SLC37A4
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Also known as GSD1bGSD1cGSD1dG6PTSPX4
Summary
SLC37A4 (solute carrier family 37 member 4, HGNC:4061) is a protein-coding gene on chromosome 11q23.3, encoding Glucose-6-phosphate exchanger SLC37A4 (O43826). Inorganic phosphate and glucose-6-phosphate antiporter of the endoplasmic reticulum.
This gene regulates glucose-6-phosphate transport from the cytoplasm to the lumen of the endoplasmic reticulum, in order to maintain glucose homeostasis. It also plays a role in ATP-mediated calcium sequestration in the lumen of the endoplasmic reticulum. Mutations in this gene have been associated with various forms of glycogen storage disease. Alternative splicing in this gene results in multiple transcript variants.
Source: NCBI Gene 2542 — RefSeq curated summary.
At a glance
- Gene–disease (curated): glycogen storage disease type 1 due to SLC37A4 mutation (Definitive, GenCC) — +2 more curated relationships
- Clinical variants (ClinVar): 1,143 total — 88 pathogenic, 65 likely-pathogenic
- Phenotypes (HPO): 145
- Druggable target: yes
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity no evidence
- MANE Select transcript:
NM_001164277
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4061 |
| Approved symbol | SLC37A4 |
| Name | solute carrier family 37 member 4 |
| Location | 11q23.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | GSD1b, GSD1c, GSD1d, G6PT, SPX4 |
| Ensembl gene | ENSG00000137700 |
| Ensembl biotype | protein_coding |
| OMIM | 602671 |
| Entrez | 2542 |
Gene structure
Transcript identifiers
Ensembl transcripts: 27 — 12 protein_coding_CDS_not_defined, 11 retained_intron, 4 protein_coding
ENST00000330775, ENST00000357590, ENST00000524428, ENST00000525039, ENST00000525102, ENST00000525372, ENST00000525787, ENST00000526275, ENST00000526626, ENST00000527992, ENST00000529510, ENST00000530407, ENST00000532085, ENST00000532888, ENST00000534384, ENST00000538950, ENST00000545985, ENST00000638186, ENST00000638925, ENST00000650539, ENST00000697845, ENST00000697846, ENST00000697847, ENST00000697848, ENST00000697849, ENST00000697850, ENST00000697851
RefSeq mRNA: 5 — MANE Select: NM_001164277
NM_001164277, NM_001164278, NM_001164279, NM_001164280, NM_001467
Canonical transcript exons
ENST00000545985 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001273714 | 119027628 | 119027724 |
| ENSE00001273889 | 119027726 | 119027872 |
| ENSE00002144586 | 119030232 | 119030735 |
| ENSE00002173179 | 119030849 | 119030906 |
| ENSE00003485364 | 119029222 | 119029564 |
| ENSE00003538303 | 119025967 | 119026080 |
| ENSE00003549654 | 119025191 | 119025329 |
| ENSE00003573641 | 119026603 | 119026688 |
| ENSE00003624719 | 119026937 | 119027095 |
| ENSE00003632987 | 119028194 | 119028426 |
| ENSE00003739767 | 119024351 | 119025076 |
Expression profiles
Bgee: expression breadth ubiquitous, 134 present calls, max score 97.74.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 10.4352 / max 104.2428, expressed in 1716 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 122663 | 9.4032 | 1708 |
| 122662 | 0.5879 | 302 |
| 122660 | 0.2015 | 36 |
| 122658 | 0.1290 | 55 |
| 122659 | 0.0710 | 28 |
| 122661 | 0.0426 | 17 |
Top tissues by expression
134 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right lobe of liver | UBERON:0001114 | 97.74 | gold quality |
| liver | UBERON:0002107 | 97.08 | gold quality |
| duodenum | UBERON:0002114 | 97.07 | gold quality |
| body of pancreas | UBERON:0001150 | 96.20 | gold quality |
| pancreas | UBERON:0001264 | 95.40 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 95.18 | gold quality |
| islet of Langerhans | UBERON:0000006 | 94.71 | gold quality |
| kidney | UBERON:0002113 | 93.55 | gold quality |
| cortex of kidney | UBERON:0001225 | 92.78 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 92.77 | gold quality |
| gastrocnemius | UBERON:0001388 | 92.66 | gold quality |
| rectum | UBERON:0001052 | 92.43 | gold quality |
| metanephros cortex | UBERON:0010533 | 92.41 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 92.38 | gold quality |
