SELE
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Also known as ESELCD62E
Summary
SELE (selectin E, HGNC:10718) is a protein-coding gene on chromosome 1q24.2, encoding E-selectin (P16581). Cell-surface glycoprotein having a role in immunoadhesion.
The protein encoded by this gene is found in cytokine-stimulated endothelial cells and is thought to be responsible for the accumulation of blood leukocytes at sites of inflammation by mediating the adhesion of cells to the vascular lining. It exhibits structural features such as the presence of lectin- and EGF-like domains followed by short consensus repeat (SCR) domains that contain 6 conserved cysteine residues. These proteins are part of the selectin family of cell adhesion molecules. Adhesion molecules participate in the interaction between leukocytes and the endothelium and appear to be involved in the pathogenesis of atherosclerosis.
Source: NCBI Gene 6401 — RefSeq curated summary.
At a glance
- GWAS associations: 4
- Clinical variants (ClinVar): 92 total
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_000450
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:10718 |
| Approved symbol | SELE |
| Name | selectin E |
| Location | 1q24.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | ESEL, CD62E |
| Ensembl gene | ENSG00000007908 |
| Ensembl biotype | protein_coding |
| OMIM | 131210 |
| Entrez | 6401 |
Gene structure
Transcript identifiers
Ensembl transcripts: 7 — 6 protein_coding, 1 retained_intron
ENST00000333360, ENST00000367774, ENST00000367775, ENST00000367776, ENST00000367777, ENST00000461085, ENST00000609271
RefSeq mRNA: 1 — MANE Select: NM_000450
NM_000450
CCDS: CCDS1283
Canonical transcript exons
ENST00000333360 — 14 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000451012 | 169729488 | 169729673 |
| ENSE00000451027 | 169727739 | 169727927 |
| ENSE00000451043 | 169726699 | 169726806 |
| ENSE00000789637 | 169725907 | 169725928 |
| ENSE00000789639 | 169727349 | 169727525 |
| ENSE00000789641 | 169728058 | 169728246 |
| ENSE00000789642 | 169729186 | 169729374 |
| ENSE00000789644 | 169730432 | 169730617 |
| ENSE00000789645 | 169731835 | 169731942 |
| ENSE00000814463 | 169732615 | 169732998 |
| ENSE00000814464 | 169725729 | 169725801 |
| ENSE00001367867 | 169733576 | 169733660 |
| ENSE00001950222 | 169733971 | 169734079 |
| ENSE00003845714 | 169722640 | 169724509 |
Expression profiles
Bgee: expression breadth ubiquitous, 213 present calls, max score 99.08.
FANTOM5 (CAGE): breadth broad, TPM avg 7.3226 / max 537.1415, expressed in 245 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 15861 | 7.3126 | 245 |
| 15862 | 0.0101 | 3 |
Top tissues by expression
281 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| vena cava | UBERON:0004087 | 99.08 | gold quality |
| left uterine tube | UBERON:0001303 | 91.18 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 87.18 | gold quality |
| seminal vesicle | UBERON:0000998 | 86.50 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 85.93 | gold quality |
| trachea | UBERON:0003126 | 85.01 | gold quality |
| mucosa of stomach | UBERON:0001199 | 84.71 | gold quality |
| cartilage tissue | UBERON:0002418 | 83.99 | gold quality |
| mucosa of urinary bladder | UBERON:0001259 | 82.68 | gold quality |
| gall bladder | UBERON:0002110 | 82.00 | gold quality |
| saphenous vein | UBERON:0007318 | 81.15 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 80.22 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 78.60 | gold quality |
| omental fat pad | UBERON:0010414 | 76.96 | gold quality |
| peritoneum | UBERON:0002358 | 76.86 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 76.82 | gold quality |
| thyroid gland | UBERON:0002046 | 76.52 | gold quality |
| parietal pleura | UBERON:0002400 | 76.44 | gold quality |
| vermiform appendix | UBERON:0001154 | 76.01 | gold quality |
| superficial temporal artery | UBERON:0001614 | 75.76 | gold quality |
| pleura | UBERON:0000977 | 75.47 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 75.36 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 74.98 | gold quality |
| prostate gland | UBERON:0002367 | 74.60 | gold quality |
| right lobe of liver | UBERON:0001114 | 73.75 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 73.71 | gold quality |
| periodontal ligament | UBERON:0008266 | 72.97 | gold quality |
| penis | UBERON:0000989 | 72.94 | gold quality |
| colonic epithelium | UBERON:0000397 | 72.07 | gold quality |
| visceral pleura | UBERON:0002401 | 71.76 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 4.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-10137 | yes | 5426.25 |
| E-MTAB-9841 | yes | 4064.98 |
| E-GEOD-135922 | yes | 34.18 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AP1, AR, ATF2, ATF3, ATF7, CCL3, CUX1, E2F1, EGR1, ETS1, GDF2, GLI2, HMGA1, HMGA2, HOXA9, IL1B, JUN, KLF2, KLF4, NCOA1, NFKB1, NFKB, NFKBIE, NRG1, POU2F1, PPARA, REL, RELA, SIRT1, STAT6, TNF, ZBTB7A, ZHX2
miRNA regulators (miRDB)
96 targeting SELE, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-3162-3P | 100.00 | 65.37 | 363 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-3185 | 99.99 | 68.12 | 1959 |
| HSA-MIR-4803 | 99.98 | 71.99 | 3117 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-767-5P | 99.95 | 70.85 | 993 |
| HSA-MIR-141-3P | 99.94 | 72.79 | 2421 |
| HSA-MIR-200A-3P | 99.94 | 72.68 | 2420 |
| HSA-MIR-381-3P | 99.93 | 71.87 | 2854 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-300 | 99.92 | 71.76 | 2856 |
| HSA-MIR-1305 | 99.91 | 71.43 | 3443 |
| HSA-MIR-374A-5P | 99.90 | 71.34 | 2923 |
