SLC22A6
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Also known as ROAT1PAHTOAT1
Summary
SLC22A6 (solute carrier family 22 member 6, HGNC:10970) is a protein-coding gene on chromosome 11q12.3, encoding Solute carrier family 22 member 6 (Q4U2R8). Secondary active transporter that functions as a Na(+)-independent organic anion (OA)/dicarboxylate antiporter where the uptake of one molecule of OA into the cell is coupled with an efflux of one molecule of intracellular dicarboxylate such as 2-oxoglutarate or glutarate.
The protein encoded by this gene is involved in the sodium-dependent transport and excretion of organic anions, some of which are potentially toxic. The encoded protein is an integral membrane protein and may be localized to the basolateral membrane. Four transcript variants encoding four different isoforms have been found for this gene.
Source: NCBI Gene 9356 — RefSeq curated summary.
At a glance
- GWAS associations: 2
- Clinical variants (ClinVar): 87 total
- Druggable target: yes — 32 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_153276
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:10970 |
| Approved symbol | SLC22A6 |
| Name | solute carrier family 22 member 6 |
| Location | 11q12.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | ROAT1, PAHT, OAT1 |
| Ensembl gene | ENSG00000197901 |
| Ensembl biotype | protein_coding |
| OMIM | 607582 |
| Entrez | 9356 |
Gene structure
Transcript identifiers
Ensembl transcripts: 7 — 5 protein_coding, 1 protein_coding_CDS_not_defined, 1 nonsense_mediated_decay
ENST00000360421, ENST00000377871, ENST00000421062, ENST00000458333, ENST00000537349, ENST00000540654, ENST00000856538
RefSeq mRNA: 4 — MANE Select: NM_153276
NM_004790, NM_153276, NM_153277, NM_153278
CCDS: CCDS31591, CCDS44631, CCDS44632, CCDS8041
Canonical transcript exons
ENST00000360421 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001350481 | 62983944 | 62984047 |
| ENSE00001388285 | 62984322 | 62984967 |
| ENSE00001519126 | 62976597 | 62976881 |
| ENSE00003523144 | 62979488 | 62979596 |
| ENSE00003525889 | 62979734 | 62979948 |
| ENSE00003548511 | 62981842 | 62982010 |
| ENSE00003561177 | 62983537 | 62983691 |
| ENSE00003575189 | 62977184 | 62977387 |
| ENSE00003609081 | 62980985 | 62981100 |
| ENSE00003690145 | 62981260 | 62981383 |
Expression profiles
Bgee: expression breadth broad, 63 present calls, max score 93.93.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.6831 / max 286.8650, expressed in 89 samples.
FANTOM5 promoters (7 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 120269 | 0.2990 | 10 |
| 120266 | 0.1966 | 80 |
| 120267 | 0.1130 | 46 |
| 120265 | 0.0351 | 20 |
| 120271 | 0.0147 | 9 |
| 120268 | 0.0142 | 8 |
| 120270 | 0.0105 | 6 |
Top tissues by expression
271 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| adult mammalian kidney | UBERON:0000082 | 93.93 | gold quality |
| nephron tubule | UBERON:0001231 | 92.49 | gold quality |
| kidney epithelium | UBERON:0004819 | 91.69 | gold quality |
| adult organism | UBERON:0007023 | 90.94 | gold quality |
| renal glomerulus | UBERON:0000074 | 88.88 | gold quality |
| metanephric glomerulus | UBERON:0004736 | 88.87 | gold quality |
| kidney | UBERON:0002113 | 88.29 | gold quality |
| renal medulla | UBERON:0000362 | 82.96 | gold quality |
| cortex of kidney | UBERON:0001225 | 82.16 | gold quality |
| metanephros | UBERON:0000081 | 79.10 | gold quality |
| buccal mucosa cell | CL:0002336 | 78.71 | silver quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 78.02 | gold quality |
| endometrium epithelium | UBERON:0004811 | 74.71 | gold quality |
| superficial temporal artery | UBERON:0001614 | 74.03 | gold quality |
| dorsal motor nucleus of vagus nerve | UBERON:0002870 | 73.67 | silver quality |
| gluteal muscle | UBERON:0002000 | 73.08 | gold quality |
| inferior olivary complex | UBERON:0002127 | 72.57 | gold quality |
| triceps brachii | UBERON:0001509 | 72.32 | gold quality |
| pigmented layer of retina | UBERON:0001782 | 71.14 | gold quality |
| diaphragm | UBERON:0001103 | 71.05 | gold quality |
| type B pancreatic cell | CL:0000169 | 70.51 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 70.30 | gold quality |
| substantia nigra | UBERON:0002038 | 70.22 | gold quality |
| midbrain | UBERON:0001891 | 70.01 | gold quality |
| olfactory bulb | UBERON:0002264 | 69.59 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 69.38 | gold quality |
| hypothalamus | UBERON:0001898 | 68.83 | gold quality |
| pons | UBERON:0000988 | 68.78 | gold quality |
| dorsal plus ventral thalamus | UBERON:0001897 | 68.66 | gold quality |
| ventral tegmental area | UBERON:0002691 | 68.62 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-131882 | yes | 978.32 |
| E-CURD-119 | yes | 69.20 |
| E-CURD-135 | no | 1003.19 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): BCL6, FOXC1, HNF4A, IRF1
miRNA regulators (miRDB)
10 targeting SLC22A6, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5193 | 100.00 | 67.26 | 1744 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-92A-2-5P | 99.75 | 67.01 | 2164 |
| HSA-MIR-6715B-3P | 98.80 | 68.07 | 1204 |
| HSA-MIR-629-5P | 98.78 | 68.72 | 1032 |
| HSA-MIR-193B-5P | 97.91 | 65.88 | 837 |
| HSA-MIR-4456 | 97.50 | 64.88 | 1678 |
| HSA-MIR-152-5P | 96.42 | 66.59 | 960 |
| HSA-MIR-203A-5P | 96.33 | 65.03 | 714 |
| HSA-MIR-6742-5P | 96.32 | 64.01 | 869 |
Literature-anchored findings (GeneRIF, showing 40)
- elucidation of the molecular mechanism for renal tetracycline transport by human organic anion transporters (hOATs) using proximal tubular cells stably expressing hOATs (PMID:11855680)
- cimetidine was found to be substrate for fROAT/hOAT1; organic anion transporters likely contribute to cimetidine excretion in proximal tubules (PMID:12429554)
