SLC17A6-DT

Summary

SLC17A6-DT (SLC17A6 divergent transcript, HGNC:55514) is a long non-coding RNA gene on chromosome 11p14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55514
Approved symbol	SLC17A6-DT
Name	SLC17A6 divergent transcript
Location	11p14.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	lncRNA-Glu
Ensembl gene	ENSG00000254768
Ensembl biotype	lncRNA
Entrez	120883619
RNAcentral	URS00026A2627 — lncRNA, 612 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000528009, ENST00000530569, ENST00000531304, ENST00000665562

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000528009 — 4 exons

Exon	Start	End
ENSE00002163985	22305657	22305807
ENSE00002176707	22283730	22283824
ENSE00002183207	22337995	22338245
ENSE00002185793	22307237	22307374

Expression profiles

Bgee: expression breadth broad, 92 present calls, max score 83.97.

Top tissues by expression

92 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.97	silver quality
ganglionic eminence	UBERON:0004023	76.63	gold quality
islet of Langerhans	UBERON:0000006	73.27	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.28	silver quality
ventricular zone	UBERON:0003053	65.88	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.48	gold quality
skeletal muscle tissue	UBERON:0001134	62.05	gold quality
hypothalamus	UBERON:0001898	61.53	gold quality
pancreas	UBERON:0001264	61.48	gold quality
prefrontal cortex	UBERON:0000451	59.84	gold quality
pituitary gland	UBERON:0000007	58.97	gold quality
monocyte	CL:0000576	57.81	gold quality
primary visual cortex	UBERON:0002436	57.54	gold quality
adenohypophysis	UBERON:0002196	57.38	gold quality
sural nerve	UBERON:0015488	56.96	silver quality
superior frontal gyrus	UBERON:0002661	56.45	gold quality
apex of heart	UBERON:0002098	56.15	gold quality
muscle of leg	UBERON:0001383	55.95	gold quality
gastrocnemius	UBERON:0001388	55.32	gold quality
cortex of kidney	UBERON:0001225	55.22	gold quality
frontal cortex	UBERON:0001870	54.48	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	53.39	gold quality
cerebral cortex	UBERON:0000956	53.10	gold quality
Brodmann (1909) area 9	UBERON:0013540	53.00	gold quality
brain	UBERON:0000955	52.79	gold quality
amygdala	UBERON:0001876	51.95	gold quality
blood	UBERON:0000178	51.38	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.98	gold quality
Ammon’s horn	UBERON:0001954	50.48	gold quality
heart left ventricle	UBERON:0002084	49.46	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.78

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.