| muscle of leg | UBERON:0001383 | 92.36 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 92.14 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 92.04 | gold quality |
| small intestine | UBERON:0002108 | 91.65 | gold quality |
| right uterine tube | UBERON:0001302 | 90.94 | gold quality |
| muscle tissue | UBERON:0002385 | 90.14 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 89.44 | gold quality |
| gall bladder | UBERON:0002110 | 89.43 | gold quality |
| transverse colon | UBERON:0001157 | 89.42 | gold quality |
| body of stomach | UBERON:0001161 | 88.90 | gold quality |
| stomach | UBERON:0000945 | 87.19 | gold quality |
| intestine | UBERON:0000160 | 87.11 | gold quality |
| fundus of stomach | UBERON:0001160 | 87.06 | gold quality |
| ventricular zone | UBERON:0003053 | 86.73 | gold quality |
| right adrenal gland | UBERON:0001233 | 86.52 | gold quality |
| fallopian tube | UBERON:0003889 | 86.42 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-10 | yes | 29.42 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): FOXO1, NR3C1
miRNA regulators (miRDB)
30 targeting SLC37A4, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-7162-3P | 99.89 | 68.16 | 1682 |
| HSA-MIR-6124 | 99.87 | 69.78 | 3551 |
| HSA-MIR-202-3P | 99.84 | 71.41 | 1290 |
| HSA-MIR-3121-3P | 99.82 | 71.96 | 3630 |
| HSA-MIR-4694-3P | 99.79 | 69.53 | 2640 |
| HSA-MIR-92A-2-5P | 99.75 | 67.01 | 2164 |
| HSA-MIR-298 | 99.63 | 67.56 | 1916 |
| HSA-MIR-1260A | 99.61 | 66.67 | 1098 |
| HSA-MIR-1260B | 99.61 | 66.67 | 1098 |
| HSA-MIR-7152-5P | 99.60 | 69.33 | 2094 |
| HSA-MIR-4762-5P | 99.57 | 68.54 | 1424 |
| HSA-MIR-4753-5P | 99.54 | 68.51 | 1356 |
| HSA-MIR-4441 | 99.49 | 66.56 | 3216 |
| HSA-MIR-6722-3P | 99.45 | 67.62 | 1919 |
| HSA-MIR-940 | 99.37 | 66.14 | 2064 |
| HSA-MIR-6808-5P | 99.31 | 66.23 | 2150 |
| HSA-MIR-6893-5P | 99.31 | 66.25 | 2119 |
| HSA-MIR-196A-3P | 99.19 | 67.34 | 1204 |
| HSA-MIR-1909-3P | 99.03 | 66.56 | 1662 |
| HSA-MIR-12135 | 98.99 | 70.26 | 1814 |
| HSA-MIR-4252 | 98.45 | 66.37 | 987 |
| HSA-MIR-4294 | 97.86 | 65.72 | 1110 |
| HSA-MIR-3127-5P | 97.52 | 65.24 | 786 |
| HSA-MIR-1224-3P | 97.24 | 65.92 | 851 |
| HSA-MIR-3139 | 96.68 | 66.77 | 652 |
| HSA-MIR-3135A | 96.41 | 65.30 | 494 |
| HSA-MIR-28-5P | 96.16 | 66.12 | 579 |
| HSA-MIR-3918 | 96.13 | 64.65 | 1300 |
| HSA-MIR-524-3P | 95.15 | 66.16 | 109 |
| HSA-MIR-525-3P | 95.15 | 65.95 | 109 |
Functional genomics
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 23)
- operates by a similar antiport mechanism as its E. coli homologue, namely, the substrate binds at the N- and C-terminal domain interface and is then transported across the membrane via a rocker-switch type of movement of the two domains (PMID:15260472)
- mutational analysis of G6PT1 in type I glycogen storage disease (PMID:16435186)
- Overexpression of recombinant glucose-6-phosphate translocase rescued the cells from curcumin-induced cell death [ glucose-6-phosphate translocase] (PMID:16777101)
- A novel G6PT1 promoter polymorphism, 259C –> T was found; the - 259*T allele frequency was greater in term SIDS infants than in term control infants and preterm SIDS infants (PMID:17354259)
- A molecular signaling axis regulates the invasive phenotype of brain tumor cells and highlights a new bioswitch function for glucose-6-phosphate transporter (G6PT) in cell survival. (PMID:17460777)
- Targeted inhibition of either MT1-MMP or G6PT may lead to reduced infiltrative and invasive properties of brain tumor cells. (PMID:18267120)
- Human G6PT contains 10-transmembrane helices and is more probable than the bacterial Uhp that contains 12-transmembrane helices. (PMID:19008136)
- Our results suggest that in Sardinia, Glycogen storage disease Ib is caused by only one mutational event in the G6PT gene, further suggesting that Sardinia is a founder population. (PMID:20578944)
- Two novel mutations were identified in these samples: one had a novel mutation (25C>T); the remaining sample carried a 49 bp deletion in intron 12. (PMID:21446359)
- A total of 11 SLC37A4 gene mutations were identified in 15 families of the mainland of China. The frequent mutations are p.Pro191Leu, p.Gly149Glu and c.870 + 5G > A. (PMID:21575371)
- Five SLC37A4 gene mutations were detected in 7 (25%) of the 28 children (PMID:23965881)
