | gold quality |
| right uterine tube | UBERON:0001302 | 74.02 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 73.12 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 72.58 | gold quality |
| right lobe of liver | UBERON:0001114 | 72.52 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 71.96 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 71.74 | gold quality |
| stomach | UBERON:0000945 | 71.56 | gold quality |
| thyroid gland | UBERON:0002046 | 70.54 | gold quality |
| small intestine | UBERON:0002108 | 70.38 | gold quality |
| right ovary | UBERON:0002118 | 70.29 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 69.75 | gold quality |
| left ovary | UBERON:0002119 | 69.72 | gold quality |
| fundus of stomach | UBERON:0001160 | 67.81 | gold quality |
| endocervix | UBERON:0000458 | 66.02 | gold quality |
| jejunal mucosa | UBERON:0000399 | 65.99 | silver quality |
| ovary | UBERON:0000992 | 65.94 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 65.45 | gold quality |
| transverse colon | UBERON:0001157 | 65.43 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 12.59 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): SP1, SP3
miRNA regulators (miRDB)
4 targeting SCTR, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-767-5P | 99.95 | 70.85 | 993 |
| HSA-MIR-6764-5P | 99.75 | 67.89 | 2304 |
| HSA-MIR-3692-5P | 99.29 | 67.04 | 1421 |
| HSA-MIR-7154-3P | 97.65 | 65.02 | 985 |
Literature-anchored findings (GeneRIF, showing 27)
- promoter methylation plays a role in the regulation of SR gene expression. (PMID:14645499)
- Secretin receptor transcripts are present in Purkinje cells and basket cells in the molecular cell layer of human cerebellum. (PMID:15706223)
- There is a marked reduction in SCTR binding in ductal neoplasia. (PMID:16192632)
- Secretin receptor oligomerization occurs through -GxxxG- motif-independent interactions of transmembrane segments during the maturation of nascent molecules. (PMID:16819820)
- The high receptor expression in cholangiocarcinomas may be used for in vivo secretin receptor-targeting of these tumors and for the differential diagnosis with hepatocellular carcinoma. (PMID:16935383)
- A novel abnormal spliceoform of the secretin receptor was identified in pancreatic and bile duct cancers and developed as a dual antibody sandwich enzyme-linked immunosorbent assay for measure in the circulation. (PMID:17678920)
- Secretin-receptor and secretin-receptor-variant expressions occur in all gastrinomas (PMID:17711922)
- secretin receptors are new markers for bronchopulmonary carcinoid tumors (PMID:18223557)
- Data show that Family B G-protein-coupled receptor oligomerization occurs, with many structurally related members, such as the secretin receptor,associating with each other. (PMID:18401761)
- These results suggest that the secretin receptor can exist only as a structurally-specific homo-dimer, without being present as higher-order oligomers. (PMID:18680717)
- Increasing expression of secretin receptor competes for receptor modifying protein 3 (RAMP3) association with calcitonin receptor-like receptor (CLR) to yield a functional adrenomedullin receptor. (PMID:19886671)
- results demonstrate that secretin and/or the modulation of SCTR expression might have potential as a therapeutic tool in the treatment of cholangiocarcinoma (PMID:19904746)
- binding and activity of a series of 11 truncated and lactam-constrained secretin(5-27) analogues at the prototypic member of this family, the secretin receptor (PMID:21851058)
- Results suggest that Secretin is a potent modulator of adipocyte functions, demonstrating overall a role in enhanced substrate cycling. (PMID:22565418)
- Data suggest that the interaction between secretin peptide residue H1 and secretin receptor residue W274 is most compatible with a hydrophobic interaction. (PMID:22964305)
- Taken together, we propose here that the down-regulatory effects of NRSF on hSCTR gene expression are mediated via its suppression on Sp1-mediated transactivation. (PMID:23168245)
