SLC25A48-AS1

Summary

SLC25A48-AS1 (SLC25A48 antisense RNA 1, HGNC:27965) is a long non-coding RNA gene on chromosome 5q31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27965
Approved symbol	SLC25A48-AS1
Name	SLC25A48 antisense RNA 1
Location	5q31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251045
Ensembl biotype	lncRNA
Entrez	340074
RNAcentral	URS000075C5AB — lncRNA, 2042 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000508452

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000508452 — 3 exons

Exon	Start	End
ENSE00002040200	135648584	135650523
ENSE00002042998	135652355	135652461
ENSE00002072882	135653842	135653935

Expression profiles

Bgee: expression breadth broad, 15 present calls, max score 85.88.

Top tissues by expression

159 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.88	gold quality
colonic epithelium	UBERON:0000397	70.63	silver quality
upper leg skin	UBERON:0004262	53.93	silver quality
sperm	CL:0000019	51.88	gold quality
sural nerve	UBERON:0015488	50.88	silver quality
uterine cervix	UBERON:0000002	50.26	silver quality
adult mammalian kidney	UBERON:0000082	46.68	gold quality
prefrontal cortex	UBERON:0000451	45.42	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
skin of hip	UBERON:0001554	43.01	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
kidney	UBERON:0002113	42.55	silver quality
blood	UBERON:0000178	42.12	gold quality
heart left ventricle	UBERON:0002084	41.97	gold quality
adrenal gland	UBERON:0002369	41.86	gold quality
skin of abdomen	UBERON:0001416	41.85	gold quality
skin of leg	UBERON:0001511	41.82	silver quality
zone of skin	UBERON:0000014	41.62	silver quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
cardiac ventricle	UBERON:0002082	41.15	gold quality
bone marrow	UBERON:0002371	41.14	gold quality
skeletal muscle tissue	UBERON:0001134	41.10	gold quality
palpebral conjunctiva	UBERON:0001812	41.10	gold quality
myometrium	UBERON:0001296	41.04	gold quality
heart	UBERON:0000948	41.02	gold quality
mucosa of paranasal sinus	UBERON:0005030	40.98	gold quality
Brodmann (1909) area 23	UBERON:0013554	40.84	gold quality
amniotic fluid	UBERON:0000173	40.69	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.