- Data suggest that G6PT modulates autophagy independent of its transport activity; G6PT appears to up-regulate autophagy via inactivation of mTORC1; knockdown of G6PT expression activates mTORC1 (mechanistic target of rapamycin complex 1) activity. (PMID:25982172)
- Post-translational regulation of the glucose-6-phosphatase complex by cyclic AMP is a crucial determinant of endogenous glucose production and is controlled by the glucose-6-phosphate transporter. (PMID:26958868)
- The most common mutation of SLC37A4 genes identified in Korean patients was c.443C>T (p.Ala148Val), accounting for 55.6% (5/9 patients) of all GSD Ib patients and 38.9% of the tested alleles (PMID:28224773)
- We report the MFRP-related ocular phenotype in three siblings with glycogen storage disease type 1b. Molecular genetic studies identified novel mutations in the MFRP and SLC37A4 genes. (PMID:28511025)
- In SLC37A4 gene, 6 variants were detected. Three previously reported variants c.81T>A (p.Asn27Lys), c.162C>A (p.Ser54Arg) and c.1042_1043delCT (p.Leu348Valfs*53) accounted for 87% of all analyzed alleles. Computational, transcription studies and/or clinical presentation in patients confirmed pathogenic effect of 3 novel variants. (PMID:28685844)
- Study demonstrates that G6PT is essential for proliferation and differentiation of adipose-derived mesenchymal stem cells , providing important insights into the GSD-Ib phenotypes. (PMID:29238966)
- Study established a cellular model system characterized by a deficiency of SLC37A4, which presents pathological manifestations of GSD Ib in the kidney. Expression analysis in a novel model system supports the hypothesis that renal dysfunction in the GSD Ib is partly due to the ER stress and increased apoptosis. (PMID:30951856)
- Genotype-phenotype correlation and description of two novel mutations in Iranian patients with glycogen storage disease 1b (GSD1b). (PMID:32005221)
- A novel SLC37A4 missense mutation in GSD-Ib without hepatomegaly causes enhanced leukocytes endoplasmic reticulum stress and apoptosis. (PMID:33280276)
- A mutation in SLC37A4 causes a dominantly inherited congenital disorder of glycosylation characterized by liver dysfunction. (PMID:33964207)
- Three novel SLC37A4 variants in glycogen storage disease type 1b and a literature review. (PMID:38087503)
- SLC37A4, gene responsible for glycogen storage disease type 1b, regulates gingival epithelial barrier function via JAM1 expression. (PMID:39433915)
Cross-species orthologs
51 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | slc37a4a | ENSDARG00000038106 |
| mus_musculus | Slc37a4 | ENSMUSG00000032114 |
| rattus_norvegicus | Slc37a4 | ENSRNOG00000011361 |
| drosophila_melanogaster | dmGlut | FBGN0010497 |
| drosophila_melanogaster | MFS14 | FBGN0010651 |
| drosophila_melanogaster | Picot | FBGN0024315 |
| drosophila_melanogaster | CG9254 | FBGN0028513 |
| drosophila_melanogaster | CG6978 | FBGN0029727 |
| drosophila_melanogaster | VGlut | FBGN0031424 |
| drosophila_melanogaster | CG7881 | FBGN0033048 |
| drosophila_melanogaster | MFS12 | FBGN0033234 |
| drosophila_melanogaster | MFS15 | FBGN0034392 |
| drosophila_melanogaster | CG15096 | FBGN0034394 |
| drosophila_melanogaster | MFS16 | FBGN0034611 |
| drosophila_melanogaster | CG12490 | FBGN0034782 |
| drosophila_melanogaster | CG9825 | FBGN0034783 |
| drosophila_melanogaster | CG9826 | FBGN0034784 |
| drosophila_melanogaster | CG3649 | FBGN0034785 |
| drosophila_melanogaster | CG2003 | FBGN0039886 |
| drosophila_melanogaster | CG30265 | FBGN0050265 |
| drosophila_melanogaster | MFS1 | FBGN0050272 |
| caenorhabditis_elegans | WBGENE00001135 | |
| caenorhabditis_elegans | WBGENE00007669 | |
| caenorhabditis_elegans | WBGENE00008000 | |
| caenorhabditis_elegans | WBGENE00008677 | |
| caenorhabditis_elegans | WBGENE00010755 | |
| caenorhabditis_elegans | WBGENE00010931 | |
| caenorhabditis_elegans | WBGENE00011185 | |
| caenorhabditis_elegans | WBGENE00011556 | |
| caenorhabditis_elegans | WBGENE00012443 | |
| caenorhabditis_elegans | WBGENE00015271 | |
| caenorhabditis_elegans | WBGENE00015272 | |
| caenorhabditis_elegans | WBGENE00016003 | |