| HSA-MIR-374B-5P | 99.90 | 69.98 | 2734 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
| HSA-MIR-8062 | 99.88 | 68.43 | 995 |
| HSA-MIR-576-5P | 99.84 | 70.46 | 2582 |
| HSA-MIR-6079 | 99.84 | 68.54 | 1170 |
| HSA-MIR-6515-3P | 99.82 | 68.19 | 1933 |
| HSA-MIR-944 | 99.82 | 70.85 | 3042 |
| HSA-MIR-204-5P | 99.79 | 71.62 | 2439 |
Literature-anchored findings (GeneRIF, showing 40)
- circadian variations in healthy adults and in subjects with type II diabetes; possible role in increased vascular wall uptake of lipoproteins in diabetic subjects (PMID:11697721)
- The e-selectin C allele was more common in systemic lupus erythematosus than in controls. E-selectin may be a susceptibility gene to systemic lupus erythematosus in these populations. (PMID:11764211)
- Premature labor is associated with up-regulation of adhesion molecules in the lower uterine segment (PMID:11776680)
- activation of expression by HIV-1 tat protein via NF-kappa B-dependent mechanism (PMID:11827962)
- two SNPs in the E-selectin gene and six SNPs in the L-selectin gene were significantly associated with IgAN in Japanese patients (PMID:11828340)
- significant increase in plasma levels between day 1 and day 5 of G-CSF-induced stem cell mobilization; possible effect on leukocyte-endothelial cell interactions (PMID:11847011)
- role of phosphoserine-type di-leucine motif in E-selectin internalization (PMID:11859093)
- E-selectin and vWF were not correlated with percent body fat, but were negatively correlated with M (r= -0.65 and -0.46, both P<0.001) and positively correlated with CRP (r=0.46, and 0.33, both P<0.05). (PMID:11882337)
- Human mast cell progenitors use alpha4-integrin, VCAM-1, and PSGL-1, E-selectin for adhesive interactions with human vascular endothelium under flow conditions (PMID:11929779)
- relation between glycemic control, hyperinsulinism and plasma concentration in patints with glucose intolerance or NIDDM (PMID:11935152)
- results showed that sP-selectin and sE-selectin levels were higher in patients with lung cancer compared to normal donors; increased levels of sP-selectin and sE-selectin were associated with squamous lung cancer at late stages but not adenocarcinoma (PMID:11936588)
- inhibition of cytokine induction of promoter by 17beta-estradiol (PMID:11948013)
- Eosinophil interaction with endothelial P-selectin is far more important than interaction with E-selectin for recruitment into the inflamed skin of patients with atopic dermatitis. (PMID:11981814)
- E-selectin blood levels are no different in non-Hodgkin’s lymphoma patients and controls (PMID:12011765)
- X-irradiation 2-5 h before stimulation decreased the characteristic transient expression of E-selectin after TNFalpha stimulation. (PMID:12020443)
- the preferential expression of selectin E on the endothelium of femoral and iliac arteries in thromboangiitis obliterans (PMID:12086338)
- CD62L on human cultured T lymphoblasts is one of several glycoproteins that interacts directly with E-selectin and contributes to rolling under flow. (PMID:12165498)
- E-selectin, intercellular adhesion molecule-1 (ICAM-1), and vascular adhesion molecule-1 (VCAM-1) were measured in serum from hypertensive patients with LV hypertrophy (PMID:12172318)
- Downregulation of e-selectin is associated with nodal metastasis in breast cancer (PMID:12172576)
- circulating soluble selectin E in acute myeloid leukemia is correlated with peripheral blast cell counts, extramedullaary infiltration, relapse and mortality (PMID:12186696)
- Conjunctival biopsies excised from patients following cataract surgery did not show that endothelial E-selectin might play a role in the surgery-induced up-regulation of leukocyte rolling. (PMID:12200386)
- enhanced expression of E-selectin may contribute to the development of diabetic maculopathy in type 2 diabetes (PMID:12388172)
- A serine to arginine (S128R) polymorphism in E-selectin extends the range of lymphocytes recruited by E-selectin, which may provide a mechanistic link between this polymorphism and vascular inflammatory disease. (PMID:12421968)
- interacts with fuco-oligosaccharides of the blood group family (PMID:12499405)
- is a potent mediator of human dermal microvascular endothelial cell (HMVEC) chemotaxis, which is predominantly mediated through the Src and the phosphatidylinositiol 3-kinase (PI3K) pathways (PMID:12522014)
- The E-selectin Ser128Arg polymorphism can functionally alter leukocyte-endothelial interactions as well as biochemical and biological consequences, which may account for the pathogenesis of myocardial infarction. (PMID:12649084)
- Endothelial cells have increased expression of VCAM-1, E-selectin, and ICAM-1 when exposed to sickle blood cells. (PMID:12673844)
- Enhanced expression of E-selectin on the vascular endothelium of peripheral nerve in critically ill patients with neuromuscular disorders. (PMID:12698264)
- interacts with Helicobacter pylori isolates from patients with chronic gastritis, duodenal ulcer and gastric cancer (PMID:12738381)
- Extravasated and oxidized LDL in xanthoma adds to foam cell recruitment by activating tyrosine kinase and inducing adhesion of monocytes to dermal microvascular endothelial cells through VCAM-1 and E-selectin. (PMID:12788528)
- High serum soluble E-selectin levels are associated with postoperative haematogenic recurrence in esophageal squamous cell carcinoma (PMID:12792758)
- The adhesion of E-selectin expressing CHO cells to the coated mucins was analyzed in a flow system revealing that the MUC1 mucin adhered better than the CD43 mucin (PMID:12820726)
