SDK2-AS1

Summary

SDK2-AS1 (SDK2 antisense RNA 1, HGNC:58559) is a long non-coding RNA gene on chromosome 17q25.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58559
Approved symbol	SDK2-AS1
Name	SDK2 antisense RNA 1
Location	17q25.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000264985
Ensembl biotype	lncRNA
Entrez	101928251

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000583547, ENST00000583712, ENST00000650299, ENST00000655723

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000583547 — 2 exons

Exon	Start	End
ENSE00002705180	73516601	73518770
ENSE00002707618	73513612	73513790

Expression profiles

Bgee: expression breadth broad, 57 present calls, max score 86.80.

Top tissues by expression

147 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	86.80	gold quality
cortical plate	UBERON:0005343	72.52	gold quality
sperm	CL:0000019	72.26	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	71.62	gold quality
superficial temporal artery	UBERON:0001614	69.89	gold quality
cerebellar vermis	UBERON:0004720	66.39	gold quality
vena cava	UBERON:0004087	65.55	gold quality
cardia of stomach	UBERON:0001162	65.45	gold quality
saphenous vein	UBERON:0007318	64.07	gold quality
tendon of biceps brachii	UBERON:0008188	63.92	gold quality
pericardium	UBERON:0002407	63.86	gold quality
nipple	UBERON:0002030	63.61	gold quality
adrenal cortex	UBERON:0001235	63.42	gold quality
pharyngeal mucosa	UBERON:0000355	63.33	gold quality
thymus	UBERON:0002370	63.13	gold quality
oocyte	CL:0000023	63.10	gold quality
gingival epithelium	UBERON:0001949	63.10	gold quality
omental fat pad	UBERON:0010414	63.06	gold quality
peritoneum	UBERON:0002358	62.88	gold quality
superior vestibular nucleus	UBERON:0007227	62.84	silver quality
trachea	UBERON:0003126	62.71	gold quality
coronary artery	UBERON:0001621	62.41	gold quality
pylorus	UBERON:0001166	62.31	gold quality
substantia nigra pars reticulata	UBERON:0001966	62.31	gold quality
lymph node	UBERON:0000029	62.30	gold quality
pons	UBERON:0000988	62.25	gold quality
lateral nuclear group of thalamus	UBERON:0002736	62.24	gold quality
synovial joint	UBERON:0002217	62.16	gold quality
nasal cavity epithelium	UBERON:0005384	62.13	gold quality
superior surface of tongue	UBERON:0007371	62.03	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.28

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.