- High SCTR expression is associated with liver metastases of pancreas neuroendocrine tumors. (PMID:25241033)
- Our findings indicate that SCTR suppresses the proliferation of normal breast cells, while the gene stimulates the proliferation and migration of cancer cells being downregulated by promoter methylation. (PMID:26397240)
- Cysteine trapping identified charge-charge interactions between secretin and secretin receptor residues in TM5, TM6, ECL2, and ECL3 domains. (PMID:26740626)
- elevated in primary sclerosing cholangitis liver samples compared to healthy controls (PMID:27115285)
- Structure and Function of Cross-class Complexes of G Protein-coupled Secretin and Angiotensin 1a Receptors. (PMID:27330080)
- High secretin/secretin receptor signaling mediates biliary damage and liver fibrosis in early-stage primary biliary cholangitis. (PMID:31251081)
- Structure and dynamics of the active Gs-coupled human secretin receptor. (PMID:32811827)
- SCTR hypermethylation is a diagnostic biomarker in colorectal cancer. (PMID:32970347)
- Structure of the human secretin receptor coupled to an engineered heterotrimeric G protein. (PMID:33008599)
- Inhibition of Secretin/Secretin Receptor Axis Ameliorates NAFLD Phenotypes. (PMID:33928675)
- Expression of Secretin and its Receptor Along the Intestinal Tract in Type 2 Diabetes Patients and Healthy Controls. (PMID:37335970)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Sctr | ENSMUSG00000026387 |
| rattus_norvegicus | Sctr | ENSRNOG00000049766 |
Paralogs (42): CALCR (ENSG00000004948), GIPR (ENSG00000010310), ADGRA2 (ENSG00000020181), CALCRL (ENSG00000064989), GLP2R (ENSG00000065325), ADGRF5 (ENSG00000069122), ADGRL1 (ENSG00000072071), ADCYAP1R1 (ENSG00000078549), VIPR2 (ENSG00000106018), CRHR2 (ENSG00000106113), GHRHR (ENSG00000106128), ADGRD1 (ENSG00000111452), GLP1R (ENSG00000112164), ADGRG6 (ENSG00000112414), VIPR1 (ENSG00000114812), ADGRL2 (ENSG00000117114), CRHR1 (ENSG00000120088), ADGRB2 (ENSG00000121753), ADGRE5 (ENSG00000123146), ADGRE2 (ENSG00000127507), ADGRE3 (ENSG00000131355), ADGRB3 (ENSG00000135298), PTH2R (ENSG00000144407), ADGRG7 (ENSG00000144820), ADGRL3 (ENSG00000150471), ADGRA3 (ENSG00000152990), ADGRF1 (ENSG00000153292), ADGRF4 (ENSG00000153294), ADGRG4 (ENSG00000156920), ADGRG5 (ENSG00000159618), PTH1R (ENSG00000160801), ADGRL4 (ENSG00000162618), EVA1C (ENSG00000166979), ADGRF3 (ENSG00000173567), ADGRG2 (ENSG00000173698), ADGRE1 (ENSG00000174837), ADGRD2 (ENSG00000180264), ADGRB1 (ENSG00000181790), ADGRG3 (ENSG00000182885), ADGRA1 (ENSG00000197177)
Protein
Protein identifiers
Secretin receptor — P47872 (reviewed: P47872)
All UniProt accessions (3): P47872, A0A0D9SFV7, A0A0D9SFY2
UniProt curated annotations — full annotation on UniProt →
Function. G protein-coupled receptor activated by secretin (SCT), which is involved in different processes such as regulation of the pH of the duodenal content, food intake and water homeostasis. Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and activates cAMP-dependent pathway. Upon binding to secretin, regulates the pH of the duodenum by (1) inhibiting the secretion of gastric acid from the parietal cells of the stomach and (2) stimulating the production of bicarbonate (NaHCO(3)) from the ductal cells of the pancreas. In addition to regulating the pH of the duodenal content, plays a central role in diet induced thermogenesis: acts as a non-sympathetic brown fat (BAT) activator mediating prandial thermogenesis, which consequentially induces satiation. Mechanistically, secretin released by the gut after a meal binds to secretin receptor (SCTR) in brown adipocytes, activating brown fat thermogenesis by stimulating lipolysis, which is sensed in the brain and promotes satiation. Also able to stimulate lipolysis in white adipocytes. Also plays an important role in cellular osmoregulation by regulating renal water reabsorption. Also plays a role in the central nervous system: required for synaptic plasticity.