| caenorhabditis_elegans | WBGENE00018429 | |
| caenorhabditis_elegans | WBGENE00018918 | |
| caenorhabditis_elegans | WBGENE00018920 | |
| caenorhabditis_elegans | WBGENE00019187 | |
| caenorhabditis_elegans | WBGENE00019655 | |
| caenorhabditis_elegans | WBGENE00020583 | |
| caenorhabditis_elegans | WBGENE00020584 | |
| caenorhabditis_elegans | WBGENE00020697 | |
| caenorhabditis_elegans | WBGENE00020698 | |
| caenorhabditis_elegans | WBGENE00020699 | |
| caenorhabditis_elegans | WBGENE00020700 | |
| caenorhabditis_elegans | WBGENE00021157 | |
| caenorhabditis_elegans | WBGENE00021158 | |
| caenorhabditis_elegans | WBGENE00021219 | |
| caenorhabditis_elegans | WBGENE00021220 | |
| caenorhabditis_elegans | WBGENE00021223 | |
| caenorhabditis_elegans | WBGENE00021226 | |
| caenorhabditis_elegans | WBGENE00302978 |
Paralogs (12): SLC17A6 (ENSG00000091664), SLC17A9 (ENSG00000101194), SLC17A7 (ENSG00000104888), SLC17A2 (ENSG00000112337), SLC17A5 (ENSG00000119899), SLC17A3 (ENSG00000124564), SLC17A1 (ENSG00000124568), SLC37A2 (ENSG00000134955), SLC17A4 (ENSG00000146039), SLC37A3 (ENSG00000157800), SLC37A1 (ENSG00000160190), SLC17A8 (ENSG00000179520)
Protein
Protein identifiers
Glucose-6-phosphate exchanger SLC37A4 — O43826 (reviewed: O43826)
Alternative names: Glucose-5-phosphate transporter, Glucose-6-phosphate translocase, Solute carrier family 37 member 4, Transformation-related gene 19 protein
All UniProt accessions (3): U3KPU7, U3KQL4, U3KQS2
UniProt curated annotations — full annotation on UniProt →
Function. Inorganic phosphate and glucose-6-phosphate antiporter of the endoplasmic reticulum. Transports cytoplasmic glucose-6-phosphate into the lumen of the endoplasmic reticulum and translocates inorganic phosphate into the opposite direction. Forms with glucose-6-phosphatase the complex responsible for glucose production through glycogenolysis and gluconeogenesis. Hence, it plays a central role in homeostatic regulation of blood glucose levels.
Subcellular location. Endoplasmic reticulum membrane.
Tissue specificity. Mostly expressed in liver and kidney.
Disease relevance. Glycogen storage disease 1B (GSD1B) [MIM:232220] A metabolic disorder characterized by impairment of terminal steps of glycogenolysis and gluconeogenesis. Patients manifest a wide range of clinical symptoms and biochemical abnormalities, including hypoglycemia, severe hepatomegaly due to excessive accumulation of glycogen, kidney enlargement, growth retardation, lactic acidemia, hyperlipidemia, and hyperuricemia. Glycogen storage disease type 1B patients also present a tendency towards infections associated with neutropenia, relapsing aphthous gingivostomatitis, and inflammatory bowel disease. The disease is caused by variants affecting the gene represented in this entry. Glycogen storage disease 1C (GSD1C) [MIM:232240] A metabolic disorder characterized by impairment of terminal steps of glycogenolysis and gluconeogenesis. Patients manifest a wide range of clinical symptoms and biochemical abnormalities, including hypoglycemia, severe hepatomegaly due to excessive accumulation of glycogen, kidney enlargement, growth retardation, lactic acidemia, hyperlipidemia, and hyperuricemia. The disease is caused by variants affecting the gene represented in this entry. Glycogen storage disease 1D (GSD1D) [MIM:232240] A metabolic disorder characterized by impairment of terminal steps of glycogenolysis and gluconeogenesis. Patients manifest a wide range of clinical symptoms and biochemical abnormalities, including hypoglycemia, severe hepatomegaly due to excessive accumulation of glycogen, kidney enlargement, growth retardation, lactic acidemia, hyperlipidemia, and hyperuricemia. The disease is caused by variants affecting the gene represented in this entry. Congenital disorder of glycosylation 2W (CDG2W) [MIM:619525] A form of congenital disorder of glycosylation, a genetically heterogeneous group of multisystem disorders caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. CDG2W is an autosomal dominant disorder characterized by liver dysfunction and coagulation deficiencies. The disease is caused by variants affecting the gene represented in this entry.