- central obese subjects with concomitant higher levels of selectin E and ACE DD genotype may be characterized by early cardiovascular alterations and then considered a particular subset of subjects at higher risk of cardiovascular disease (PMID:12898464)
- Blood levels do not differ in normal and coronary artery disease patients. (PMID:12940514)
- Localization of E-selectin in lipid rafts is necessary for its association with, and activation of, phospholipase C gamma. (PMID:12960351)
- Adrenomedullin and ACTH induce cell surface expression of adhesion molecules E-selectin, VCAM-1, and ICAM-1 on human umbilical vein endothelial cells. (PMID:14534081)
- E-selectin has a role in promoting growth inhibition and apoptosis of human and murine hematopoietic progenitor cells independent of PSGL-1 (PMID:14592840)
- E-selectin and its ligand-sLeX are closely correlated with the metastasis of hepatocellular carcinoma (PMID:14607629)
- minor trauma to skin may induce expression of E-selectin, ICAM-1 and IL-8 (PMID:14714557)
- Coexpression of E-selectin with ICAM-1 and CCL17 on blood vessels in noninflamed skin provides the basis for a model of cutaneous immunosurveillance system active in the absence of pathologic inflammation. (PMID:14734737)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | selp | ENSDARG00000042138 |
| mus_musculus | Sele | ENSMUSG00000026582 |
| rattus_norvegicus | Sele | ENSRNOG00000002723 |
Paralogs (39): CFH (ENSG00000000971), C8B (ENSG00000021852), C6 (ENSG00000039537), SEZ6 (ENSG00000063015), CFHR2 (ENSG00000080910), APOH (ENSG00000091583), SEZ6L (ENSG00000100095), SUSD6 (ENSG00000100647), SRPX (ENSG00000101955), SRPX2 (ENSG00000102359), C7 (ENSG00000112936), C9 (ENSG00000113600), PAPPA2 (ENSG00000116183), CFHR3 (ENSG00000116785), CR2 (ENSG00000117322), CD46 (ENSG00000117335), CSMD2 (ENSG00000121904), C4BPA (ENSG00000123838), C4BPB (ENSG00000123843), CFHR4 (ENSG00000134365), CFHR5 (ENSG00000134389), F13B (ENSG00000143278), SUSD4 (ENSG00000143502), C8A (ENSG00000157131), SUSD3 (ENSG00000157303), CSMD3 (ENSG00000164796), SVEP1 (ENSG00000165124), C2 (ENSG00000166278), SELP (ENSG00000174175), SEZ6L2 (ENSG00000174938), PRF1 (ENSG00000180644), PAPPA (ENSG00000182752), CSMD1 (ENSG00000183117), SELL (ENSG00000188404), CD55 (ENSG00000196352), CR1L (ENSG00000197721), CR1 (ENSG00000203710), CFB (ENSG00000243649), CFHR1 (ENSG00000244414)
Protein
Protein identifiers
E-selectin — P16581 (reviewed: P16581)
Alternative names: CD62 antigen-like family member E, Endothelial leukocyte adhesion molecule 1, Leukocyte-endothelial cell adhesion molecule 2
All UniProt accessions (6): P16581, Q5TI72, Q5TI73, Q5TI74, Q5TI75, V9GYI4
UniProt curated annotations — full annotation on UniProt →
Function. Cell-surface glycoprotein having a role in immunoadhesion. Mediates in the adhesion of blood neutrophils in cytokine-activated endothelium through interaction with SELPLG/PSGL1. May have a role in capillary morphogenesis.
Subunit / interactions. Interacts with SELPLG/PSGL1 and PODXL2 through the sialyl Lewis X epitope. SELPLG sulfation appears not to be required for this interaction.
Subcellular location. Cell membrane.
Polymorphism. A polymorphism in position 149 is associated with a higher risk of coronary artery disease (CAD). A significantly higher mutation frequency (Arg-149) is observed in patients with angiographically proven severe atherosclerosis compared with an unselected population (Ser-149).
Similarity. Belongs to the selectin/LECAM family.
RefSeq proteins (1): NP_000441* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000436 | Sushi_SCR_CCP_dom | Domain |
| IPR000742 | EGF | Domain |
| IPR001304 | C-type_lectin-like | Domain |
| IPR002396 | Selectin_superfamily | Family |
| IPR016186 | C-type_lectin-like/link_sf | Homologous_superfamily |
| IPR016187 | CTDL_fold | Homologous_superfamily |
| IPR018378 | C-type_lectin_CS | Conserved_site |
| IPR033991 | Selectin_CTLD | Domain |
| IPR035976 | Sushi/SCR/CCP_sf | Homologous_superfamily |
Pfam: PF00008, PF00059, PF00084
UniProt features (93 total): strand 25, disulfide bond 19, glycosylation site 11, sequence variant 11, domain 8, binding site 8, helix 3, topological domain 2, turn 2, signal peptide 1, chain 1, transmembrane region 1, mutagenesis site 1
Structure
Experimental structures (PDB)
17 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 1G1T | X-RAY DIFFRACTION | 1.5 |
| 9RAK | X-RAY DIFFRACTION | 1.9 |
| 4C16 | X-RAY DIFFRACTION | 1.93 |
| 1ESL | X-RAY DIFFRACTION | 2 |
| 6EYI | X-RAY DIFFRACTION | 2.04 |
| 6EYJ | X-RAY DIFFRACTION | 2.2 |
| 8R5L | X-RAY DIFFRACTION | 2.2 |
| 9HGW | X-RAY DIFFRACTION | 2.2 |
| 6EYK | X-RAY DIFFRACTION | 2.21 |
| 9HGU | X-RAY DIFFRACTION | 2.3 |
| 9RAL | X-RAY DIFFRACTION | 2.4 |
| 4CSY | X-RAY DIFFRACTION | 2.41 |
| 9HGV | X-RAY DIFFRACTION | 2.46 |
| 8R5M | X-RAY DIFFRACTION | 2.49 |
| 9HGY | X-RAY DIFFRACTION | 2.5 |
| 9RAM | X-RAY DIFFRACTION | 2.6 |
| 9HGX | X-RAY DIFFRACTION | 2.75 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P16581-F1 | 83.28 | 0.55 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (8): 101–109; 101; 103; 109; 113–118; 126–128; 126; 127
Disulfide bonds (19): 40–138, 111–130, 143–154, 148–163, 165–174, 180–224, 193–206, 210–237, 242–286, 255–268, 272–299, 304–349, 335–362, 367–412, 398–425, 430–475, 461–488, 493–534, 520–547
Glycosylation sites (11): 25, 145, 160, 179, 199, 203, 265, 312, 332, 503, 527
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 109 | decreased adhesion to cells expressing selplg. |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-202733 | Cell surface interactions at the vascular wall |
| R-HSA-109582 | Hemostasis |