Subcellular location. Cell membrane. Basolateral cell membrane.
Post-translational modifications. Phosphorylated on Ser and Thr residues at the cytoplasmic C-terminus by G protein-coupled receptor kinases (GRKs).
Similarity. Belongs to the G-protein coupled receptor 2 family.
RefSeq proteins (1): NP_002971* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000832 | GPCR_2_secretin-like | Family |
| IPR001879 | GPCR_2_extracellular_dom | Domain |
| IPR002144 | GPCR_2_secretin_rcpt | Family |
| IPR017981 | GPCR_2-like_7TM | Domain |
| IPR017983 | GPCR_2_secretin-like_CS | Conserved_site |
| IPR036445 | GPCR_2_extracell_dom_sf | Homologous_superfamily |
| IPR047037 | Secretin_7TM | Domain |
| IPR050332 | GPCR_2 | Family |
Pfam: PF00002, PF02793
UniProt features (58 total): helix 14, topological domain 8, transmembrane region 7, turn 6, glycosylation site 5, sequence conflict 5, strand 5, disulfide bond 4, sequence variant 2, signal peptide 1, chain 1
Structure
Experimental structures (PDB)
3 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6WZG | ELECTRON MICROSCOPY | 2.3 |
| 7D3S | ELECTRON MICROSCOPY | 2.9 |
| 6WI9 | ELECTRON MICROSCOPY | 4.3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P47872-F1 | 77.18 | 0.31 |
Antibody-complex structures (SAbDab): 3 — 6WI9, 6WZG, 7D3S
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (4): 45–75, 66–107, 89–123, 215–285
Glycosylation sites (5): 72, 100, 106, 128, 291
Function
Pathways and Gene Ontology
Reactome pathways
7 pathways
| ID | Pathway |
|---|---|
| R-HSA-418555 | G alpha (s) signalling events |
| R-HSA-420092 | Glucagon-type ligand receptors |
| R-HSA-162582 | Signal Transduction |
| R-HSA-372790 | Signaling by GPCR |
| R-HSA-373080 | Class B/2 (Secretin family receptors) |
| R-HSA-388396 | GPCR downstream signalling |
| R-HSA-500792 | GPCR ligand binding |
MSigDB gene sets: 106 (showing top):
MODULE_92, REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS, BENPORATH_ES_WITH_H3K27ME3, GOBP_RESPONSE_TO_DIETARY_EXCESS, GOBP_CELL_CELL_SIGNALING, GOBP_ADENYLATE_CYCLASE_MODULATING_G_PROTEIN_COUPLED_RECEPTOR_SIGNALING_PATHWAY, GOBP_REGULATION_OF_ANATOMICAL_STRUCTURE_SIZE, GOBP_REGULATION_OF_SYNAPTIC_PLASTICITY, MODULE_289, KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION, GOBP_REGULATION_OF_CELL_SIZE, GOBP_SYNAPTIC_SIGNALING, GOBP_REGULATION_OF_APPETITE, GOMF_PEPTIDE_RECEPTOR_ACTIVITY, GOBP_MULTICELLULAR_ORGANISMAL_LEVEL_HOMEOSTASIS
GO Biological Process (10): diet induced thermogenesis (GO:0002024), cell surface receptor signaling pathway (GO:0007166), G protein-coupled receptor signaling pathway (GO:0007186), adenylate cyclase-modulating G protein-coupled receptor signaling pathway (GO:0007188), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), intracellular water homeostasis (GO:0009992), response to nutrient levels (GO:0031667), regulation of appetite (GO:0032098), regulation of synaptic plasticity (GO:0048167), signal transduction (GO:0007165)
GO Molecular Function (5): G protein-coupled peptide receptor activity (GO:0008528), secretin receptor activity (GO:0015055), peptide hormone binding (GO:0017046), transmembrane signaling receptor activity (GO:0004888), G protein-coupled receptor activity (GO:0004930)