Activity regulation. Inhibited by vanadate and chlorogenic acid.
Similarity. Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| O43826-1 | 1 | yes |
| O43826-2 | 2 |
RefSeq proteins (5): NP_001157749, NP_001157750, NP_001157751, NP_001157752, NP_001458 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000849 | Sugar_P_transporter | Family |
| IPR011701 | MFS | Family |
| IPR020846 | MFS_dom | Domain |
| IPR021159 | Sugar-P_transporter_CS | Conserved_site |
| IPR036259 | MFS_trans_sf | Homologous_superfamily |
| IPR051337 | OPA_Antiporter | Family |
Pfam: PF07690
Catalyzed reactions (Rhea), 1 shown:
- D-glucose 6-phosphate(in) + phosphate(out) = D-glucose 6-phosphate(out) + phosphate(in) (RHEA:71535)
UniProt features (48 total): sequence variant 35, transmembrane region 10, chain 1, splice variant 1, sequence conflict 1
Structure
Experimental structures (PDB)
25 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 21NQ | ELECTRON MICROSCOPY | 2.8 |
| 21OR | ELECTRON MICROSCOPY | 2.8 |
| 9LL1 | ELECTRON MICROSCOPY | 2.82 |
| 9X8X | ELECTRON MICROSCOPY | 2.89 |
| 9X97 | ELECTRON MICROSCOPY | 2.89 |
| 9UGU | ELECTRON MICROSCOPY | 3.07 |
| 9XCB | ELECTRON MICROSCOPY | 3.08 |
| 9WT2 | ELECTRON MICROSCOPY | 3.12 |
| 9LNB | ELECTRON MICROSCOPY | 3.15 |
| 9UGX | ELECTRON MICROSCOPY | 3.16 |
| 9W1N | ELECTRON MICROSCOPY | 3.2 |
| 9W1O | ELECTRON MICROSCOPY | 3.2 |
| 9W1Q | ELECTRON MICROSCOPY | 3.2 |
| 9XCA | ELECTRON MICROSCOPY | 3.27 |
| 9LL0 | ELECTRON MICROSCOPY | 3.28 |
| 21NP | ELECTRON MICROSCOPY | 3.3 |
| 9KV0 | ELECTRON MICROSCOPY | 3.4 |
| 9W1P | ELECTRON MICROSCOPY | 3.4 |
| 9W1R | ELECTRON MICROSCOPY | 3.4 |
| 9LVW | ELECTRON MICROSCOPY | 3.41 |
| 9WS8 | ELECTRON MICROSCOPY | 3.47 |
| 9UGY | ELECTRON MICROSCOPY | 3.5 |
| 9X95 | ELECTRON MICROSCOPY | 3.5 |
| 9KUY | ELECTRON MICROSCOPY | 3.6 |
| 9KVV | ELECTRON MICROSCOPY | 3.6 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O43826-F1 | 85.89 | 0.39 |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-3229133 | Glycogen storage disease type Ib (SLC37A4) |
| R-HSA-70263 | Gluconeogenesis |
MSigDB gene sets: 524 (showing top):
BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN, MOOTHA_GLYCOGEN_METABOLISM, MYOGENIN_Q6, ATACCTC_MIR202, GOBP_INORGANIC_ANION_TRANSPORT, MITSIADES_RESPONSE_TO_APLIDIN_DN, LHX3_01, CHX10_01, GGGTGGRR_PAX4_03, LEE_LIVER_CANCER_CIPROFIBRATE_DN, GOBP_ORGANOPHOSPHATE_ESTER_TRANSPORT, EVI1_05, GOBP_SMALL_MOLECULE_BIOSYNTHETIC_PROCESS, NKX62_Q2, UEDA_PERIFERAL_CLOCK
GO Biological Process (20): glucose metabolic process (GO:0006006), gluconeogenesis (GO:0006094), glucose-6-phosphate transport (GO:0015760), phosphate ion transmembrane transport (GO:0035435), glucose homeostasis (GO:0042593), neutrophil homeostasis (GO:0001780), myeloid progenitor cell differentiation (GO:0002318), glycogen metabolic process (GO:0005977), lactate metabolic process (GO:0006089), triglyceride metabolic process (GO:0006641), intracellular calcium ion homeostasis (GO:0006874), response to nutrient (GO:0007584), steroid metabolic process (GO:0008202), response to glucose (GO:0009749), neutrophil chemotaxis (GO:0030593), negative regulation of chemokine production (GO:0032682), post-embryonic hemopoiesis (GO:0035166), cholesterol homeostasis (GO:0042632), respiratory burst (GO:0045730), transmembrane transport (GO:0055085)
