SERTAD4-AS1
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Summary
SERTAD4-AS1 (SERTAD4 antisense RNA 1, HGNC:32019) is a long non-coding RNA gene on chromosome 1q32.2.
At a glance
- Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:32019 |
| Approved symbol | SERTAD4-AS1 |
| Name | SERTAD4 antisense RNA 1 |
| Location | 1q32.2 |
| Locus type | RNA, long non-coding |
| Status | Approved |
| Ensembl gene | ENSG00000203706 |
| Ensembl biotype | lncRNA |
| Entrez | 574036 |
| RNAcentral | URS0000D77F5A — lncRNA, 567 nt, 1 organism(s) |
Gene structure
Transcript identifiers
Ensembl transcripts: 10 — 10 lncRNA
ENST00000437764, ENST00000475406, ENST00000480052, ENST00000703020, ENST00000848819, ENST00000848820, ENST00000848821, ENST00000848822, ENST00000848823, ENST00000848824
RefSeq mRNA: 0 — MANE Select: None
Canonical transcript exons
ENST00000437764 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001644319 | 210233635 | 210234044 |
| ENSE00003020397 | 210231456 | 210231771 |
Expression profiles
Bgee: expression breadth ubiquitous, 131 present calls, max score 94.11.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 4.9912 / max 133.2682, expressed in 1174 samples.
FANTOM5 promoters (8 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 17320 | 1.7917 | 809 |
| 17319 | 1.5234 | 697 |
| 17323 | 0.6724 | 350 |
| 17322 | 0.3540 | 173 |
| 17321 | 0.3247 | 127 |
| 17316 | 0.1956 | 97 |
| 17318 | 0.0711 | 10 |
| 17317 | 0.0584 | 21 |
Top tissues by expression
131 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| calcaneal tendon | UBERON:0003701 | 94.11 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 92.44 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 91.79 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 90.90 | gold quality |
| right uterine tube | UBERON:0001302 | 90.51 | gold quality |
| right coronary artery | UBERON:0001625 | 90.33 | gold quality |
| ascending aorta | UBERON:0001496 | 90.26 | gold quality |
| thoracic aorta | UBERON:0001515 | 90.24 | gold quality |
| myometrium | UBERON:0001296 | 90.22 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 90.07 | gold quality |
| body of uterus | UBERON:0009853 | 89.07 | gold quality |
| substantia nigra | UBERON:0002038 | 87.76 | gold quality |
| left coronary artery | UBERON:0001626 | 87.49 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 87.12 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 84.58 | gold quality |
| putamen | UBERON:0001874 | 84.52 | gold quality |
| corpus callosum | UBERON:0002336 | 84.14 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 84.04 | gold quality |
| fallopian tube | UBERON:0003889 | 83.71 | gold quality |
| left uterine tube | UBERON:0001303 | 83.37 | gold quality |
| colon | UBERON:0001155 | 83.32 | gold quality |
| popliteal artery | UBERON:0002250 | 83.24 | gold quality |
| tibial artery | UBERON:0007610 | 83.24 | gold quality |
| primary visual cortex | UBERON:0002436 | 82.91 | gold quality |
| nucleus accumbens | UBERON:0001882 | 82.53 | gold quality |
| hypothalamus | UBERON:0001898 | 82.09 | gold quality |
| caudate nucleus | UBERON:0001873 | 81.62 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 81.21 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 80.60 | gold quality |
| minor salivary gland | UBERON:0001830 | 80.45 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 4.50 |
Regulation
Is transcription factor: no
Cross-species orthologs
0 orthologs
Protein
Non-coding RNA — no protein product; not a drug target.
Function
No curated pathway, Gene-Ontology, or interaction data.
Disease & clinical
No curated disease, variant, or cancer-driver associations.
Drugs & pharmacology
No drug or pharmacology data — not an established drug target.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): alopecia areata