MSigDB gene sets: 234 (showing top):
GSE45365_NK_CELL_VS_CD11B_DC_DN, WALLACE_PROSTATE_CANCER_RACE_UP, GOBP_HETEROPHILIC_CELL_CELL_ADHESION, GOBP_POSITIVE_REGULATION_OF_ENDOCYTOSIS, MCLACHLAN_DENTAL_CARIES_UP, YAGI_AML_WITH_INV_16_TRANSLOCATION, GOBP_INFLAMMATORY_RESPONSE, GOBP_RESPONSE_TO_PEPTIDE, MODULE_418, GOCC_CELL_SURFACE, GOBP_VESICLE_MEDIATED_TRANSPORT, PID_REG_GR_PATHWAY, GOBP_POSITIVE_REGULATION_OF_RECEPTOR_MEDIATED_ENDOCYTOSIS, GOBP_REGULATION_OF_LEUKOCYTE_MIGRATION, GOBP_REGULATION_OF_VESICLE_MEDIATED_TRANSPORT
GO Biological Process (19): positive regulation of receptor internalization (GO:0002092), leukocyte migration involved in inflammatory response (GO:0002523), positive regulation of leukocyte migration (GO:0002687), inflammatory response (GO:0006954), heterophilic cell-cell adhesion (GO:0007157), leukocyte cell-cell adhesion (GO:0007159), phospholipase C-activating G protein-coupled receptor signaling pathway (GO:0007200), calcium-mediated signaling (GO:0019722), actin filament-based process (GO:0030029), response to lipopolysaccharide (GO:0032496), response to cytokine (GO:0034097), response to tumor necrosis factor (GO:0034612), regulation of inflammatory response (GO:0050727), leukocyte tethering or rolling (GO:0050901), response to interleukin-1 (GO:0070555), positive regulation of leukocyte tethering or rolling (GO:1903238), cell adhesion (GO:0007155), leukocyte migration (GO:0050900), obsolete cell-cell adhesion via plasma-membrane adhesion molecules (GO:0098742)
GO Molecular Function (7): transmembrane signaling receptor activity (GO:0004888), sialic acid binding (GO:0033691), phospholipase binding (GO:0043274), metal ion binding (GO:0046872), oligosaccharide binding (GO:0070492), protein binding (GO:0005515), carbohydrate binding (GO:0030246)
GO Cellular Component (9): obsolete extracellular space (GO:0005615), plasma membrane (GO:0005886), caveola (GO:0005901), clathrin-coated pit (GO:0005905), external side of plasma membrane (GO:0009897), cortical cytoskeleton (GO:0030863), membrane raft (GO:0045121), perinuclear region of cytoplasm (GO:0048471), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Hemostasis | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| inflammatory response | 2 |
| leukocyte migration | 2 |
| cell-cell adhesion | 2 |
| cellular process | 2 |
| response to cytokine | 2 |
| binding | 2 |
| membrane | 2 |
| cellular anatomical structure | 2 |
| regulation of receptor internalization | 1 |
| receptor internalization | 1 |
| positive regulation of receptor-mediated endocytosis | 1 |
| positive regulation of immune system process | 1 |
| regulation of leukocyte migration | 1 |
| positive regulation of cell migration | 1 |
| defense response | 1 |
| G protein-coupled receptor signaling pathway | 1 |
| phospholipase C activator activity | 1 |
| intracellular signaling cassette | 1 |
| response to molecule of bacterial origin | 1 |
| response to lipid | 1 |
| response to oxygen-containing compound | 1 |
| response to peptide | 1 |
| regulation of defense response | 1 |
| regulation of response to external stimulus | 1 |
| cellular extravasation | 1 |
| leukocyte adhesion to vascular endothelial cell | 1 |
| leukocyte tethering or rolling | 1 |
| regulation of leukocyte tethering or rolling | 1 |
| positive regulation of leukocyte adhesion to vascular endothelial cell | 1 |
| immune system process | 1 |
| cell migration | 1 |
| signaling receptor activity | 1 |
| carboxylic acid binding | 1 |
| carbohydrate derivative binding | 1 |
| enzyme binding | 1 |
| cation binding | 1 |
| carbohydrate binding | 1 |
| cell periphery | 1 |
| plasma membrane raft | 1 |
| endomembrane system | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
22 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CD44 | SELE | psi-mi:“MI:0915”(physical association) | 0.610 |
| CD44 | SELE | psi-mi:“MI:0407”(direct interaction) | 0.610 |
| SELE | WFS1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SELE | SPRED1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SELE | ATXN3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SELE | SELPLG | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| GLG1 | SELE | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| SELE | CEACAM1 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| SELE | MCAM | psi-mi:“MI:0915”(physical association) | 0.400 |
| SELE | CEACAM5 | psi-mi:“MI:0915”(physical association) | 0.400 |
| SELE | PODXL | psi-mi:“MI:0915”(physical association) | 0.400 |
| SELE | SBF1 | psi-mi:“MI:0914”(association) | 0.350 |
| PTPN11 | SELE | psi-mi:“MI:0914”(association) | 0.350 |
| TRIM54 | SELE | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (23): PTK2 (Reconstituted Complex), PXN (Reconstituted Complex), ACTA2 (Reconstituted Complex), VCL (Reconstituted Complex), FLNA (Reconstituted Complex), DIP2B (Affinity Capture-MS), DIP2A (Affinity Capture-MS), MBLAC2 (Affinity Capture-MS), MTMR1 (Affinity Capture-MS), SBF1 (Affinity Capture-MS), SELE (Affinity Capture-Western), SELE (Affinity Capture-Western), SELE (Two-hybrid), SELE (Affinity Capture-Western), MTMR1 (Affinity Capture-MS)
ESM2 similar proteins: O08569, O62837, O88174, P02749, P04003, P05160, P08607, P14151, P15529, P16109, P16581, P17690, P19070, P20023, P20851, P26644, P27113, P30836, P33703, P33730, P68638, P68639, P70105, P79138, P98105, P98107, P98131, Q00690, Q01102, Q01339, Q03472, Q07968, Q22328, Q28065, Q28768, Q5R4D0, Q60401, Q60736, Q61475, Q61476