GO Cellular Component (4): cytoplasmic microtubule (GO:0005881), plasma membrane (GO:0005886), basolateral plasma membrane (GO:0016323), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-5 pathways:
| Category | Pathways |
|---|---|
| Signaling by GPCR | 2 |
| GPCR downstream signalling | 1 |
| Class B/2 (Secretin family receptors) | 1 |
| Signal Transduction | 1 |
| GPCR ligand binding | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| G protein-coupled receptor activity | 3 |
| signal transduction | 2 |
| G protein-coupled receptor signaling pathway | 2 |
| regulation of biological quality | 2 |
| response to dietary excess | 1 |
| adaptive thermogenesis | 1 |
| adenylate cyclase activity | 1 |
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 1 |
| adenylate cyclase activator activity | 1 |
| cell volume homeostasis | 1 |
| intracellular chemical homeostasis | 1 |
| response to stimulus | 1 |
| response to nutrient levels | 1 |
| modulation of chemical synaptic transmission | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| peptide receptor activity | 1 |
| hormone binding | 1 |
| signaling receptor activity | 1 |
| transmembrane signaling receptor activity | 1 |
| cytoplasm | 1 |
| microtubule | 1 |
| membrane | 1 |
| cell periphery | 1 |
| basal plasma membrane | 1 |
| plasma membrane region | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
734 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| SCTR | SCT | P09683 | 998 |
| SCTR | ANO6 | Q4KMQ2 | 967 |
| SCTR | VIP | P01282 | 935 |
| SCTR | ADCYAP1 | P18509 | 831 |
| SCTR | ADGRA1 | Q86SQ6 | 817 |
| SCTR | PTH | P01270 | 770 |
| SCTR | GCG | P01275 | 756 |
| SCTR | AQP2 | P41181 | 723 |
| SCTR | BAIAP3 | O94812 | 701 |
| SCTR | GIP | P09681 | 613 |
| SCTR | CFTR | P13569 | 606 |
| SCTR | RAMP3 | O60896 | 603 |
| SCTR | PTHLH | P12272 | 597 |
| SCTR | ADGRG1 | Q9Y653 | 592 |
| SCTR | SLC4A2 | P04920 | 523 |
IntAct
4 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| SCTR | CALM1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| SCTR | DNAL4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| CYFIP1 | SCTR | psi-mi:“MI:0915”(physical association) | 0.370 |
BioGRID (8): SCT (Reconstituted Complex), ADCYAP1 (Protein-peptide), CPAMD8 (Protein-peptide), SCTR (Protein-peptide), SCTR (Protein-peptide), SCTR (Protein-peptide), SCTR (Two-hybrid), SCTR (Two-hybrid)
ESM2 similar proteins: A0A2Z2U4G9, O35659, O46502, O95838, P23811, P25107, P25117, P25961, P30082, P30083, P30988, P32082, P32214, P32215, P32241, P32301, P34999, P35000, P41587, P41588, P41593, P43218, P43219, P43220, P47871, P47872, P48546, P49190, P50133, P51839, P70555, P79222, P97751, Q02643, Q02644, Q03431, Q0P543, Q1LZF7, Q28992, Q29627
Diamond homologs: A0A2Z2U4G9, A6QP74, O35659, O42602, O42603, O46502, O62772, O95838, P23811, P25107, P25117, P25961, P30082, P30083, P32082, P32215, P32241, P32301, P34998, P34999, P35000, P35347, P35353, P41586, P41587, P41588, P41593, P43218, P43219, P43220, P47866, P47871, P47872, P48546, P48960, P49190, P50133, P70205, P70555, P97751
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
90 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 67 |
| Likely benign | 6 |
| Benign | 6 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2830 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 2:119441554:TCA:T | donor_loss | 1.0000 |
