SIPA1L1-AS1

Summary

SIPA1L1-AS1 (SIPA1L1 antisense RNA 1, HGNC:55432) is a long non-coding RNA gene on chromosome 14q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55432
Approved symbol	SIPA1L1-AS1
Name	SIPA1L1 antisense RNA 1
Location	14q24.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259146
Ensembl biotype	lncRNA
Entrez	102724015
RNAcentral	URS00026A2481 — lncRNA, 1246 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 29 — 29 lncRNA

ENST00000554634, ENST00000555771, ENST00000662547, ENST00000795324, ENST00000795325, ENST00000795326, ENST00000795327, ENST00000795328, ENST00000795329, ENST00000795330, ENST00000795331, ENST00000795332, ENST00000795333, ENST00000795334, ENST00000795335, ENST00000795336, ENST00000795337, ENST00000795338, ENST00000795339, ENST00000795340, ENST00000795341, ENST00000795342, ENST00000795343, ENST00000795344, ENST00000795345, ENST00000795346, ENST00000795347, ENST00000795348, ENST00000795349

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000554634 — 4 exons

Exon	Start	End
ENSE00002431674	71310558	71310679
ENSE00002503563	71307170	71307363
ENSE00004179923	71311212	71311376
ENSE00004179933	71321782	71321882

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 91.41.

Top tissues by expression

136 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
quadriceps femoris	UBERON:0001377	91.41	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.07	gold quality
right uterine tube	UBERON:0001302	85.75	gold quality
left testis	UBERON:0004533	82.69	gold quality
right testis	UBERON:0004534	82.21	gold quality
testis	UBERON:0000473	82.16	gold quality
thymus	UBERON:0002370	78.25	silver quality
cerebellar hemisphere	UBERON:0002245	78.09	gold quality
cerebellar cortex	UBERON:0002129	77.95	gold quality
cerebellum	UBERON:0002037	77.83	gold quality
right hemisphere of cerebellum	UBERON:0014890	77.62	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	76.93	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	76.38	gold quality
adenohypophysis	UBERON:0002196	74.85	gold quality
skin of leg	UBERON:0001511	74.82	gold quality
zone of skin	UBERON:0000014	74.79	gold quality
pituitary gland	UBERON:0000007	74.76	gold quality
skin of abdomen	UBERON:0001416	74.61	gold quality
amygdala	UBERON:0001876	74.56	gold quality
temporal lobe	UBERON:0001871	74.45	gold quality
Ammon’s horn	UBERON:0001954	74.16	gold quality
bone marrow cell	CL:0002092	73.97	gold quality
caudate nucleus	UBERON:0001873	73.97	gold quality
right frontal lobe	UBERON:0002810	73.93	gold quality
right lobe of liver	UBERON:0001114	73.71	gold quality
brain	UBERON:0000955	73.56	gold quality
fallopian tube	UBERON:0003889	73.51	gold quality
putamen	UBERON:0001874	73.40	gold quality
nucleus accumbens	UBERON:0001882	73.33	gold quality
anterior cingulate cortex	UBERON:0009835	73.27	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.