SLC18A2-AS1

Summary

SLC18A2-AS1 (SLC18A2 antisense RNA 1, HGNC:55843) is a long non-coding RNA gene on chromosome 10q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55843
Approved symbol	SLC18A2-AS1
Name	SLC18A2 antisense RNA 1
Location	10q25.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225936
Ensembl biotype	lncRNA
Entrez	105378500
RNAcentral	URS00026A1EC0 — lncRNA, 1530 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000425264, ENST00000691914, ENST00000758985, ENST00000758986, ENST00000758987, ENST00000758988, ENST00000758989, ENST00000758990, ENST00000758991, ENST00000758992, ENST00000758993

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000425264 — 3 exons

Exon	Start	End
ENSE00001642791	117241661	117241783
ENSE00001662370	117238762	117240181
ENSE00004111377	117241885	117242032

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 92.45.

Top tissues by expression

106 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
monocyte	CL:0000576	92.45	gold quality
leukocyte	CL:0000738	90.93	gold quality
blood	UBERON:0000178	72.23	gold quality
granulocyte	CL:0000094	72.21	gold quality
bone marrow cell	CL:0002092	68.06	silver quality
colonic epithelium	UBERON:0000397	66.18	silver quality
bone marrow	UBERON:0002371	63.05	gold quality
right lung	UBERON:0002167	59.12	gold quality
islet of Langerhans	UBERON:0000006	57.59	gold quality
rectum	UBERON:0001052	57.53	gold quality
lung	UBERON:0002048	57.38	gold quality
mucosa of stomach	UBERON:0001199	57.03	gold quality
fundus of stomach	UBERON:0001160	56.33	gold quality
upper lobe of left lung	UBERON:0008952	56.21	gold quality
skeletal muscle tissue	UBERON:0001134	55.94	gold quality
muscle tissue	UBERON:0002385	55.25	gold quality
endometrium	UBERON:0001295	55.10	gold quality
duodenum	UBERON:0002114	54.74	gold quality
gall bladder	UBERON:0002110	54.45	gold quality
lower esophagus muscularis layer	UBERON:0035833	54.18	gold quality
lower esophagus	UBERON:0013473	54.16	gold quality
ectocervix	UBERON:0012249	53.87	gold quality
vermiform appendix	UBERON:0001154	53.47	gold quality
liver	UBERON:0002107	53.37	gold quality
substantia nigra	UBERON:0002038	53.19	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	53.18	gold quality
multicellular organism	UBERON:0000468	52.86	gold quality
pancreas	UBERON:0001264	52.42	gold quality
urinary bladder	UBERON:0001255	51.93	gold quality
stomach	UBERON:0000945	51.91	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.76

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.