Diamond homologs: A0JNA2, A2AVA0, O02839, O08569, O14594, O19124, O62685, O62837, O88174, P04003, P06681, P08174, P10643, P15529, P16109, P16581, P17927, P19070, P20023, P49457, P55066, P55067, P68638, P68639, P70105, P79138, Q01016, Q03472, Q09101, Q22328, Q28065, Q28085, Q28768, Q29RN8, Q2HRD4, Q2VPA4, Q3SYW2, Q4LDE5, Q4V9Z5, Q501P1
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| SELE | up-regulates | ITGAL | |
| SELPLG | up-regulates | SELE | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 13 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Cell surface interactions at the vascular wall | 5 | 43.3× | 6e-06 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| cell adhesion | 5 | 14.4× | 3e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
92 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 76 |
| Likely benign | 6 |
| Benign | 7 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1275 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:169725799:CTG:C | acceptor_gain | 1.0000 |
| 1:169725802:C:CC | acceptor_gain | 1.0000 |
| 1:169725924:CTTTG:C | acceptor_gain | 1.0000 |
| 1:169725925:TTTG:T | acceptor_gain | 1.0000 |
| 1:169725926:TTG:T | acceptor_gain | 1.0000 |
| 1:169725927:TG:T | acceptor_gain | 1.0000 |
| 1:169725927:TGCTG:T | acceptor_loss | 1.0000 |
| 1:169725929:C:CC | acceptor_gain | 1.0000 |
| 1:169725929:CT:C | acceptor_loss | 1.0000 |
| 1:169726692:T:TA | donor_gain | 1.0000 |
| 1:169726694:CTCA:C | donor_loss | 1.0000 |
| 1:169726695:TCA:T | donor_loss | 1.0000 |
| 1:169726696:CA:C | donor_loss | 1.0000 |
| 1:169726697:A:T | donor_loss | 1.0000 |
| 1:169726698:C:CT | donor_loss | 1.0000 |
| 1:169726804:GAG:G | acceptor_gain | 1.0000 |
| 1:169726806:GC:G | acceptor_loss | 1.0000 |
| 1:169726807:C:CC | acceptor_gain | 1.0000 |
| 1:169726807:C:CG | acceptor_loss | 1.0000 |
| 1:169727347:A:C | donor_loss | 1.0000 |
| 1:169727348:C:CA | donor_loss | 1.0000 |
| 1:169727526:C:CC | acceptor_gain | 1.0000 |
| 1:169729181:CTTA:C | donor_loss | 1.0000 |
| 1:169729182:TTACC:T | donor_loss | 1.0000 |
| 1:169729183:TACCT:T | donor_loss | 1.0000 |
| 1:169729184:A:AC | donor_gain | 1.0000 |
| 1:169729185:C:CC | donor_gain | 1.0000 |
| 1:169729370:CACAG:C | acceptor_gain | 1.0000 |
| 1:169729371:ACAG:A | acceptor_gain | 1.0000 |
| 1:169729372:CAG:C | acceptor_gain | 1.0000 |
AlphaMissense
4022 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:169732661:C:A | W125C | 0.998 |
| 1:169732661:C:G | W125C | 0.998 |
| 1:169732663:A:G | W125R | 0.997 |
| 1:169732663:A:T | W125R | 0.997 |
| 1:169732745:C:A | W97C | 0.997 |
| 1:169732745:C:G | W97C | 0.997 |
| 1:169732623:C:G | C138S | 0.996 |
| 1:169732624:A:T | C138S | 0.996 |
| 1:169732823:C:A | W71C | 0.995 |
| 1:169732823:C:G | W71C | 0.995 |
| 1:169732704:C:G | C111S | 0.994 |
| 1:169732705:A:T | C111S | 0.994 |
| 1:169732917:C:G | C40S | 0.994 |
| 1:169732918:A:T | C40S | 0.994 |
| 1:169732793:C:A | W81C | 0.993 |
| 1:169732793:C:G | W81C | 0.993 |
| 1:169732916:A:C | C40W | 0.993 |
| 1:169732622:G:C | C138W | 0.992 |
| 1:169732624:A:G | C138R | 0.992 |
| 1:169732705:A:G | C111R | 0.992 |
| 1:169731903:C:G | C154S | 0.991 |
| 1:169731904:A:T | C154S | 0.991 |
| 1:169732647:C:G | C130S | 0.991 |
| 1:169732648:A:T | C130S | 0.991 |
| 1:169728083:C:A | W418C | 0.990 |
| 1:169728083:C:G | W418C | 0.990 |
| 1:169732747:A:G | W97R | 0.990 |
| 1:169732747:A:T | W97R | 0.990 |
| 1:169732860:A:G | L59P | 0.990 |
| 1:169729211:C:A | W355C | 0.989 |
dbSNP variants (sampled 300 via entrez): RS1000173481 (1:169727068 C>T), RS1000690421 (1:169731381 G>A,T), RS1000718380 (1:169724042 A>C), RS1000725733 (1:169731078 G>C), RS1000749586 (1:169724407 A>G), RS1001391451 (1:169727315 A>G,T), RS1001750675 (1:169727741 T>C), RS1001877461 (1:169732327 A>G), RS1001951376 (1:169733616 T>C,G), RS1002130743 (1:169733939 G>A), RS1002183292 (1:169735068 G>A), RS1002630891 (1:169728961 T>A), RS1002637015 (1:169722627 C>G), RS1002739939 (1:169735282 CT>C,CTTTTT), RS1002748426 (1:169729176 T>C)
Disease associations
OMIM: gene MIM:131210 | disease phenotypes: MIM:161950
GenCC curated gene-disease
Mondo (2): IgA nephropathy, susceptibility to (MONDO:0100555), coronary artery disorder (MONDO:0005010)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
4 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003043_84 | Inflammatory bowel disease | 3.000000e-08 |
| GCST006585_2667 | Blood protein levels | 8.000000e-07 |
| GCST90002393_165 | Monocyte count | 5.000000e-12 |
| GCST90002394_90 | Monocyte percentage of white cells | 4.000000e-11 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005091 | monocyte count |
| EFO:0007989 | monocyte percentage of leukocytes |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D003324 | Coronary Artery Disease | C14.280.647.250.260; C14.907.137.126.339; C14.907.585.250.260 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL3831288 (PROTEIN FAMILY), CHEMBL3890 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 145 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL3707446 | RIVIPANSEL | 3 | 145 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
1 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs3917412 | Efficacy | 3 | capecitabine;fluorouracil;leucovorin;oxaliplatin | Colonic Neoplasms |
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs3917412 | SELE | 3 | 2.25 | 1 | capecitabine;fluorouracil;leucovorin;oxaliplatin |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: other protein — CD molecules
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| uproleselan | Antagonist | 5.76 | pIC50 |
ChEMBL bioactivities
171 potent at pChembl≥5 of 216 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.15 | IC50 | 0.7 | nM | CHEMBL119501 |
| 9.00 | IC50 | 1 | nM | CHEMBL119733 |
