SLC35F4-AS1

Summary

SLC35F4-AS1 (SLC35F4 antisense RNA 1, HGNC:58292) is a long non-coding RNA gene on chromosome 14q22.3-q23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58292
Approved symbol	SLC35F4-AS1
Name	SLC35F4 antisense RNA 1
Location	14q22.3-q23.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259039
Ensembl biotype	lncRNA
Entrez	105370518
RNAcentral	URS0000EF10B5 — lncRNA, 1436 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000555600, ENST00000647916, ENST00000655475

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000555600 — 2 exons

Exon	Start	End
ENSE00002491862	57578632	57579005
ENSE00002532281	57580987	57581320

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 85.45.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.45	gold quality
cerebellar cortex	UBERON:0002129	63.64	gold quality
cerebellum	UBERON:0002037	63.56	gold quality
cerebellar hemisphere	UBERON:0002245	63.50	gold quality
islet of Langerhans	UBERON:0000006	62.85	gold quality
right hemisphere of cerebellum	UBERON:0014890	62.50	gold quality
cortical plate	UBERON:0005343	59.62	gold quality
cortex of kidney	UBERON:0001225	58.87	gold quality
skeletal muscle tissue	UBERON:0001134	58.46	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	58.11	gold quality
kidney	UBERON:0002113	56.94	gold quality
pancreas	UBERON:0001264	55.85	gold quality
adult mammalian kidney	UBERON:0000082	55.34	gold quality
right ovary	UBERON:0002118	55.06	gold quality
metanephros cortex	UBERON:0010533	55.03	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.31	silver quality
stromal cell of endometrium	CL:0002255	54.19	silver quality
monocyte	CL:0000576	54.04	gold quality
gall bladder	UBERON:0002110	53.91	gold quality
calcaneal tendon	UBERON:0003701	53.91	gold quality
myometrium	UBERON:0001296	53.88	gold quality
ovary	UBERON:0000992	53.34	gold quality
endometrium	UBERON:0001295	53.25	gold quality
prefrontal cortex	UBERON:0000451	53.17	gold quality
left ovary	UBERON:0002119	52.62	gold quality
vermiform appendix	UBERON:0001154	52.50	gold quality
bone marrow	UBERON:0002371	52.16	silver quality
duodenum	UBERON:0002114	51.79	gold quality
liver	UBERON:0002107	51.55	gold quality
ectocervix	UBERON:0012249	51.51	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.