- hOAT1 transports urate,and is not responsible for familial juvenile gouty nephropathy in the two sisters examined in this study. (PMID:12472777)
- PKC-induced hOAT1 downregulation is achieved through carrier retrieval from the cell membrane and does not involve phosphorylation of the predicted classic hOAT1 PKC consensus sites (PMID:12874449)
- stimulation of basolateral organic anion uptake by EGF or PGE2 is a widespread (if not general) regulatory mechanism, and the signal transduction pathway involved seems to be general (PMID:14644751)
- glycosylation has a role in the targeting of OAT1 onto the plasma membrane (PMID:14749323)
- The level of human OAT1 mRNA is significantly lower in the kidney of patients with renal diseases than in the normal controls. (PMID:14984259)
- “…provide evidence for a general expression of the recently identified splice-variants of hOTA1…Their expression is restricted to the kidney cortex.” p. 430 (PMID:15039295)
- Leu-30 and Thr-36 in transmembrane domain 1 are critical determinants of hOAT1 function (PMID:15145940)
- Organic anion transporter(s) likely play prominent role in basolateral transport of mercuric ions by proximal tubular cells and in nephropathy induced by Hg(2+). (PMID:15200431)
- mercuric conjugates of Hcy are potential transportable substrates of OAT1. (PMID:15284288)
- the coding region of OAT1 has low genetic and functional diversity and its variants may not contribute substantially to interindividual differences in renal elimination of xenobiotics (PMID:15864112)
- hOAT1 has been suggested as the basis of nephrotoxicity induced by nucleoside phosphonate analogs (PMID:15914676)
- hOAT1 exists in the plasma membrane as a homooligomer, possibly trimer, and higher order of oligomer (PMID:16046403)
- CH(3)Hg-Cys is transported by hOAT1 (PMID:16164645)
- The clustering of OAT genes in the genome raises the possibility that nucleotide polymorphisms in SLC22A6 could also effect SLC22A8 expression, and vice versa. (PMID:16648942)
- the C terminus of hOAT1 has a central role in its function (PMID:16920720)
- identified two new residues, Tyr(230) and Phe(438), which are important for substrate/protein interactions (PMID:17038320)
- this paper reports the first characterization of the human OAT1 promoter and the first gene in the kidney whose promoter activity is regulated by HNF-4alpha (PMID:17344191)
- it is concluded that Arg(466) influences the binding of glutarate, but not interaction with p-aminohippurate, and interacts with chloride, which is a major determinant in substrate translocation (PMID:17353191)
- Both hOAT1 and hOAT3 are responsible for the basolateral uptake of edaravone sulfate in the kidney. (PMID:17502342)
- hOAT1 did not mediate rosuvastatin uptake (PMID:17585018)
- The data provide a model for the concerted action of OAT1 mediating basolateral secretion of glutarate derivatives from proximal tubule cells (PMID:18365245)
- OAT1 undergoes constitutive and protein kinase C-regulated trafficking through a dynamin- and clathrin-dependent pathway (PMID:18818201)
- The renal expression of OAT1 and OAT3 should be taken into account in order to improve pharmacotherapeutic efficacy and to prevent drug toxicity during the onset of this hepatic disease. (PMID:19034961)
- Gaboxadol could be taken up into the kidney by hOAT1 followed by glucuronidation and efflux of the conjugate into urine via MRP4. (PMID:19082692)
- ANG II inhibited hOAT1 activity through activation of PKCalpha, which led to the redistribution of the transporter from the cell surface to the intracellular compartments. (PMID:19088254)
- OAT1 appears to be one of the major contributors to renal basolateral uptake of citrulline, and impaired activities of these transporters may contribute substantially to the increase in plasma citrulline in renal failure. (PMID:19403644)
- results suggest that genetic polymorphisms may not be a significant contributing factor to variations in the hOAT2 expression or hOAT2 transport activity (PMID:19854166)
- Our results are the first to highlight the central role of TM 12 in maintaining the stability and in promoting the maturation efficiency of hOAT1. (PMID:19892921)
- Intergenic polymorphism rs10792367 between OAT1 and OAT3 is not associated with hypertension, but appears to be involved in between-individual variations in antihypertensive responses to hydrochlorothiazide. (PMID:21164499)
- The data reveal alpha-ketoglutarate as a common high-affinity substrate of NaDC3, OAT1, and OAT3 (PMID:21865262)
- High urine OAT1 and OAT3 and low OAT4 is associated with early reversible proximal tubular damage. (PMID:21945944)
- Both hOAT1 and hOAT3 markedly stimulated the uptake of kynurenic acid into oocytes. (PMID:22108572)
- It was shown that human OAT3 and OAT1 cannot be involved in the renal extraction of glutathione from blood, but OAT1 could support intracellular glutathione synthesis by taking up cysteinyl glycine. (PMID:23255614)
- The results confirmed that OAT1, OAT3, OCT2, MATE1, and MATE2-K were coexpressed in tubular epithelial cells. (PMID:23630107)
- PKC isoform PKCalpha was responsible for OAT1 ubiquitination. (PMID:23640180)
- transport of xanthurenic acid by OAT1 and OAT3 (PMID:23832370)
- high capacity p-cresyl sulfate trasnporter (PMID:24185403)
- Clopidogrel/clopidogrel carboxylate are weak inhibitors of OAT1. (PMID:24530383)
Cross-species orthologs
51 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | slc22a4 | ENSDARG00000005335 |
| danio_rerio | oatx | ENSDARG00000019713 |
| danio_rerio | si:dkey-166k12.1 | ENSDARG00000054690 |
| danio_rerio | si:dkey-119m7.4 | ENSDARG00000071049 |
| danio_rerio | si:dkey-119m7.8 | ENSDARG00000096654 |
| mus_musculus | Slc22a6 | ENSMUSG00000024650 |
| rattus_norvegicus | Slc22a6 | ENSRNOG00000018215 |
| drosophila_melanogaster | Orct | FBGN0019952 |
| drosophila_melanogaster | CG15221 | FBGN0030331 |