| 8.70 | IC50 | 2 | nM | CHEMBL118113 |
| 8.70 | IC50 | 2 | nM | CHEMBL325184 |
| 8.55 | IC50 | 2.8 | nM | CHEMBL119335 |
| 8.52 | IC50 | 3 | nM | CHEMBL117198 |
| 8.40 | IC50 | 4 | nM | CHEMBL117279 |
| 8.40 | IC50 | 4 | nM | CHEMBL119039 |
| 8.40 | IC50 | 4 | nM | CHEMBL116070 |
| 8.30 | IC50 | 5 | nM | CHEMBL266198 |
| 8.30 | IC50 | 5 | nM | CHEMBL117894 |
| 8.30 | IC50 | 5 | nM | CHEMBL117746 |
| 8.30 | IC50 | 5 | nM | CHEMBL118034 |
| 8.30 | IC50 | 5 | nM | CHEMBL117668 |
| 8.30 | IC50 | 5 | nM | CHEMBL117279 |
| 8.22 | IC50 | 6 | nM | CHEMBL326120 |
| 8.22 | IC50 | 6 | nM | CHEMBL117279 |
| 8.22 | IC50 | 6 | nM | CHEMBL118518 |
| 8.22 | IC50 | 6 | nM | CHEMBL116070 |
| 8.22 | IC50 | 6 | nM | CHEMBL116152 |
| 8.15 | IC50 | 7 | nM | CHEMBL326271 |
| 8.15 | IC50 | 7 | nM | CHEMBL331584 |
| 8.10 | IC50 | 8 | nM | CHEMBL118074 |
| 8.10 | IC50 | 8 | nM | CHEMBL118886 |
| 8.05 | IC50 | 9 | nM | CHEMBL115637 |
| 7.92 | IC50 | 12 | nM | CHEMBL268567 |
| 7.89 | IC50 | 13 | nM | CHEMBL267125 |
| 7.89 | IC50 | 13 | nM | CHEMBL116363 |
| 7.89 | IC50 | 13 | nM | CHEMBL326771 |
| 7.80 | IC50 | 16 | nM | CHEMBL119183 |
| 7.75 | IC50 | 18 | nM | CHEMBL115971 |
| 7.72 | IC50 | 19 | nM | CHEMBL116089 |
| 7.70 | IC50 | 20 | nM | CHEMBL267678 |
| 7.70 | IC50 | 20 | nM | CHEMBL118074 |
| 7.70 | IC50 | 20 | nM | CHEMBL117453 |
| 7.70 | IC50 | 20 | nM | CHEMBL116307 |
| 7.70 | IC50 | 20 | nM | CHEMBL267456 |
| 7.68 | IC50 | 21 | nM | CHEMBL118299 |
| 7.60 | IC50 | 25 | nM | CHEMBL115966 |
| 7.60 | IC50 | 25 | nM | CHEMBL118074 |
| 7.60 | IC50 | 25 | nM | CHEMBL419046 |
| 7.55 | IC50 | 28 | nM | CHEMBL116454 |
| 7.55 | IC50 | 28 | nM | CHEMBL118022 |
| 7.52 | IC50 | 30 | nM | CHEMBL119732 |
| 7.51 | IC50 | 31 | nM | CHEMBL118089 |
| 7.51 | IC50 | 31 | nM | CHEMBL119091 |
| 7.50 | IC50 | 32 | nM | CHEMBL269598 |
| 7.47 | IC50 | 34 | nM | CHEMBL325651 |
| 7.46 | IC50 | 35 | nM | CHEMBL117093 |
| 7.46 | IC50 | 35 | nM | CHEMBL117936 |
PubChem BioAssay actives
150 with measured affinity, of 586 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| N-methyl-4-[4-(trifluoromethyl)phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0007 | uM |
| 4-(4-ethenylphenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0010 | uM |
| 4-[4-(oxan-2-yloxymethyl)phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0020 | uM |
| 4-(4-imidazol-1-ylphenoxy)-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0020 | uM |
| 4-[4-[3-hydroxy-3-[4-[2-(methylcarbamoyl)thieno[2,3-c]pyridin-4-yl]oxyphenyl]butanoyl]phenoxy]-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0028 | uM |
| 4-(4-cyanophenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0030 | uM |
| N-methyl-4-(4-pyrazol-1-ylphenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0040 | uM |
| 4-[4-[2-(2-methoxyethoxy)ethoxymethyl]phenoxy]-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202426: In vitro inhibitory potency compared to TNF-alpha induced Selectin E in human endothelial cells (ELISA assay) | ic50 | 0.0040 | uM |
| 4-(4-bromophenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0040 | uM |
| 4-[4-(furan-2-yl)phenoxy]-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0050 | uM |
| N-methyl-4-(4-thiophen-2-ylphenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0050 | uM |
| 4-[4-(2-methoxyethoxymethyl)phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0050 | uM |
| 4-[4-[2-(2-methoxyethoxy)ethoxymethyl]phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0050 | uM |
| 4-(4-bromophenyl)sulfanylthieno[2,3-c]pyridine-2-carboxamide | 202427: In vitro potency against TNF alpha induced expression of Selectin E on human vascular endothelial cells using CAM ELISA assay | ic50 | 0.0050 | uM |
| 4-(4-iodophenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0060 | uM |
| 4-(4-imidazol-1-ylphenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0060 | uM |
| 4-(4-chlorophenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0060 | uM |
| 4-(4-bromophenoxy)-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0070 | uM |
| 4-[4-(2-methoxyethoxymethyl)phenoxy]-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0070 | uM |
| 4-(4-chloro-3-fluorophenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0080 | uM |
| 4-(4-chlorophenoxy)-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0080 | uM |
| N-methyl-4-(4-phenylphenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0090 | uM |
| 4-(4-chlorophenyl)sulfanylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0120 | uM |
| 4-(3,4-dimethylphenyl)sulfanylthieno[2,3-c]pyridine-2-carboxamide | 202427: In vitro potency against TNF alpha induced expression of Selectin E on human vascular endothelial cells using CAM ELISA assay | ic50 | 0.0130 | uM |
| 4-[4-(methoxymethyl)phenoxy]-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0130 | uM |
| 4-[4-[(E)-N’-hydroxycarbamimidoyl]phenoxy]-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0130 | uM |
| 4-[4-(methoxymethyl)phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0160 | uM |
| 4-(4-cyanophenoxy)-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0180 | uM |
| 4-[4-(trifluoromethyl)phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0190 | uM |
| ethyl 4-(2-carbamoylthieno[2,3-c]pyridin-4-yl)oxybenzoate | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0200 | uM |
| 4-(4-methylphenyl)sulfanylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0200 | uM |
| 4-(4-methylphenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0200 | uM |