| 2:119441555:CA:C | donor_loss | 1.0000 |
| 2:119441556:ACCT:A | donor_gain | 1.0000 |
| 2:119441556:ACCTC:A | donor_gain | 1.0000 |
| 2:119441557:C:CA | donor_loss | 1.0000 |
| 2:119441557:CCTC:C | donor_gain | 1.0000 |
| 2:119441557:CCTCC:C | donor_gain | 1.0000 |
| 2:119441604:C:CT | acceptor_gain | 1.0000 |
| 2:119441604:C:T | acceptor_gain | 1.0000 |
| 2:119441605:A:T | acceptor_gain | 1.0000 |
| 2:119461881:T:A | donor_gain | 1.0000 |
| 2:119464118:ATTAC:A | donor_gain | 1.0000 |
| 2:119464121:AC:A | donor_gain | 1.0000 |
| 2:119464122:CC:C | donor_gain | 1.0000 |
| 2:119524151:TCA:T | donor_loss | 1.0000 |
| 2:119524152:CA:C | donor_loss | 1.0000 |
| 2:119524153:A:AC | donor_gain | 1.0000 |
| 2:119524154:C:CC | donor_gain | 1.0000 |
| 2:119441557:CCT:C | donor_gain | 0.9900 |
| 2:119441595:AGTCC:A | acceptor_gain | 0.9900 |
| 2:119441596:GTCC:G | acceptor_gain | 0.9900 |
| 2:119441596:GTCCC:G | acceptor_loss | 0.9900 |
| 2:119441597:TCC:T | acceptor_gain | 0.9900 |
| 2:119441597:TCCCT:T | acceptor_loss | 0.9900 |
| 2:119441598:CC:C | acceptor_gain | 0.9900 |
| 2:119441598:CCC:C | acceptor_gain | 0.9900 |
| 2:119441599:CC:C | acceptor_gain | 0.9900 |
| 2:119441600:C:CC | acceptor_gain | 0.9900 |
| 2:119441600:CTGCC:C | acceptor_loss | 0.9900 |
| 2:119441601:T:C | acceptor_loss | 0.9900 |
AlphaMissense
2877 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 2:119441599:C:G | G381R | 0.998 |
| 2:119441599:C:T | G381R | 0.998 |
| 2:119452073:C:A | W286C | 0.998 |
| 2:119452073:C:G | W286C | 0.998 |
| 2:119464217:A:G | L181P | 0.998 |
| 2:119461943:A:G | W232R | 0.997 |
| 2:119461943:A:T | W232R | 0.997 |
| 2:119473522:C:A | W112C | 0.997 |
| 2:119473522:C:G | W112C | 0.997 |
| 2:119461850:A:G | W263R | 0.996 |
| 2:119461850:A:T | W263R | 0.996 |
| 2:119465846:C:T | G149D | 0.996 |
| 2:119478884:C:A | W76C | 0.996 |
| 2:119478884:C:G | W76C | 0.996 |
| 2:119461950:G:C | N229K | 0.995 |
| 2:119461950:G:T | N229K | 0.995 |
| 2:119464174:C:A | K195N | 0.995 |
| 2:119464174:C:G | K195N | 0.995 |
| 2:119478902:C:A | W70C | 0.995 |
| 2:119478902:C:G | W70C | 0.995 |
| 2:119441598:C:T | G381E | 0.994 |
| 2:119446853:G:C | P349R | 0.994 |
| 2:119464227:G:C | H178D | 0.994 |
| 2:119465847:C:G | G149R | 0.994 |
| 2:119441573:G:C | C389W | 0.993 |
| 2:119441575:A:G | C389R | 0.993 |
| 2:119446845:C:G | G352R | 0.993 |
| 2:119448775:A:C | N309K | 0.993 |
| 2:119448775:A:T | N309K | 0.993 |
| 2:119461930:T:A | E236V | 0.993 |
dbSNP variants (sampled 300 via entrez): RS1000052518 (2:119439960 C>T), RS1000062475 (2:119506400 A>G), RS1000083919 (2:119480611 G>A), RS1000121804 (2:119480868 A>G), RS1000140229 (2:119497621 A>C), RS1000165717 (2:119500468 A>C), RS1000193177 (2:119485391 T>G), RS1000257049 (2:119524566 C>G), RS1000259879 (2:119474845 C>G), RS1000309329 (2:119524768 T>G), RS1000339759 (2:119494804 G>A), RS1000394309 (2:119489161 G>C), RS1000397533 (2:119490561 A>G), RS1000425609 (2:119489436 G>A,C), RS1000430323 (2:119490840 T>C)
Disease associations
OMIM: gene MIM:182098 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST007847_120 | Type 2 diabetes | 2.000000e-08 |
| GCST008103_94 | Bipolar disorder | 2.000000e-06 |