| drosophila_melanogaster | Balat | FBGN0033778 |
| drosophila_melanogaster | CG4630 | FBGN0033809 |
| drosophila_melanogaster | CG5592 | FBGN0035645 |
| drosophila_melanogaster | CG10486 | FBGN0035647 |
| drosophila_melanogaster | SLC22A | FBGN0037140 |
| drosophila_melanogaster | CG7458 | FBGN0037144 |
| drosophila_melanogaster | CG14691 | FBGN0037829 |
| drosophila_melanogaster | CG14855 | FBGN0038260 |
| drosophila_melanogaster | CG14856 | FBGN0038261 |
| drosophila_melanogaster | CG14857 | FBGN0038262 |
| drosophila_melanogaster | CG12783 | FBGN0038448 |
| drosophila_melanogaster | CG7333 | FBGN0038715 |
| drosophila_melanogaster | CG7342 | FBGN0038716 |
| drosophila_melanogaster | CG17751 | FBGN0038717 |
| drosophila_melanogaster | CG17752 | FBGN0038718 |
| drosophila_melanogaster | CG16727 | FBGN0038719 |
| drosophila_melanogaster | CG6231 | FBGN0038720 |
| drosophila_melanogaster | CG4465 | FBGN0038750 |
| drosophila_melanogaster | CG4462 | FBGN0038752 |
| drosophila_melanogaster | CG4459 | FBGN0038753 |
| drosophila_melanogaster | CG6356 | FBGN0039178 |
| drosophila_melanogaster | CG3690 | FBGN0040350 |
| drosophila_melanogaster | CG31103 | FBGN0051103 |
| drosophila_melanogaster | CG31106 | FBGN0051106 |
| drosophila_melanogaster | CG31272 | FBGN0051272 |
| drosophila_melanogaster | CG33233 | FBGN0053233 |
| drosophila_melanogaster | CG33234 | FBGN0053234 |
| drosophila_melanogaster | Orct2 | FBGN0086365 |
| drosophila_melanogaster | CG42269 | FBGN0259164 |
| drosophila_melanogaster | CG44098 | FBGN0264907 |
| caenorhabditis_elegans | WBGENE00003837 | |
| caenorhabditis_elegans | oct-1 | WBGENE00003842 |
| caenorhabditis_elegans | WBGENE00003843 | |
| caenorhabditis_elegans | WBGENE00006220 | |
| caenorhabditis_elegans | WBGENE00008110 | |
| caenorhabditis_elegans | WBGENE00011456 | |
| caenorhabditis_elegans | WBGENE00014127 | |
| caenorhabditis_elegans | WBGENE00015088 | |
| caenorhabditis_elegans | WBGENE00017751 | |
| caenorhabditis_elegans | WBGENE00019408 | |
| caenorhabditis_elegans | WBGENE00020701 | |
| caenorhabditis_elegans | WBGENE00044455 |
Paralogs (22): SLC22A16 (ENSG00000004809), SLC22A17 (ENSG00000092096), SLC22A2 (ENSG00000112499), SLC22A7 (ENSG00000137204), SLC22A23 (ENSG00000137266), SLC22A14 (ENSG00000144671), SLC22A3 (ENSG00000146477), SLC22A8 (ENSG00000149452), SLC22A9 (ENSG00000149742), SVOPL (ENSG00000157703), SLC22A15 (ENSG00000163393), SVOP (ENSG00000166111), SLC22A11 (ENSG00000168065), SLC22A13 (ENSG00000172940), SLC22A1 (ENSG00000175003), SLC22A10 (ENSG00000184999), SLC22A25 (ENSG00000196600), SLC22A4 (ENSG00000197208), SLC22A5 (ENSG00000197375), SLC22A24 (ENSG00000197658), SLC22A12 (ENSG00000197891), SLC22A31 (ENSG00000259803)
Protein
Protein identifiers
Solute carrier family 22 member 6 — Q4U2R8 (reviewed: Q4U2R8)
Alternative names: Organic anion transporter 1, PAH transporter, Renal organic anion transporter 1
All UniProt accessions (2): F5H0T7, Q4U2R8
UniProt curated annotations — full annotation on UniProt →
Function. Secondary active transporter that functions as a Na(+)-independent organic anion (OA)/dicarboxylate antiporter where the uptake of one molecule of OA into the cell is coupled with an efflux of one molecule of intracellular dicarboxylate such as 2-oxoglutarate or glutarate. Mediates the uptake of OA across the basolateral side of proximal tubule epithelial cells, thereby contributing to the renal elimination of endogenous OA from the systemic circulation into the urine. Functions as a biopterin transporters involved in the uptake and the secretion of coenzymes tetrahydrobiopterin (BH4), dihydrobiopterin (BH2) and sepiapterin to urine, thereby determining baseline levels of blood biopterins. Transports prostaglandin E2 (PGE2) and prostaglandin F2-alpha (PGF2-alpha) and may contribute to their renal excretion. Also mediates the uptake of cyclic nucleotides such as cAMP and cGMP. Involved in the transport of neuroactive tryptophan metabolites kynurenate (KYNA) and xanthurenate (XA) and may contribute to their secretion from the brain. May transport glutamate. Also involved in the disposition of uremic toxins and potentially toxic xenobiotics by the renal organic anion secretory pathway, helping reduce their undesired toxicological effects on the body. Uremic toxins include the indoxyl sulfate (IS), hippurate/N-benzoylglycine (HA), indole acetate (IA), 3-carboxy-4- methyl-5-propyl-2-furanpropionate (CMPF) and urate. Xenobiotics include the mycotoxin ochratoxin (OTA). May also contribute to the transport of organic compounds in testes across the blood-testis-barrier.
Subcellular location. Basolateral cell membrane. Basal cell membrane.
Tissue specificity. Strongly expressed in kidney. Expressed at lower level in liver, skeletal muscle, brain and placenta. In kidney, found at the basolateral membrane of the proximal tubule. In testis, primarily localized to the basal membrane of Sertoli cells and weakly expressed in Leydig cells and vascular endothelial cells.
Post-translational modifications. Glycosylated. Glycosylation at Asn-113 may occur at a secondary level. Glycosylation is necessary for proper targeting of the transporter to the plasma membrane.
Domain organisation. Multiple cysteine residues are necessary for proper targeting to the plasma membrane.
Miscellaneous. Involved in the renal transport of a variety of drugs with well-known nephrotoxic potential, therefore may play a role in the etiology of the drug-associated nephrotoxicity. Uptakes the diagnostic agent PAH/para-aminohippurate and clinically used drugs. Mediates the pH- and chloride-dependent bidirectional transport of PAH/para-aminohippurate in exchange for 2-oxoglutarate or glutarate as counteranions. Can also mediate PAH/cGMP exchange.
Similarity. Belongs to the major facilitator (TC 2.A.1) superfamily. Organic cation transporter (TC 2.A.1.19) family.