| 4-phenylsulfanylthieno[2,3-c]pyridine-2-carboxamide | 202427: In vitro potency against TNF alpha induced expression of Selectin E on human vascular endothelial cells using CAM ELISA assay | ic50 | 0.0200 | uM |
| 4-(4-acetylphenoxy)-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0210 | uM |
| 4-[4-[(E)-3-morpholin-4-yl-3-oxoprop-1-enyl]phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0250 | uM |
| 4-[4-(hydroxymethyl)phenoxy]-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0250 | uM |
| 4-[4-(hydroxymethyl)phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0280 | uM |
| N-methyl-4-[4-[5-(trifluoromethyl)-1,2,4-oxadiazol-3-yl]phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0280 | uM |
| 4-(4-ethylphenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0300 | uM |
| 4-[4-[1-(hydroxymethyl)cyclopropyl]phenoxy]-N-methylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0310 | uM |
| 4-(4-chlorophenoxy)-N-ethylthieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0310 | uM |
| 4-(4-methylphenyl)sulfanylthieno[2,3-c]pyridine-2-carbohydrazide | 202427: In vitro potency against TNF alpha induced expression of Selectin E on human vascular endothelial cells using CAM ELISA assay | ic50 | 0.0320 | uM |
| 4-[4-[(E)-3-(2-morpholin-4-ylethylamino)-3-oxoprop-1-enyl]phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0340 | uM |
| 4-(4-aminophenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0350 | uM |
| N-methyl-4-(4-morpholin-4-ylphenoxy)thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0350 | uM |
| N-methyl-4-[4-[(E)-3-(2-morpholin-4-ylethylamino)-3-oxoprop-1-enyl]phenoxy]thieno[2,3-c]pyridine-2-carboxamide | 202422: Inhibition of selectin E in human endothelial cells | ic50 | 0.0430 | uM |
| 4-(2,4-dimethylphenyl)sulfanylthieno[2,3-c]pyridine-2-carboxamide | 202427: In vitro potency against TNF alpha induced expression of Selectin E on human vascular endothelial cells using CAM ELISA assay | ic50 | 0.0430 | uM |
| 4-[4-(trifluoromethyl)phenyl]sulfanylthieno[2,3-c]pyridine-2-carboxamide | 202427: In vitro potency against TNF alpha induced expression of Selectin E on human vascular endothelial cells using CAM ELISA assay | ic50 | 0.0440 | uM |
| 4-(3-methylphenyl)sulfanylthieno[2,3-c]pyridine-2-carboxamide | 202427: In vitro potency against TNF alpha induced expression of Selectin E on human vascular endothelial cells using CAM ELISA assay | ic50 | 0.0450 | uM |
| 5-methoxy-3-propan-2-yloxy-1-benzothiophene-2-carboxamide | 202427: In vitro potency against TNF alpha induced expression of Selectin E on human vascular endothelial cells using CAM ELISA assay | ic50 | 0.0500 | uM |
CTD chemical–gene interactions
182 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| lipopolysaccharide, Escherichia coli O111 B4 | increases expression, affects cotreatment, affects reaction, decreases reaction | 6 |
| Glucose | decreases reaction, increases expression, increases secretion, affects reaction | 6 |
| Lipopolysaccharides | increases reaction, decreases reaction, affects reaction, affects cotreatment, increases expression | 6 |
| Quercetin | affects cotreatment, decreases reaction, increases expression | 5 |
| Simvastatin | decreases expression, decreases reaction, increases expression, increases reaction, affects expression | 4 |
| Particulate Matter | decreases reaction, increases expression, affects expression, increases reaction, increases abundance | 4 |
| titanium dioxide | decreases reaction, increases expression | 3 |
| Resveratrol | increases expression, decreases expression, affects reaction, decreases reaction | 3 |
| Benzo(a)pyrene | decreases expression, increases expression, increases methylation, affects methylation | 3 |
| Smoke | increases expression, decreases reaction, decreases nitrosation, affects reaction | 3 |
| kaempferol | affects cotreatment, decreases reaction, increases expression | 2 |
| cyanidin-3-O-beta-glucopyranoside | increases expression, decreases reaction | 2 |
| aspalathin | decreases reaction, increases expression | 2 |
| nothofagin | decreases reaction, increases expression | 2 |
| dabrafenib | decreases reaction, increases expression | 2 |
| Lycopene | affects cotreatment, decreases reaction, increases expression | 2 |
| Acetylcysteine | decreases reaction, increases expression, decreases expression | 2 |
| Vehicle Emissions | affects expression, increases abundance, increases expression | 2 |
| Curcumin | decreases reaction, increases expression, affects expression | 2 |
| Hydrogen Peroxide | increases secretion, increases expression, decreases reaction | 2 |
| Polyphosphates | decreases reaction, increases expression | 2 |
| Silicon Dioxide | decreases reaction, increases expression | 2 |
| Triterpenes | increases expression, decreases reaction | 2 |
| Sertraline | decreases expression | 2 |
| alpha-Tocopherol | decreases reaction, increases expression, affects cotreatment | 2 |
| Apigenin | increases expression, decreases reaction | 2 |
| tetrachlorobenzoquinone | increases reaction, decreases reaction, increases expression | 1 |
| peracetylated N-azidoacetylmannosamine | decreases expression | 1 |
| parthenolide | decreases expression | 1 |
| neocuproine | affects abundance, decreases reaction, increases expression | 1 |
ChEMBL screening assays
118 unique, capped per target: 108 binding, 10 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1071032 | Binding | Ratio of compound IC50 to sialyl Lewis X IC50 for E-selectin by ELISA | Probing the carbohydrate recognition domain of E-selectin: the importance of the acid orientation in sLex mimetics. — Bioorg Med Chem |
