SLC1A2-AS1

Summary

SLC1A2-AS1 (SLC1A2 antisense RNA 1, HGNC:40534) is a long non-coding RNA gene on chromosome 11p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40534
Approved symbol	SLC1A2-AS1
Name	SLC1A2 antisense RNA 1
Location	11p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255004
Ensembl biotype	lncRNA
Entrez	107984324
RNAcentral	URS0002A66541 — lncRNA, 1393 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000532760, ENST00000844195, ENST00000844196, ENST00000844197

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000532760 — 2 exons

Exon	Start	End
ENSE00002157828	35285337	35286009
ENSE00002198399	35281813	35281915

Expression profiles

Bgee: expression breadth broad, 71 present calls, max score 77.97.

Top tissues by expression

71 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
adrenal tissue	UBERON:0018303	77.97	gold quality
tonsil	UBERON:0002372	75.07	gold quality
ventricular zone	UBERON:0003053	63.29	gold quality
corpus callosum	UBERON:0002336	62.66	gold quality
liver	UBERON:0002107	61.47	gold quality
ganglionic eminence	UBERON:0004023	60.81	gold quality
bone marrow	UBERON:0002371	56.71	gold quality
calcaneal tendon	UBERON:0003701	56.53	gold quality
monocyte	CL:0000576	54.97	gold quality
superior frontal gyrus	UBERON:0002661	54.62	gold quality
adrenal gland	UBERON:0002369	54.06	gold quality
islet of Langerhans	UBERON:0000006	51.58	gold quality
prefrontal cortex	UBERON:0000451	51.55	gold quality
blood	UBERON:0000178	50.75	gold quality
lung	UBERON:0002048	49.50	gold quality
saliva-secreting gland	UBERON:0001044	49.35	gold quality
pancreas	UBERON:0001264	48.86	gold quality
placenta	UBERON:0001987	48.85	gold quality
body of pancreas	UBERON:0001150	47.78	gold quality
primary visual cortex	UBERON:0002436	47.41	gold quality
right lobe of liver	UBERON:0001114	47.03	silver quality
caudate nucleus	UBERON:0001873	46.09	gold quality
frontal cortex	UBERON:0001870	46.07	gold quality
brain	UBERON:0000955	45.54	gold quality
tibial artery	UBERON:0007610	45.46	silver quality
nucleus accumbens	UBERON:0001882	45.21	gold quality
cerebral cortex	UBERON:0000956	45.14	gold quality
putamen	UBERON:0001874	44.97	gold quality
gastrocnemius	UBERON:0001388	44.94	silver quality
anterior cingulate cortex	UBERON:0009835	44.86	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.