Isoforms (4)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q4U2R8-1 | 1, OAT1-1 | yes |
| Q4U2R8-2 | 2, OAT1-2 | |
| Q4U2R8-3 | 3, OAT1-3 | |
| Q4U2R8-4 | 4, OAT1-4 |
RefSeq proteins (4): NP_004781, NP_695008, NP_695009, NP_695010 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR004749 | Orgcat_transp/SVOP | Family |
| IPR005828 | MFS_sugar_transport-like | Family |
| IPR020846 | MFS_dom | Domain |
| IPR036259 | MFS_trans_sf | Homologous_superfamily |
Pfam: PF00083
Catalyzed reactions (Rhea), 12 shown:
- (indol-3-yl)acetate(out) + a dicarboxylate(in) = (indol-3-yl)acetate(in) + a dicarboxylate(out) (RHEA:75983)
- indoxyl sulfate(out) + a dicarboxylate(in) = indoxyl sulfate(in) + a dicarboxylate(out) (RHEA:75987)
- N-benzoylglycine(out) + a dicarboxylate(in) = N-benzoylglycine(in) + a dicarboxylate(out) (RHEA:75991)
- 3-carboxy-4-methyl-5-propyl-2-furanpropanoate(out) + a dicarboxylate(in) = 3-carboxy-4-methyl-5-propyl-2-furanpropanoate(in) + a dicarboxylate(out) (RHEA:75995)
- kynurenate(out) + glutarate(in) = kynurenate(in) + glutarate(out) (RHEA:75999)
- (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin(out) + a dicarboxylate(in) = (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin(in) + a dicarboxylate(out) (RHEA:76071)
- L-erythro-7,8-dihydrobiopterin(out) + a dicarboxylate(in) = L-erythro-7,8-dihydrobiopterin(in) + a dicarboxylate(out) (RHEA:76075)
- L-sepiapterin(out) + a dicarboxylate(in) = L-sepiapterin(in) + a dicarboxylate(out) (RHEA:76079)
- prostaglandin F2alpha(out) + a dicarboxylate(in) = prostaglandin F2alpha(in) + a dicarboxylate(out) (RHEA:76119)
- prostaglandin E2(out) + a dicarboxylate(in) = prostaglandin E2(in) + a dicarboxylate(out) (RHEA:76123)
- 3’,5’-cyclic AMP(out) + a dicarboxylate(in) = 3’,5’-cyclic AMP(in) + a dicarboxylate(out) (RHEA:76127)
- 3’,5’-cyclic GMP(out) + a dicarboxylate(in) = 3’,5’-cyclic GMP(in) + a dicarboxylate(out) (RHEA:76131)
UniProt features (48 total): topological domain 13, transmembrane region 12, mutagenesis site 6, glycosylation site 5, sequence variant 4, site 2, splice variant 2, sequence conflict 2, chain 1, region of interest 1
Structure
Experimental structures (PDB)
12 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 9MAU | ELECTRON MICROSCOPY | 2.87 |
| 9J04 | ELECTRON MICROSCOPY | 3.15 |
| 9U55 | ELECTRON MICROSCOPY | 3.17 |
| 9M8Y | ELECTRON MICROSCOPY | 3.27 |
| 9M9V | ELECTRON MICROSCOPY | 3.31 |
| 9MC8 | ELECTRON MICROSCOPY | 3.31 |
| 9KL5 | ELECTRON MICROSCOPY | 3.33 |
| 9J02 | ELECTRON MICROSCOPY | 3.36 |
| 9UNX | ELECTRON MICROSCOPY | 3.45 |
| 9J06 | ELECTRON MICROSCOPY | 3.68 |
| 9KKK | ELECTRON MICROSCOPY | 3.85 |
| 9KLZ | ELECTRON MICROSCOPY | 3.88 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q4U2R8-F1 | 83.07 | 0.40 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 230 (important for interaction with cidofovir); 438 (important for interaction with cidofovir and pah)
Glycosylation sites (5): 39, 56, 92, 97, 113
Mutagenesis-validated functional residues (6):
| Position | Phenotype |
|---|---|
| 30 | complete loss of pah transport activity. |
| 36 | complete loss of pah transport activity. |
| 39 | complete loss of pah transport activity. |
| 230 | loss of membrane protein expression and little uptake of cidofovir. |
| 431 | decrease in the level of membrane protein expression and 70 % loss of pah uptake. |
| 438 | decrease in the level of membrane protein expression, 70 % loss of pah uptake, increased affinity for cidofovir, lower v |
Function
Pathways and Gene Ontology
Reactome pathways
5 pathways
| ID | Pathway |
|---|---|
| R-HSA-561048 | Organic anion transport by SLC22 transporters |
| R-HSA-382551 | Transport of small molecules |
| R-HSA-425366 | |
| R-HSA-425407 | SLC-mediated transmembrane transport |
| R-HSA-549132 |
MSigDB gene sets: 144 (showing top):
GOBP_EXCRETION, GOBP_SODIUM_INDEPENDENT_ORGANIC_ANION_TRANSPORT, GOBP_EPITHELIUM_DEVELOPMENT, MORF_FLT1, GOBP_METANEPHROS_DEVELOPMENT, MORF_MSH3, RORA1_01, GOBP_METANEPHRIC_EPITHELIUM_DEVELOPMENT, MODULE_64, MORF_BRCA1, MORF_ESR1, GOBP_KIDNEY_EPITHELIUM_DEVELOPMENT, MORF_RAD51L3, GOBP_ORGANIC_ACID_TRANSPORT, MODULE_379
GO Biological Process (10): monoatomic anion transport (GO:0006820), obsolete organic anion transport (GO:0015711), prostaglandin transport (GO:0015732), alpha-ketoglutarate transport (GO:0015742), sodium-independent organic anion transport (GO:0043252), metanephric proximal tubule development (GO:0072237), renal tubular secretion (GO:0097254), inorganic anion transport (GO:0015698), xenobiotic transport (GO:0042908), transmembrane transport (GO:0055085)
GO Molecular Function (11): solute:inorganic anion antiporter activity (GO:0005452), obsolete organic anion transmembrane transporter activity (GO:0008514), prostaglandin transmembrane transporter activity (GO:0015132), alpha-ketoglutarate transmembrane transporter activity (GO:0015139), antiporter activity (GO:0015297), obsolete sodium-independent organic anion transmembrane transporter activity (GO:0015347), transmembrane transporter activity (GO:0022857), chloride ion binding (GO:0031404), identical protein binding (GO:0042802), xenobiotic transmembrane transporter activity (GO:0042910), protein binding (GO:0005515)