GO Molecular Function (3): glucose-6-phosphate transmembrane transporter activity (GO:0015152), glucose 6-phosphate:phosphate antiporter activity (GO:0061513), transmembrane transporter activity (GO:0022857)
GO Cellular Component (5): endoplasmic reticulum (GO:0005783), endoplasmic reticulum membrane (GO:0005789), membrane (GO:0016020), endomembrane system (GO:0012505), organelle membrane (GO:0031090)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Glycogen storage diseases | 1 |
| Glucose metabolism | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| transmembrane transport | 2 |
| cellular anatomical structure | 2 |
| hexose metabolic process | 1 |
| glucose metabolic process | 1 |
| hexose biosynthetic process | 1 |
| hexose phosphate transport | 1 |
| phosphate ion transport | 1 |
| carbohydrate homeostasis | 1 |
| leukocyte homeostasis | 1 |
| myeloid cell homeostasis | 1 |
| hematopoietic progenitor cell differentiation | 1 |
| energy reserve metabolic process | 1 |
| glucan metabolic process | 1 |
| monocarboxylic acid metabolic process | 1 |
| acylglycerol metabolic process | 1 |
| intracellular monoatomic cation homeostasis | 1 |
| calcium ion homeostasis | 1 |
| response to nutrient levels | 1 |
| response to chemical | 1 |
| lipid metabolic process | 1 |
| response to hexose | 1 |
| granulocyte chemotaxis | 1 |
| neutrophil migration | 1 |
| negative regulation of cytokine production | 1 |
| chemokine production | 1 |
| regulation of chemokine production | 1 |
| post-embryonic development | 1 |
| hemopoiesis | 1 |
| sterol homeostasis | 1 |
| metabolic process | 1 |
| transport | 1 |
| cellular process | 1 |
| hexose phosphate transmembrane transporter activity | 1 |
| glucose-6-phosphate transport | 1 |
| glucose-6-phosphate transmembrane transporter activity | 1 |
| hexose-phosphate:phosphate antiporter activity | 1 |
| transporter activity | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
1156 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| SLC37A4 | G6PC1 | P35575 | 972 |
| SLC37A4 | G6PC3 | Q9BUM1 | 893 |
| SLC37A4 | G6PC2 | Q9NQR9 | 825 |
| SLC37A4 | SLC17A3 | O00476 | 799 |
| SLC37A4 | CSF3 | P09919 | 716 |
| SLC37A4 | FXYD2 | P54710 | 654 |
| SLC37A4 | GYS2 | P54840 | 642 |
| SLC37A4 | AGL | P35573 | 592 |
| SLC37A4 | PHKB | Q93100 | 576 |
| SLC37A4 | JAGN1 | Q8N5M9 | 571 |
| SLC37A4 | GBE1 | Q04446 | 550 |
| SLC37A4 | GCG | P01275 | 530 |
| SLC37A4 | SLC20A1 | Q8WUM9 | 526 |
| SLC37A4 | PHKA2 | P46019 | 513 |
| SLC37A4 | PHKG2 | P11800 | 507 |
IntAct
21 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| SLC37A4 | BIK | psi-mi:“MI:0915”(physical association) | 0.560 |
| VTN | HAT1 | psi-mi:“MI:0914”(association) | 0.530 |
| EVA1B | NRP1 | psi-mi:“MI:0914”(association) | 0.530 |
| SLC37A4 | ZNRF2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| SLC37A4 | GPR35 | psi-mi:“MI:0915”(physical association) | 0.370 |
| LRRK2 | psi-mi:“MI:0914”(association) | 0.350 | |