| GCST010118_15 | Type 2 diabetes | 7.000000e-09 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1925 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL6067494 | SECRETIN | 4 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Glucagon receptor family
Most potent curated ligand interactions (9 total), top 9:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| secretin | Full agonist | 9.7 | pEC50 |
| [125I]secretin (pig) | Full agonist | 9.2 | pKd |
| secretin | Agonist | 9.0 | pIC50 |
| secretin | Full agonist | 9.0 | pKi |
| [Arg16]chicken secretin | Agonist | 7.7 | pIC50 |
| [Bpa6,Tyr10]secretin-27 (rat) | Full agonist | 7.6 | pKd |
| VIP | Partial agonist | 5.4 | pIC50 |
| [(CH2NH)4,5]secretin | Antagonist | 5.3 | pKi |
| secretin-(5-27) (pig) | Full agonist | 5.0 | pIC50 |
ChEMBL bioactivities
17 potent at pChembl≥5 of 17 total, top 17 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.10 | EC50 | 0.08 | nM | SECRETIN |
| 10.00 | EC50 | 0.1 | nM | CHEMBL1256314 |
| 8.46 | Ki | 3.5 | nM | SECRETIN |
| 7.96 | Ki | 11 | nM | CHEMBL1256314 |
| 7.39 | EC50 | 40.55 | nM | PURMORPHAMINE |
| 7.17 | EC50 | 68.08 | nM | PURMORPHAMINE |
| 7.11 | EC50 | 78.1 | nM | CHEMBL5396976 |
| 7.10 | EC50 | 80.2 | nM | CHEMBL5423791 |
| 7.10 | EC50 | 80.2 | nM | CHEMBL5418444 |
| 7.10 | EC50 | 79.1 | nM | CHEMBL5434238 |
| 7.09 | EC50 | 80.6 | nM | CHEMBL5408063 |
| 7.07 | EC50 | 85.51 | nM | PURMORPHAMINE |
| 7.07 | EC50 | 84.4 | nM | CHEMBL5429270 |
| 7.06 | EC50 | 87.5 | nM | CHEMBL5432045 |
| 7.04 | EC50 | 91.1 | nM | CHEMBL5404963 |
| 6.72 | EC50 | 190 | nM | CHEMBL5567643 |
| 6.10 | EC50 | 800 | nM | CHEMBL5560755 |
PubChem BioAssay actives
15 with measured affinity, of 37 total; 12 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (3S)-4-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-amino-1-[[2-[[(2S)-1-[[(2S)-1-amino-3-methyl-1-oxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(4R,7S,10R)-10-[[(2S)-2-[[(2S,3R)-2-[[2-[[(2S)-2-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]amino]acetyl]amino]-3-hydroxybutanoyl]amino]-3-phenylpropanoyl]amino]-7-(hydroxymethyl)-6,9-dioxo-1,2-dithia-5,8-diazacycloundecane-4-carbonyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-hydroxypropanoyl]amino]-5-carbamimidamidopentanoyl]amino]-4-methylpentanoyl]amino]-5-oxopentanoyl]amino]-4-oxobutanoic acid | 517108: Agonist activity at secretin receptor expressed in CHO cells assessed as increase of cAMP level | ec50 | 0.0001 | uM |
| 9-cyclohexyl-N-(4-morpholin-4-ylphenyl)-2-naphthalen-1-yloxypurin-6-amine | 1999693: Positive allosteric modulation of SCTR (unknown origin) expressed in CHO cells assessed as potentiation of SCT-induced cAMP production by measuring secretin EC50 at 10 uM incubated for 20 mins in presence of 1 uM SCT by Lance cAMP assay (Rvb = 7.77 +/- 0.116 No_unit) | ec50 | 0.0406 | uM |
| 7-cyclohexyl-4-(4-morpholin-4-ylanilino)-2-naphthalen-1-yloxypyrrolo[2,3-d]pyrimidine-5-carboxylic acid | 1999697: Positive allosteric modulation of SCTR (unknown origin) overexpressed in CHO cells assessed as potentiation of SCT-induced cAMP production by measuring secretin EC50 at 100 uM incubated for 20 mins by Lance cAMP assay | ec50 | 0.0781 | uM |
| 9-cyclohexyl-2-naphthalen-1-yloxy-N-(4-naphthalen-1-ylphenyl)purin-6-amine | 1999698: Negative allosteric modulation of SCTR (unknown origin) overexpressed in CHO cells assessed as decrease in SCT-induced cAMP production by measuring secretin EC50 at 100 uM incubated for 20 mins by Lance cAMP assay | ec50 | 0.0791 | uM |