GO Cellular Component (7): plasma membrane (GO:0005886), caveola (GO:0005901), basal plasma membrane (GO:0009925), basolateral plasma membrane (GO:0016323), protein-containing complex (GO:0032991), extracellular exosome (GO:0070062), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| SLC-mediated transport of organic anions | 1 |
| Transport of small molecules | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| transport | 3 |
| transmembrane transport | 2 |
| plasma membrane region | 2 |
| monoatomic ion transport | 1 |
| fatty acid transport | 1 |
| icosanoid transport | 1 |
| dicarboxylic acid transport | 1 |
| proximal tubule development | 1 |
| metanephric nephron tubule development | 1 |
| renal system process | 1 |
| excretion | 1 |
| cellular process | 1 |
| antiporter activity | 1 |
| prostaglandin transport | 1 |
| icosanoid transmembrane transporter activity | 1 |
| dicarboxylic acid transmembrane transporter activity | 1 |
| alpha-ketoglutarate transport | 1 |
| secondary active transmembrane transporter activity | 1 |
| transporter activity | 1 |
| anion binding | 1 |
| protein binding | 1 |
| transmembrane transporter activity | 1 |
| xenobiotic transport | 1 |
| binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
| plasma membrane raft | 1 |
| basal part of cell | 1 |
| basal plasma membrane | 1 |
| cellular_component | 1 |
| extracellular vesicle | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
1300 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| SLC22A6 | SLC2A9 | Q9NRM0 | 780 |
| SLC22A6 | YRDC | Q86U90 | 771 |
| SLC22A6 | SLC47A1 | Q96FL8 | 733 |
| SLC22A6 | Q92681 | Q92681 | 722 |
| SLC22A6 | ABCC4 | O15439 | 722 |
| SLC22A6 | SLC6A2 | P23975 | 714 |
| SLC22A6 | SLC47A2 | Q86VL8 | 712 |
| SLC22A6 | SLCO1B3 | Q9NPD5 | 706 |
| SLC22A6 | SLC15A1 | P46059 | 704 |
| SLC22A6 | ABCC2 | Q92887 | 704 |
| SLC22A6 | SLCO1B1 | Q9Y6L6 | 685 |
| SLC22A6 | ABCG2 | Q9UNQ0 | 677 |
| SLC22A6 | SLC17A3 | O00476 | 657 |
| SLC22A6 | SLC15A2 | Q16348 | 648 |
| SLC22A6 | SLC17A1 | Q14916 | 647 |
IntAct
7 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| APPBP2 | SLC22A6 | psi-mi:“MI:0915”(physical association) | 0.620 |
| SLC22A6 | APPBP2 | psi-mi:“MI:0915”(physical association) | 0.620 |
| IL3RA | STX7 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC22A6 | YIF1A | psi-mi:“MI:0914”(association) | 0.350 |
| SLC22A6 | CLGN | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (76): APPBP2 (Two-hybrid), SLC25A23 (Affinity Capture-MS), SLC25A46 (Affinity Capture-MS), SLC20A2 (Affinity Capture-MS), SLC25A24 (Affinity Capture-MS), LPCAT3 (Affinity Capture-MS), GK (Affinity Capture-MS), RAB32 (Affinity Capture-MS), SLC38A7 (Affinity Capture-MS), ERGIC3 (Affinity Capture-MS), ERGIC2 (Affinity Capture-MS), MCU (Affinity Capture-MS), PDXDC1 (Affinity Capture-MS), CHPT1 (Affinity Capture-MS), SFXN5 (Affinity Capture-MS)
ESM2 similar proteins: A0A3Q2IDB4, A0A8B7HA97, A4ZYQ5, A6NK97, G1SZD9, O35956, O57379, O88909, P22732, P23945, P43427, Q0IHM1, Q2KIV1, Q3ZAV1, Q4U2R8, Q4W8A2, Q4W8A3, Q5R9C4, Q5RC45, Q5RCH6, Q5RET7, Q63ZE4, Q66J52, Q6DFR1, Q6NUB3, Q6NYN7, Q6PXP3, Q6T423, Q70BM6, Q76M72, Q76M99, Q80UJ1, Q863Y9, Q864Z3, Q8CFZ5, Q8HY24, Q8IVM8, Q8MK48, Q8N4F4, Q8R0S9
Diamond homologs: A0A3Q2IDB4, A0A8B7HA97, A6NK97, A6QLW8, B2GV36, G1SZD9, O34691, O35956, O57379, O75751, O88446, O88909, Q1RPP5, Q28ES4, Q2KIV1, Q3YAW7, Q3ZAV1, Q4U2R8, Q4W8A2, Q4W8A3, Q5R540, Q5R9C4, Q5RC45, Q5RCH6, Q5RLM2, Q63ZE4, Q66J52, Q66J54, Q6A4L0, Q6NYN7, Q6T423, Q70BM6, Q76M72, Q76M99, Q80UJ1, Q864Z3, Q8CFZ5, Q8HY24, Q8IVM8, Q8MK48
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
87 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 78 |
| Likely benign | 7 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1529 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:62979597:C:CC | acceptor_gain | 1.0000 |
| 11:62979728:GCTCA:G | donor_loss | 1.0000 |
| 11:62979730:TCA:T | donor_loss | 1.0000 |
| 11:62979731:CA:C | donor_loss | 1.0000 |
| 11:62979732:A:AC | donor_gain | 1.0000 |
| 11:62979732:AC:A | donor_gain | 1.0000 |
| 11:62979733:C:CC | donor_gain | 1.0000 |
| 11:62979733:C:CT | donor_loss | 1.0000 |
| 11:62979733:CC:C | donor_gain | 1.0000 |
| 11:62979944:CAAAC:C | acceptor_gain | 1.0000 |
| 11:62979946:AAC:A | acceptor_gain | 1.0000 |
| 11:62979946:AACC:A | acceptor_loss | 1.0000 |
| 11:62979947:AC:A | acceptor_gain | 1.0000 |
| 11:62979948:CC:C | acceptor_gain | 1.0000 |
| 11:62979948:CCT:C | acceptor_loss | 1.0000 |
| 11:62979949:C:CC | acceptor_gain | 1.0000 |
| 11:62979949:CTA:C | acceptor_loss | 1.0000 |
| 11:62979950:T:C | acceptor_loss | 1.0000 |
| 11:62979953:C:CT | acceptor_gain | 1.0000 |
| 11:62981256:TCA:T | donor_loss | 1.0000 |
| 11:62981257:CACCT:C | donor_loss | 1.0000 |
| 11:62981258:A:AG | donor_loss | 1.0000 |
| 11:62981259:C:A | donor_loss | 1.0000 |
| 11:62981261:T:TA | donor_gain | 1.0000 |
| 11:62981270:A:AC | donor_gain | 1.0000 |
| 11:62981271:A:C | donor_gain | 1.0000 |
| 11:62981379:AGAAC:A | acceptor_gain | 1.0000 |
| 11:62981380:GAAC:G | acceptor_gain | 1.0000 |
| 11:62981381:AAC:A | acceptor_gain | 1.0000 |