| CHEMBL3214900 | Functional | PubChem BioAssay. Identification of agents that induce E-selectin on human endothelial cells Measured in Cell-Based System Using Imaging - 2152-01_Activator_Dose_CherryPick_Activity. (absACnn = the concentration at which the curve crosses t | PubChem BioAssay data set |
Cellosaurus cell lines
2 cell lines: 1 spontaneously immortalized cell line, 1 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A1BC | CHO Pro-5-Esel | Spontaneously immortalized cell line | Female |
| CVCL_E4JI | L1-2/pMRB107 | Cancer cell line |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00025766 | PHASE4 | COMPLETED | Angioplasty and Heart Stents to Treat Individuals With an Occluded Artery Following a Heart Attack |
| NCT00079638 | PHASE4 | COMPLETED | Comparative Efficacy Evaluation of Lipids When Treated With Niaspan & Statin or Other Lipid-Modifying Therapies-COMPELL |
| NCT00110448 | PHASE4 | COMPLETED | Japanese Primary Prevention of Atherosclerosis With Aspirin for Diabetes (JPAD) Trial |
| NCT00111566 | PHASE4 | COMPLETED | BRIEF-PCI: Brief Infusion of Eptifibatide Following Percutaneous Coronary Intervention |
| NCT00129038 | PHASE4 | COMPLETED | Modified-release Dipyridamole/Aspirin (200mg/25mg bd) Versus Aspirin (75mg) in Aspirin-resistant Patients |
| NCT00133003 | PHASE4 | COMPLETED | Abciximab, Clopidogrel and Percutaneous Coronary Intervention in Acute Coronary Syndrome (ISAR-REACT-2) |
| NCT00133237 | PHASE4 | COMPLETED | Drug-eluting-stents for Unprotected Left Main Stem Disease (ISAR-LEFT-MAIN) |
| NCT00133692 | PHASE4 | COMPLETED | INVEST: INternational VErapamil SR Trandolapril STudy |
| NCT00139386 | PHASE4 | COMPLETED | Candesartan for Prevention of Cardiovascular Events After Cypher or Taxus Coronary Stenting (4C) Trial |
| NCT00140465 | PHASE4 | COMPLETED | 75 or 150 mg Clopidogrel Maintenance Doses Following PCI (ISAR-CHOICE-2) |
| NCT00140530 | PHASE4 | COMPLETED | Nonpolymer- and Polymer-Based Drug-Eluting Stents for Restenosis (ISAR-TEST-1) |
| NCT00146575 | PHASE4 | COMPLETED | Sirolimus- and Paclitaxel-Eluting Stents for Small Vessels (ISAR-SMART-3) |
| NCT00152308 | PHASE4 | TERMINATED | Non-Polymer-Based, Rapamycin-Eluting Stents to Prevent Restenosis |
| NCT00155350 | PHASE4 | UNKNOWN | Treatment of Coronary Atherosclerosis by Insulin Sensitizers in Insulin-Resistant Patients |
| NCT00162370 | PHASE4 | COMPLETED | A Study of Stress Echocardiography in Post-Menopausal Women at Risk for Coronary Disease |
| NCT00163202 | PHASE4 | COMPLETED | Comparative Atorvastatin Pleiotropic Effects |
| NCT00169819 | PHASE4 | COMPLETED | EArly Discharge After Transradial Stenting of CoronarY Arteries: The EASY Study |
| NCT00171275 | PHASE4 | COMPLETED | Fluvastatin in the Therapy of Acute Coronary Syndrome |
| NCT00175240 | PHASE4 | COMPLETED | Enhancing the Secondary Prevention of Coronary Artery Disease |
| NCT00180388 | PHASE4 | TERMINATED | VENEK: Healing in Different Vein Harvesting Methods During Aortocoronary Coronary Artery Bypass Graft Surgery (CABG) |
| NCT00180583 | PHASE4 | COMPLETED | Vision II: Evaluation of GALILEO Intravascular Radiotherapy System |
| NCT00189215 | PHASE4 | COMPLETED | Long-Term Cognitive Decline After Coronary Artery Bypass Grafting: is Off-Pump Surgery Beneficial? |
| NCT00200629 | PHASE4 | TERMINATED | Both Exercise and Adenosine Stress Testing |
| NCT00202904 | PHASE4 | COMPLETED | Effectiveness and Safety of Ezetimibe Added to Atorvastatin in Patients With High Cholesterol and Coronary Heart Disease (Study P03740) |
| NCT00209404 | PHASE4 | COMPLETED | Iodixanol in Multidetector-Row Computed Tomography-Coronary Angiography (MDCT-CA) |
| NCT00209430 | PHASE4 | COMPLETED | Renal Effects of Two Iodinated Contrast Media in Patients at Risk Undergoing Coronary Angiography |
| NCT00220558 | PHASE4 | UNKNOWN | GISSOC II: Sirolimus Eluting Stent Versus Bare Metal Stent in Chronic Total Coronary Occlusions |
| NCT00222261 | PHASE4 | COMPLETED | Aspirin Non-responsiveness and Clopidogrel Endpoint Trial. |
| NCT00229528 | PHASE4 | COMPLETED | Effect of Paroxetine on COAT-Platelet Production in Normal Volunteers and Patients With Cardiovascular Disease |
| NCT00232804 | PHASE4 | COMPLETED | The BRIDGE Registry: Safety and Efficacy Registry of Bx Cypher Stent |
| NCT00232856 | PHASE4 | COMPLETED | A Study of the Cypher SES to Treat Restenotic Native Coronary Artery Lesions. |
| NCT00235066 | PHASE4 | COMPLETED | The CYPHER™ Stent Study in Patients With Small de Novo Coronary Artery Lesions. |
| NCT00235092 | PHASE4 | COMPLETED | The REALITY Study - Head-to-Head Comparison Between Cypher and Taxus |
| NCT00235950 | PHASE4 | COMPLETED | Assessment of the Lipid Lowering Effect of Rosuvastatin Compared to Atorvastatin in Subjects With Coronary Heart Disease |
| NCT00238004 | PHASE4 | UNKNOWN | The Low HDL On Six Weeks Statin Therapy (LOW) Study |
| NCT00241904 | PHASE4 | COMPLETED | Reducing Total Cardiovascular Risk in an Urban Community |
| NCT00242944 | PHASE4 | COMPLETED | Japan Assessment of Pitavastatin and Atorvastatin in Acute Coronary Syndrome (JAPAN-ACS) |
| NCT00243477 | PHASE4 | COMPLETED | MOTIV Study- Effect of Antidepressive Treatment by Escitalopram in Patients Undergoing Coronary Artery Bypass Grafting |
| NCT00244530 | PHASE4 | COMPLETED | Prophylactic Effect of Nifedipine on Further Decline in Renal Function in Patients Undergoing Open-Heart Surgery |
| NCT00245401 | PHASE4 | COMPLETED | CYPHERTM Stent Post-Marketing Surveillance Registry (US-PMS) |
Related Atlas pages
- Targeted by drugs: Uproleselan
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): coronary artery disorder, IgA nephropathy, susceptibility to, inflammatory bowel disease