SH3D19-AS1

Summary

SH3D19-AS1 (SH3D19 antisense RNA 1, HGNC:58337) is a long non-coding RNA gene on chromosome 4q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58337
Approved symbol	SH3D19-AS1
Name	SH3D19 antisense RNA 1
Location	4q31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000270681
Ensembl biotype	lncRNA
Entrez	107986196

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000603472

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000603472 — 1 exons

Exon	Start	End
ENSE00003638577	151139991	151141103

Expression profiles

Bgee: expression breadth ubiquitous, 158 present calls, max score 79.77.

Top tissues by expression

237 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	79.77	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	79.31	gold quality
gastrocnemius	UBERON:0001388	76.90	gold quality
buccal mucosa cell	CL:0002336	76.50	gold quality
spinal cord	UBERON:0002240	76.08	gold quality
muscle of leg	UBERON:0001383	76.07	gold quality
mucosa of stomach	UBERON:0001199	75.30	gold quality
cortical plate	UBERON:0005343	74.99	gold quality
monocyte	CL:0000576	74.10	gold quality
leukocyte	CL:0000738	73.72	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	72.88	gold quality
ganglionic eminence	UBERON:0004023	71.95	gold quality
bone marrow cell	CL:0002092	70.94	silver quality
tibial artery	UBERON:0007610	70.53	gold quality
popliteal artery	UBERON:0002250	70.46	gold quality
islet of Langerhans	UBERON:0000006	70.36	gold quality
colonic epithelium	UBERON:0000397	69.99	gold quality
hindlimb stylopod muscle	UBERON:0004252	69.78	gold quality
sural nerve	UBERON:0015488	69.49	gold quality
myocardium	UBERON:0002349	69.12	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	68.23	gold quality
tibial nerve	UBERON:0001323	67.94	gold quality
ventricular zone	UBERON:0003053	67.45	gold quality
subcutaneous adipose tissue	UBERON:0002190	67.35	gold quality
cardiac muscle of right atrium	UBERON:0003379	66.98	gold quality
aorta	UBERON:0000947	66.97	gold quality
amygdala	UBERON:0001876	66.86	gold quality
left ventricle myocardium	UBERON:0006566	66.80	gold quality
substantia nigra	UBERON:0002038	66.67	gold quality
skin of leg	UBERON:0001511	66.59	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.67

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.