| 11:62981381:AACC:A | acceptor_loss | 1.0000 |
AlphaMissense
3548 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:62979936:G:C | S350R | 0.997 |
| 11:62979936:G:T | S350R | 0.997 |
| 11:62979938:T:G | S350R | 0.997 |
| 11:62977277:C:T | G491D | 0.996 |
| 11:62977342:G:C | S469R | 0.996 |
| 11:62977342:G:T | S469R | 0.996 |
| 11:62977344:T:G | S469R | 0.996 |
| 11:62977333:G:C | S472R | 0.995 |
| 11:62977333:G:T | S472R | 0.995 |
| 11:62977335:T:G | S472R | 0.995 |
| 11:62977346:C:T | G468D | 0.995 |
| 11:62981946:G:C | S231R | 0.995 |
| 11:62981946:G:T | S231R | 0.995 |
| 11:62981948:T:G | S231R | 0.995 |
| 11:62977347:C:G | G468R | 0.994 |
| 11:62979555:C:G | G432R | 0.994 |
| 11:62979556:C:A | K431N | 0.994 |
| 11:62979556:C:G | K431N | 0.994 |
| 11:62979769:C:T | G406D | 0.994 |
| 11:62979770:C:G | G406R | 0.994 |
| 11:62977255:G:C | S498R | 0.993 |
| 11:62977255:G:T | S498R | 0.993 |
| 11:62977257:T:G | S498R | 0.993 |
| 11:62979506:A:G | L448P | 0.993 |
| 11:62979561:C:G | G430R | 0.993 |
| 11:62979561:C:T | G430R | 0.993 |
| 11:62979806:G:T | R394S | 0.993 |
| 11:62979864:A:C | F374L | 0.993 |
| 11:62979864:A:T | F374L | 0.993 |
| 11:62979866:A:G | F374L | 0.993 |
dbSNP variants (sampled 300 via entrez): RS1000108104 (11:62984914 T>C), RS1000387451 (11:62978773 G>A,C), RS1000989446 (11:62976974 G>A), RS1000998373 (11:62983798 T>C), RS1001114593 (11:62983421 C>G), RS1001289761 (11:62986487 C>A), RS1001306753 (11:62984585 T>C,G), RS1001771656 (11:62977928 A>G), RS1002316364 (11:62982872 G>A), RS1002952689 (11:62983246 A>G), RS1003012861 (11:62976368 A>G), RS1003538281 (11:62976738 G>A), RS1004597530 (11:62980866 T>C), RS1005168971 (11:62977438 C>T), RS1005196698 (11:62982308 G>A,T)
Disease associations
OMIM: gene MIM:607582 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST008963_3 | Glucose homeostasis traits | 4.000000e-07 |
| GCST008972_29 | Urate levels | 2.000000e-16 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004468 | glucose measurement |
| EFO:0004531 | urate measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1641347 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
32 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,334,765 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1146 | CEFAMANDOLE | 4 | 21,886 |
| CHEMBL139 | DICLOFENAC | 4 | 125,009 |
| CHEMBL1435 | CEFAZOLIN | 4 | 37,670 |
| CHEMBL154 | NAPROXEN | 4 | 136,434 |
| CHEMBL161 | CEFTRIAXONE | 4 | 71,135 |
| CHEMBL1644 | CEFADROXIL | 4 | 6,102 |
| CHEMBL1730 | CEFOTAXIME | 4 | 480 |
| CHEMBL316157 | CEPHALORIDINE | 4 | 45,474 |
| CHEMBL388590 | BENZBROMARONE | 4 | 8,245 |
| CHEMBL463 | AMINOHIPPURIC ACID | 4 | 2,260 |
| CHEMBL507674 | CEFOPERAZONE | 4 | 23,712 |
| CHEMBL521 | IBUPROFEN | 4 | 228,490 |
| CHEMBL527 | PIROXICAM | 4 | 107,554 |
| CHEMBL5314375 | CIDOFOVIR | 4 | 120 |
| CHEMBL563 | FLURBIPROFEN | 4 | 71,809 |
| CHEMBL571 | KETOPROFEN | 4 | 103,580 |
| CHEMBL6 | INDOMETHACIN | 4 | 156,366 |
| CHEMBL617 | CEPHALOTHIN | 4 | 24,927 |
| CHEMBL622 | ETODOLAC | 4 | 57,872 |
| CHEMBL897 | PROBENECID | 4 | 105,640 |
| CHEMBL898 | DIFLUNISAL | 4 | |
| CHEMBL922 | ADEFOVIR DIPIVOXIL | 4 | |
| CHEMBL4112930 | PAMIPARIB | 3 | |
| CHEMBL484 | ADEFOVIR | 3 | |
| CHEMBL52333 | ROLOFYLLINE | 3 | |
| CHEMBL119625 | ZONAMPANEL | 2 | |
| CHEMBL1231530 | BETAMIPRON | 2 | |
| CHEMBL324846 | OCTANOIC ACID | 2 | |
| CHEMBL3707347 | VERINURAD | 2 | |
| CHEMBL6246 | ELLAGIC ACID | 2 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
2 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs11568626 | Other | 4 | adefovir dipivoxil;cidofovir;tenofovir | |
| rs11568634 | Other | 4 | adefovir dipivoxil |
PharmGKB variants
4 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs4149170 | SLC22A6 | 0.00 | 0 | ||
| rs11568626 | SLC22A6 | 4 | -1.75 | 1 | adefovir dipivoxil;cidofovir;tenofovir |
| rs11568634 | SLC22A6 | 4 | -1.25 | 1 | adefovir dipivoxil |
| rs4149171 | SLC22A6 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: transporter — Organic anion transporters (OATs)
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| probenecid | Inhibition | 4.9 | pIC50 |
ChEMBL bioactivities
42 potent at pChembl≥5 of 81 total, top 41 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.52 | Ki | 30 | nM | CEFAMANDOLE |
| 6.75 | Ki | 180 | nM | CEFAZOLIN |
| 6.68 | Ki | 210 | nM | CEFOPERAZONE |
| 6.66 | Ki | 220 | nM | CEPHALOTHIN |
| 6.64 | Ki | 230 | nM | CEFTRIAXONE |
| 6.57 | IC50 | 270 | nM | ELLAGIC ACID |
| 6.13 | Ki | 740 | nM | CEPHALORIDINE |
| 6.07 | IC50 | 850 | nM | DIFLUNISAL |
| 5.89 | IC50 | 1300 | nM | KETOPROFEN |
| 5.85 | IC50 | 1400 | nM | KETOPROFEN |
| 5.82 | IC50 | 1500 | nM | FLURBIPROFEN |
| 5.67 | IC50 | 2120 | nM | BENZBROMARONE |
| 5.52 | IC50 | 3000 | nM | INDOMETHACIN |
| 5.52 | IC50 | 3000 | nM | ZONAMPANEL |
| 5.50 | Ki | 3130 | nM | CEFOTAXIME |
| 5.48 | IC50 | 3300 | nM | CHEMBL6143249 |
| 5.46 | IC50 | 3500 | nM | CHEMBL4527448 |
| 5.40 | IC50 | 4000 | nM | DICLOFENAC |
| 5.37 | Ki | 4300 | nM | PROBENECID |
| 5.36 | Ki | 4410 | nM | PROBENECID |
| 5.36 | IC50 | 4400 | nM | CHEMBL4562825 |
| 5.34 | IC50 | 4600 | nM | BENZBROMARONE |
| 5.34 | IC50 | 4600 | nM | VERINURAD |
| 5.31 | IC50 | 4900 | nM | GLUTARATE |
