SLC26A9-AS1

Summary

SLC26A9-AS1 (SLC26A9 and RAB7B antisense RNA 1, HGNC:40686) is a long non-coding RNA gene on chromosome 1q32.1.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40686
Approved symbol	SLC26A9-AS1
Name	SLC26A9 and RAB7B antisense RNA 1
Location	1q32.1
Locus type	RNA, long non-coding
Status	Approved
Entrez	103021296
RNAcentral	URS000075A717 — lncRNA, 2404 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000052645 (1:205950715 G>A), RS1000104528 (1:205949682 G>A), RS1000293247 (1:205933653 G>A), RS1000404032 (1:205976981 G>T), RS1000433707 (1:205976688 C>T), RS1000446960 (1:205940706 T>C), RS1000526571 (1:205940996 C>T), RS1000541922 (1:205946631 C>A,T), RS1000601067 (1:205945456 G>T), RS1000669402 (1:205972274 C>A,T), RS1000677569 (1:205935142 A>C,G), RS1000733444 (1:205978346 C>T), RS1000738687 (1:205971017 A>T), RS1000764932 (1:205978050 G>A,C), RS1000903535 (1:205966821 T>A,G)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

CTD chemical–gene interactions

1 total (human), top 1 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
Smoke	increases expression	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.