| DENND11 | psi-mi:“MI:0914”(association) | 0.350 | |
| ARL3 | TRAPPC13 | psi-mi:“MI:0914”(association) | 0.350 |
| TSPAN15 | TMEM223 | psi-mi:“MI:0914”(association) | 0.350 |
| EVA1B | TMEM131L | psi-mi:“MI:0914”(association) | 0.350 |
| ASPH | POTEF | psi-mi:“MI:0914”(association) | 0.350 |
| SLC37A4 | KLK10 | psi-mi:“MI:0914”(association) | 0.350 |
| HAVCR2 | LGALS8 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC37A4 | PGRMC1 | psi-mi:“MI:0914”(association) | 0.350 |
| P/V | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| TCTN3 | TMEM120B | psi-mi:“MI:2364”(proximity) | 0.270 |
| BUD13 | RPSA2 | psi-mi:“MI:2364”(proximity) | 0.270 |
| SLC37A4 | BIK | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (65): SLC37A4 (Proximity Label-MS), SLC37A4 (PCA), SLC37A4 (Two-hybrid), SLC37A4 (Affinity Capture-MS), SLC37A4 (Affinity Capture-MS), SLC37A4 (Proximity Label-MS), SLC37A4 (Proximity Label-MS), SLC37A4 (Two-hybrid), SLC37A4 (Affinity Capture-MS), ACPP (Affinity Capture-MS), LGALS7B (Affinity Capture-MS), SDR9C7 (Affinity Capture-MS), IL36G (Affinity Capture-MS), TYMP (Affinity Capture-MS), CALML3 (Affinity Capture-MS)
ESM2 similar proteins: A1L1W9, F4IKF6, O43826, P09836, P27669, P30638, P42432, P58355, Q03411, Q0VA82, Q10R54, Q1LVS8, Q2QWW7, Q2V4B9, Q39231, Q39232, Q3E9A0, Q3TIT8, Q3U9N9, Q4LE88, Q53P54, Q53WP9, Q5F3N0, Q63564, Q640L2, Q66GI9, Q67YF8, Q6A329, Q6GPQ3, Q6NMN6, Q6PB15, Q7L1I2, Q7XJR2, Q8BG39, Q8NCC5, Q8RWQ5, Q8W0H5, Q91Y77, Q944W2, Q948L0
Diamond homologs: O43826, O84548, Q9PJJ8, Q9Z7N9, P08194, P09836, P0AGC0, P0AGC1, P0AGC2, P12681, P27669, P27670, P37948, P96335
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
1143 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 88 |
| Likely pathogenic | 65 |
| Uncertain significance | 456 |
| Likely benign | 410 |
| Benign | 33 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1068726 | NC_000011.9:g.(?118899922)(118900089_?)del | Pathogenic |
| 1076442 | NM_001164277.2(SLC37A4):c.1178G>A (p.Trp393Ter) | Pathogenic |
| 1076502 | NM_001164277.2(SLC37A4):c.925del (p.Ala309fs) | Pathogenic |
| 1076732 | NM_001164277.2(SLC37A4):c.494G>A (p.Trp165Ter) | Pathogenic |
| 1192881 | NM_001164277.2(SLC37A4):c.786-3_787del | Pathogenic |
| 1356284 | NM_001164277.2(SLC37A4):c.340C>T (p.Gln114Ter) | Pathogenic |
| 1364508 | NM_001164277.2(SLC37A4):c.71_74dup (p.Tyr25Ter) | Pathogenic |
| 1426093 | NM_001164277.2(SLC37A4):c.11del (p.Gln4fs) | Pathogenic |
| 1454012 | NM_001164277.2(SLC37A4):c.335dup (p.Ala113fs) | Pathogenic |
| 1454284 | NM_001164277.2(SLC37A4):c.528_530del (p.Cys176_Val177delinsTrp) | Pathogenic |
| 1460441 | NM_001164277.2(SLC37A4):c.1049_1052del (p.Gly350fs) | Pathogenic |
| 1514493 | NM_001164277.2(SLC37A4):c.1124+1G>T | Pathogenic |
| 188762 | NM_001164277.2(SLC37A4):c.742C>T (p.Gln248Ter) | Pathogenic |
| 189028 | NM_001164277.2(SLC37A4):c.381+1G>A | Pathogenic |
| 189162 | NM_001164277.2(SLC37A4):c.1A>G (p.Met1Val) | Pathogenic |
| 2011304 | NM_001164277.2(SLC37A4):c.778del (p.Leu260_Val261insTer) | Pathogenic |
| 2073022 | NM_001164277.2(SLC37A4):c.593del (p.Asn198fs) | Pathogenic |
| 2103538 | NM_001164277.2(SLC37A4):c.751dup (p.Leu251fs) | Pathogenic |
