SH3GL1-AS1

Summary

SH3GL1-AS1 (SH3GL1 antisense RNA 1, HGNC:58592) is a long non-coding RNA gene on chromosome 19p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58592
Approved symbol	SH3GL1-AS1
Name	SH3GL1 antisense RNA 1
Location	19p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267980
Ensembl biotype	lncRNA
Entrez	142592825

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000594444

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000594444 — 2 exons

Exon	Start	End
ENSE00003167887	4363789	4364011
ENSE00003212088	4364118	4364640

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 82.52.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.52	silver quality
mucosa of transverse colon	UBERON:0004991	79.32	gold quality
right uterine tube	UBERON:0001302	77.69	gold quality
right hemisphere of cerebellum	UBERON:0014890	75.66	gold quality
lower esophagus mucosa	UBERON:0035834	75.30	gold quality
cerebellar hemisphere	UBERON:0002245	74.84	gold quality
cerebellar cortex	UBERON:0002129	74.77	gold quality
cerebellum	UBERON:0002037	74.74	gold quality
amygdala	UBERON:0001876	73.43	gold quality
temporal lobe	UBERON:0001871	73.40	gold quality
apex of heart	UBERON:0002098	73.25	gold quality
Ammon’s horn	UBERON:0001954	73.12	gold quality
cortical plate	UBERON:0005343	72.51	gold quality
right lobe of thyroid gland	UBERON:0001119	72.36	gold quality
right ovary	UBERON:0002118	72.35	gold quality
thyroid gland	UBERON:0002046	72.16	gold quality
left ovary	UBERON:0002119	72.16	gold quality
right frontal lobe	UBERON:0002810	72.05	gold quality
left lobe of thyroid gland	UBERON:0001120	71.94	gold quality
right lobe of liver	UBERON:0001114	71.77	gold quality
ectocervix	UBERON:0012249	71.77	gold quality
ovary	UBERON:0000992	71.69	gold quality
anterior cingulate cortex	UBERON:0009835	71.64	gold quality
uterine cervix	UBERON:0000002	71.28	gold quality
cerebral cortex	UBERON:0000956	70.74	gold quality
ganglionic eminence	UBERON:0004023	70.71	gold quality
brain	UBERON:0000955	70.59	gold quality
superior frontal gyrus	UBERON:0002661	70.56	gold quality
frontal cortex	UBERON:0001870	70.20	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	70.13	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.84

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.