| 5-[9-cyclohexyl-6-(4-morpholin-4-ylanilino)purin-2-yl]oxynaphthalen-2-ol | 1999697: Positive allosteric modulation of SCTR (unknown origin) overexpressed in CHO cells assessed as potentiation of SCT-induced cAMP production by measuring secretin EC50 at 100 uM incubated for 20 mins by Lance cAMP assay | ec50 | 0.0802 | uM |
| 2-[(9-cyclohexyl-2-naphthalen-1-yloxypurin-6-yl)amino]-5-morpholin-4-ylphenol | 1999697: Positive allosteric modulation of SCTR (unknown origin) overexpressed in CHO cells assessed as potentiation of SCT-induced cAMP production by measuring secretin EC50 at 100 uM incubated for 20 mins by Lance cAMP assay | ec50 | 0.0802 | uM |
| 9-cyclohexyl-2-naphthalen-1-yloxy-N-(4-phenoxyphenyl)purin-6-amine | 1999697: Positive allosteric modulation of SCTR (unknown origin) overexpressed in CHO cells assessed as potentiation of SCT-induced cAMP production by measuring secretin EC50 at 100 uM incubated for 20 mins by Lance cAMP assay | ec50 | 0.0806 | uM |
| cis-(1R,3S)-3-[6-(4-morpholin-4-ylanilino)-2-naphthalen-1-yloxypurin-9-yl]cyclohexan-1-ol | 1999697: Positive allosteric modulation of SCTR (unknown origin) overexpressed in CHO cells assessed as potentiation of SCT-induced cAMP production by measuring secretin EC50 at 100 uM incubated for 20 mins by Lance cAMP assay | ec50 | 0.0844 | uM |
| 9-cyclohexyl-2-naphthalen-1-yloxy-N-(4-phenylphenyl)purin-6-amine | 1999698: Negative allosteric modulation of SCTR (unknown origin) overexpressed in CHO cells assessed as decrease in SCT-induced cAMP production by measuring secretin EC50 at 100 uM incubated for 20 mins by Lance cAMP assay | ec50 | 0.0875 | uM |
| 1-[4-[(9-cyclohexyl-2-naphthalen-1-yloxypurin-6-yl)amino]phenyl]piperidin-4-ol | 1999697: Positive allosteric modulation of SCTR (unknown origin) overexpressed in CHO cells assessed as potentiation of SCT-induced cAMP production by measuring secretin EC50 at 100 uM incubated for 20 mins by Lance cAMP assay | ec50 | 0.0911 | uM |
| 20-[[4-[2-[2-[2-[2-[2-[2-[[(5S)-6-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[1-[[(2S)-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-amino-3-methyl-1-oxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(1H-imidazol-4-yl)-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-2-methyl-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-5-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S,3R)-2-[[2-[[(2S)-2-[[2-[[(2S)-2-amino-3-(1H-imidazol-4-yl)propanoyl]amino]-2-methylpropanoyl]amino]-4-carboxybutanoyl]amino]acetyl]amino]-3-hydroxybutanoyl]amino]-3-phenylpropanoyl]amino]-3-hydroxybutanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]amino]-3-methylbutanoyl]amino]-3-hydroxypropanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-4-methylpentanoyl]amino]-6-oxohexyl]amino]-2-oxoethoxy]ethoxy]ethylamino]-2-oxoethoxy]ethoxy]ethylamino]-1-carboxy-4-oxobutyl]amino]-20-oxoicosanoic acid | 2085861: Agonist activity human SCTR stably expressed in CHO-K1 cells assessed as reduction in cAMP accumulation incubated for 30 mins by TR-FRET assay | ec50 | 0.1900 | uM |