| 5.27 | Ki | 5410 | nM | OCTANOIC ACID |
| 5.24 | IC50 | 5800 | nM | NAPROXEN |
| 5.22 | IC50 | 6000 | nM | BETAMIPRON |
| 5.22 | Ki | 6020 | nM | AMINOHIPPURIC ACID |
| 5.21 | Ki | 6140 | nM | CEFADROXIL |
| 5.21 | IC50 | 6190 | nM | CHEMBL5542977 |
| 5.20 | IC50 | 6300 | nM | PROBENECID |
| 5.14 | Ki | 7200 | nM | EPAMINURAD |
| 5.13 | IC50 | 7400 | nM | PROBENECID |
| 5.11 | Ki | 7820 | nM | ROLOFYLLINE |
| 5.10 | IC50 | 8000 | nM | IBUPROFEN |
| 5.08 | IC50 | 8400 | nM | CHEMBL4584575 |
| 5.06 | IC50 | 8800 | nM | AMINOHIPPURIC ACID |
| 5.04 | IC50 | 9170 | nM | CHEMBL5568246 |
| 5.03 | IC50 | 9300 | nM | CHEMBL3929544 |
| 5.00 | IC50 | 9900 | nM | CHEMBL2074983 |
| 5.00 | IC50 | 9900 | nM | BENZOTHIAZOLYLCYSTEINE |
PubChem BioAssay actives
39 with measured affinity, of 270 total; 32 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (6R,7R)-7-[[(2R)-2-hydroxy-2-phenylacetyl]amino]-3-[(1-methyltetrazol-5-yl)sulfanylmethyl]-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid | 681377: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing S2 cells | ki | 0.0300 | uM |
| Cefazolin | 681377: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing S2 cells | ki | 0.1800 | uM |
| (6R,7R)-7-[[(2R)-2-[(4-ethyl-2,3-dioxopiperazine-1-carbonyl)amino]-2-(4-hydroxyphenyl)acetyl]amino]-3-[(1-methyltetrazol-5-yl)sulfanylmethyl]-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid | 681377: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing S2 cells | ki | 0.2100 | uM |
| (6R,7R)-3-(acetyloxymethyl)-8-oxo-7-[(2-thiophen-2-ylacetyl)amino]-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid | 681377: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing S2 cells | ki | 0.2200 | uM |
| Ceftriaxone | 681377: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing S2 cells | ki | 0.2300 | uM |
| 6,7,13,14-tetrahydroxy-2,9-dioxatetracyclo[6.6.2.04,16.011,15]hexadeca-1(15),4,6,8(16),11,13-hexaene-3,10-dione | 679387: TP_TRANSPORTER: inhibition of ochratoxin A uptake (ochratoxin A / 1uM) in Xenopus laevis oocytes | ic50 | 0.2700 | uM |
| (6R,7R)-8-oxo-3-(pyridin-1-ium-1-ylmethyl)-7-[(2-thiophen-2-ylacetyl)amino]-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylate | 681377: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing S2 cells | ki | 0.7400 | uM |
| Diflunisal | 681160: TP_TRANSPORTER: inhibition of Adefovir uptake in OAT1-expressing CHO cells | ic50 | 0.8500 | uM |
| Ketoprofen | 681160: TP_TRANSPORTER: inhibition of Adefovir uptake in OAT1-expressing CHO cells | ic50 | 1.3000 | uM |
| Flurbiprofen | 681160: TP_TRANSPORTER: inhibition of Adefovir uptake in OAT1-expressing CHO cells | ic50 | 1.5000 | uM |
| (3,5-dibromo-4-hydroxyphenyl)-(2-ethyl-1-benzofuran-3-yl)methanone | 1999811: Inhibition of OAT1 (unknown origin) transfected in HEK293 cells assessed as inhibition of 6-CFL uptake preincubated for 30 mins followed by 6-CFL addition and measured for 15 mins by fluorescence based microplate reader analysis | ic50 | 2.1200 | uM |
| 2-(7-imidazol-1-yl-6-nitro-2,3-dioxo-4H-quinoxalin-1-yl)acetic acid | 496844: Inhibition of human OAT1 | ic50 | 3.0000 | uM |
| Indomethacin | 681160: TP_TRANSPORTER: inhibition of Adefovir uptake in OAT1-expressing CHO cells | ic50 | 3.0000 | uM |
| Cefotaxime | 681377: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing S2 cells | ki | 3.1300 | uM |
| bis(4-hydroxy-3-methoxyphenyl)methanone | 1639437: Inhibition of OAT1 (unknown origin) expressed in HEK293 cells assessed as reduction in 6-CF uptake measured after 5 mins by fluorescence assay | ic50 | 3.5000 | uM |
| Diclofenac | 681160: TP_TRANSPORTER: inhibition of Adefovir uptake in OAT1-expressing CHO cells | ic50 | 4.0000 | uM |
| Probenecid | 679393: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing CHO cells | ki | 4.3000 | uM |
| 4-ethenyl-7-hydroxy-8-methyl-9,10-dihydrophenanthrene-2-carboxylic acid | 1639437: Inhibition of OAT1 (unknown origin) expressed in HEK293 cells assessed as reduction in 6-CF uptake measured after 5 mins by fluorescence assay | ic50 | 4.4000 | uM |
| pentanedioic acid | 681331: TP_TRANSPORTER: inhibition of 6-Carboxyfluorescein uptake in OAT1-expressing CHO cells | ic50 | 4.9000 | uM |
| caprylic acid | 678821: TP_TRANSPORTER: inhibition of Ochratoxin A uptake in OAT1-expressing S2 cells | ki | 5.4100 | uM |
| Naproxen | 681160: TP_TRANSPORTER: inhibition of Adefovir uptake in OAT1-expressing CHO cells | ic50 | 5.8000 | uM |
| 3-benzamidopropanoic acid | 681160: TP_TRANSPORTER: inhibition of Adefovir uptake in OAT1-expressing CHO cells | ic50 | 6.0000 | uM |
| aminohippuric acid | 598877: Inhibition of human Oat1 expressed in Drosophila S2 cells | ki | 6.0200 | uM |
| Cefadroxil | 681377: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing S2 cells | ki | 6.1400 | uM |
| N-[[(2S)-1-(6-bromoquinoline-4-carbonyl)pyrrolidin-2-yl]methyl]-1,1,1-trifluoromethanesulfonamide | 2075651: Inhibition of human OAT1 expressed in MDCK-II cells using 6-carboxyfluorescein as substrate | ic50 | 6.1900 | uM |
| (3,5-dibromo-4-hydroxyphenyl)-(2,3-dihydropyrido[4,3-b][1,4]oxazin-4-yl)methanone | 1649929: Inhibition of human OAT1 | ki | 7.2000 | uM |
