SKAP1-AS1

Summary

SKAP1-AS1 (SKAP1 antisense RNA 1, HGNC:53166) is a long non-coding RNA gene on chromosome 17q21.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53166
Approved symbol	SKAP1-AS1
Name	SKAP1 antisense RNA 1
Location	17q21.32
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-456D7.1
Ensembl gene	ENSG00000263787
Ensembl biotype	lncRNA
Entrez	110806289
RNAcentral	URS0000247522 — lncRNA, 687 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000582246

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000582246 — 3 exons

Exon	Start	End
ENSE00002700813	48185938	48186018
ENSE00002704084	48203992	48204529
ENSE00002721192	48203664	48203731

Expression profiles

Bgee: expression breadth ubiquitous, 112 present calls, max score 70.80.

Top tissues by expression

112 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	70.80	silver quality
ventricular zone	UBERON:0003053	63.54	gold quality
bone marrow	UBERON:0002371	62.63	gold quality
granulocyte	CL:0000094	61.51	gold quality
colonic epithelium	UBERON:0000397	60.97	silver quality
ganglionic eminence	UBERON:0004023	60.63	gold quality
blood	UBERON:0000178	58.03	gold quality
lymph node	UBERON:0000029	56.58	gold quality
skeletal muscle tissue	UBERON:0001134	56.47	gold quality
stromal cell of endometrium	CL:0002255	56.41	gold quality
monocyte	CL:0000576	53.68	gold quality
tonsil	UBERON:0002372	52.93	gold quality
placenta	UBERON:0001987	52.30	gold quality
muscle tissue	UBERON:0002385	52.21	gold quality
duodenum	UBERON:0002114	52.11	gold quality
adrenal tissue	UBERON:0018303	51.82	silver quality
endometrium	UBERON:0001295	51.11	silver quality
liver	UBERON:0002107	50.92	silver quality
islet of Langerhans	UBERON:0000006	50.85	gold quality
prefrontal cortex	UBERON:0000451	50.68	gold quality
calcaneal tendon	UBERON:0003701	49.82	silver quality
kidney	UBERON:0002113	49.78	gold quality
cortex of kidney	UBERON:0001225	49.07	gold quality
hindlimb stylopod muscle	UBERON:0004252	48.76	gold quality
adult mammalian kidney	UBERON:0000082	48.20	gold quality
pancreas	UBERON:0001264	47.91	gold quality
uterine cervix	UBERON:0000002	47.81	silver quality
muscle of leg	UBERON:0001383	47.72	gold quality
myometrium	UBERON:0001296	47.49	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	47.00	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.