| (4S)-5-[[2-[[(2S,3S)-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[2-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S,3S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[2-[[(1S)-4-carbamimidamido-1-carboxybutyl]amino]-2-oxoethyl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(1H-indol-3-yl)-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-2-oxoethyl]amino]-4-carboxy-1-oxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-3-carboxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-2-oxoethyl]amino]-4-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-4-yl)propanoyl]amino]propanoyl]amino]-5-oxopentanoic acid | 2085861: Agonist activity human SCTR stably expressed in CHO-K1 cells assessed as reduction in cAMP accumulation incubated for 30 mins by TR-FRET assay | ec50 | 0.8000 | uM |
CTD chemical–gene interactions
16 total (human), top 16 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Cadmium | decreases expression, increases abundance | 2 |
| Nickel | decreases expression | 2 |
| CGP 52608 | affects binding, increases reaction | 1 |
| abrine | increases expression | 1 |
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Zoledronic Acid | decreases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Benzo(a)pyrene | affects methylation, increases methylation | 1 |
| Plant Extracts | affects cotreatment, decreases expression | 1 |
| Tretinoin | affects expression | 1 |
| Triclosan | increases expression | 1 |
| Valproic Acid | decreases expression | 1 |
| Cyclosporine | decreases expression | 1 |
| Aflatoxin B1 | increases methylation | 1 |
| Antirheumatic Agents | decreases expression | 1 |
| Cadmium Chloride | decreases expression, increases abundance | 1 |
ChEMBL screening assays
20 unique, capped per target: 16 functional, 4 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1259932 | Binding | Displacement of [125I]-secretin-27 from secretin receptor expressed in CHO cells by gamma-spectrometer analysis | Elucidation of the active conformation of the amino terminus of receptor-bound secretin using intramolecular disulfide bond constraints. — Bioorg Med Chem Lett |
| CHEMBL1259933 | Functional | Agonist activity at secretin receptor expressed in CHO cells assessed as increase of cAMP level | Elucidation of the active conformation of the amino terminus of receptor-bound secretin using intramolecular disulfide bond constraints. — Bioorg Med Chem Lett |
Cellosaurus cell lines
8 cell lines: 4 spontaneously immortalized cell line, 3 transformed cell line, 1 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_C0TR | ACTOne SCTR | Transformed cell line | Female |
| CVCL_H498 | CHO-K1/SCTR/Galpha15 | Spontaneously immortalized cell line | Female |
| CVCL_KV80 | cAMP Hunter CHO-K1 SCTR Gs | Spontaneously immortalized cell line | Female |
| CVCL_KZ09 | PathHunter CHO-K1 SCTR beta-arrestin | Spontaneously immortalized cell line | Female |
| CVCL_KZ66 | PathHunter HEK 293 SCTR beta-arrestin | Transformed cell line | Female |
| CVCL_LB31 | PathHunter U2OS SCTR Activated GPCR Internalization | Cancer cell line | Female |
| CVCL_T423 | Psi-CRIP-RxhSecR-bsr | Transformed cell line | Male |
| CVCL_ZK88 | GeneBLAzer SCTR-CRE-bla CHO-K1 | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Targeted by drugs: Secretin, Secretin Synthetic Human
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): bipolar disorder, type 2 diabetes mellitus