| 1,3-dipropyl-8-(3-tricyclo[3.3.1.03,7]nonanyl)-7H-purine-2,6-dione | 678999: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing S2 cells | ki | 7.8200 | uM |
| 2-[4-(2-methylpropyl)phenyl]propanoic acid | 681160: TP_TRANSPORTER: inhibition of Adefovir uptake in OAT1-expressing CHO cells | ic50 | 8.0000 | uM |
| 3-ethenyl-7-hydroxy-8-methyl-9,10-dihydrophenanthrene-2-carboxylic acid | 1639437: Inhibition of OAT1 (unknown origin) expressed in HEK293 cells assessed as reduction in 6-CF uptake measured after 5 mins by fluorescence assay | ic50 | 8.4000 | uM |
| N-[[(2S)-1-(6-cyclopropylquinoline-4-carbonyl)pyrrolidin-2-yl]methyl]-1,1,1-trifluoromethanesulfonamide | 2075651: Inhibition of human OAT1 expressed in MDCK-II cells using 6-carboxyfluorescein as substrate | ic50 | 9.1700 | uM |
| (2R)-2-amino-3-(1,3-benzothiazol-2-ylsulfanyl)propanoic acid | 679392: TP_TRANSPORTER: inhibition of PAH uptake in OAT1-expressing CHO cells | ic50 | 9.9000 | uM |
| (2S)-2-amino-3-(1,3-benzothiazol-2-ylsulfanyl)propanoic acid | 679384: TP_TRANSPORTER: trans-stimulation in OAT1-COS7 cells | ic50 | 9.9000 | uM |
CTD chemical–gene interactions
116 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| p-Aminohippuric Acid | increases import, increases uptake, increases reaction, affects transport, increases transport (+6 more) | 22 |
| Probenecid | increases import, increases response to substance, affects cotreatment, increases uptake, increases chemical synthesis (+3 more) | 16 |
| adefovir | decreases reaction, increases uptake, increases response to substance, affects response to substance | 5 |
| Glutarates | increases uptake, affects activity, affects binding, decreases reaction, increases transport (+2 more) | 4 |
| 6-carboxyfluorescein | increases uptake, increases reaction, decreases reaction, increases import | 3 |
| glutaric acid | increases reaction, increases export, increases activity, decreases reaction, increases transport (+1 more) | 3 |
| Tenofovir | increases import, increases uptake, decreases reaction, increases response to substance | 3 |
| Cidofovir | increases import, increases response to substance, increases uptake | 3 |
| Cimetidine | decreases reaction, increases uptake, affects transport | 3 |
| Mercury | affects abundance, affects response to substance, affects cotreatment, increases transport | 3 |
| Methotrexate | decreases reaction, increases uptake, increases response to substance | 3 |
| Quercetin | decreases reaction, increases response to substance, increases uptake, decreases activity | 3 |
| aristolochic acid I | decreases activity, increases activity, increases response to substance, decreases reaction, increases uptake (+2 more) | 2 |
| ochratoxin A | increases uptake, increases reaction | 2 |
| adipic acid | decreases reaction, increases response to substance, increases transport, affects cotreatment | 2 |
| methylmercury cysteine | increases transport | 2 |
| 2-amino-3-(2-amino-2-carboxyethylsulfanyl-mercuricsulfanyl)-propionic acid | decreases reaction, increases transport | 2 |
| Resveratrol | affects cotreatment, decreases expression, decreases reaction, increases uptake | 2 |
| Acetaminophen | decreases activity, decreases expression | 2 |
| Acetylcysteine | affects cotreatment, decreases reaction, increases response to substance, increases uptake, increases transport | 2 |
| Benzo(a)pyrene | affects methylation, decreases activity, increases methylation | 2 |
| Cisplatin | decreases expression | 2 |
| Ketoglutaric Acids | affects transport, decreases reaction, affects cotreatment, increases response to substance | 2 |
| Unithiol | increases uptake, increases reaction, increases secretion, decreases reaction | 2 |
| 2,4-Dichlorophenoxyacetic Acid | decreases reaction, increases uptake | 2 |
| aurantio-obtusin | decreases activity | 1 |
| bisphenol F | increases reaction, increases uptake | 1 |
| pyrazinoic acid | affects transport, decreases reaction | 1 |
| baicalein | decreases activity | 1 |
| bisphenol A | increases reaction, increases uptake | 1 |
ChEMBL screening assays
157 unique, capped per target: 94 functional, 39 binding, 22 admet, 2 toxicity
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1217025 | Binding | Inhibition of human OAT1 | alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) antagonists: from bench to bedside. — J Med Chem |
| CHEMBL1743147 | ADMET | Substrates of transporters of clinical importance in the absorption and disposition of drugs, OAT1 | Membrane transporters in drug development. — Nat Rev Drug Discov |
| CHEMBL2075808 | Functional | TP_TRANSPORTER: uptake in OAT1-expressing S2 cells | Human organic anion transporters and human organic cation transporters mediate renal transport of prostaglandins. — J Pharmacol Exp Ther |
Cellosaurus cell lines
3 cell lines: 1 conditionally immortalized cell line, 1 telomerase immortalized cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_LI01 | ciPTEC-OAT1 | Conditionally immortalized cell line | Female |
| CVCL_RM67 | RPTEC/TERT1 OAT1 | Telomerase immortalized cell line | Male |
| CVCL_UE07 | OAT1 HEK 293T/17 | Transformed cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Targeted by drugs: Probenecid