| 2104175 | NM_001164277.2(SLC37A4):c.962_963del (p.Thr321fs) | Pathogenic |
| 2107823 | NM_001164277.2(SLC37A4):c.686del (p.Leu229fs) | Pathogenic |
| 2113017 | NM_001164277.2(SLC37A4):c.1028_1036delinsTGCCTCG (p.Tyr343fs) | Pathogenic |
| 2633101 | NM_001164277.2(SLC37A4):c.1035dup (p.Ile346fs) | Pathogenic |
| 2678949 | NM_001164277.2(SLC37A4):c.986-1G>C | Pathogenic |
| 2678951 | NM_001164277.2(SLC37A4):c.320G>A (p.Trp107Ter) | Pathogenic |
| 2678955 | NM_001164277.2(SLC37A4):c.576dup (p.Asp193Ter) | Pathogenic |
| 2678958 | NM_001164277.2(SLC37A4):c.872-7_873dup | Pathogenic |
| 2678959 | NM_001164277.2(SLC37A4):c.795C>G (p.Tyr265Ter) | Pathogenic |
| 2678960 | NM_001164277.2(SLC37A4):c.1124+1G>A | Pathogenic |
| 2701036 | NM_001164277.2(SLC37A4):c.989G>A (p.Trp330Ter) | Pathogenic |
| 2707017 | NM_001164277.2(SLC37A4):c.713del (p.Gly238fs) | Pathogenic |
SpliceAI
1506 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:119025073:CCCA:C | acceptor_gain | 1.0000 |
| 11:119025074:CCA:C | acceptor_gain | 1.0000 |
| 11:119025074:CCAC:C | acceptor_gain | 1.0000 |
| 11:119025075:CA:C | acceptor_gain | 1.0000 |
| 11:119025075:CAC:C | acceptor_gain | 1.0000 |
| 11:119025077:C:CC | acceptor_gain | 1.0000 |
| 11:119025186:CTTA:C | donor_loss | 1.0000 |
| 11:119025187:TTAC:T | donor_loss | 1.0000 |
| 11:119025188:TACC:T | donor_loss | 1.0000 |
| 11:119025189:A:AC | donor_gain | 1.0000 |
| 11:119025189:AC:A | donor_gain | 1.0000 |
| 11:119025189:ACCAT:A | donor_loss | 1.0000 |
| 11:119025190:C:CC | donor_gain | 1.0000 |
| 11:119025190:C:G | donor_loss | 1.0000 |
| 11:119025190:CC:C | donor_gain | 1.0000 |
| 11:119025190:CCA:C | donor_gain | 1.0000 |
| 11:119025190:CCATT:C | donor_gain | 1.0000 |
| 11:119025325:CAGAG:C | acceptor_gain | 1.0000 |
| 11:119025327:GAG:G | acceptor_gain | 1.0000 |
| 11:119025328:AG:A | acceptor_gain | 1.0000 |
| 11:119025330:C:CA | acceptor_loss | 1.0000 |
| 11:119025330:C:CC | acceptor_gain | 1.0000 |
| 11:119025331:T:A | acceptor_loss | 1.0000 |
| 11:119025334:C:CT | acceptor_gain | 1.0000 |
| 11:119025335:A:T | acceptor_gain | 1.0000 |
| 11:119025962:ATTAC:A | donor_loss | 1.0000 |
| 11:119025963:TTA:T | donor_loss | 1.0000 |
| 11:119025964:TA:T | donor_loss | 1.0000 |
| 11:119025966:C:A | donor_loss | 1.0000 |
| 11:119026076:CCCGC:C | acceptor_gain | 1.0000 |
AlphaMissense
2773 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:119025298:C:T | G339D | 0.999 |
| 11:119026646:C:T | G276D | 0.999 |
| 11:119027842:A:G | W138R | 0.999 |
| 11:119027842:A:T | W138R | 0.999 |
| 11:119028413:G:C | S54R | 0.999 |
| 11:119028413:G:T | S54R | 0.999 |
| 11:119028415:T:G | S54R | 0.999 |
| 11:119025021:C:A | W393C | 0.998 |
| 11:119025021:C:G | W393C | 0.998 |
| 11:119025256:G:T | A353D | 0.998 |
| 11:119025265:C:T | G350E | 0.998 |
| 11:119025299:C:G | G339R | 0.998 |
| 11:119025311:C:G | G335R | 0.998 |
| 11:119025311:C:T | G335R | 0.998 |
| 11:119026619:T:A | D285V | 0.998 |
| 11:119026619:T:G | D285A | 0.998 |
| 11:119026620:C:G | D285H | 0.998 |
| 11:119026647:C:G | G276R | 0.998 |
| 11:119026983:C:A | W246C | 0.998 |
| 11:119026983:C:G | W246C | 0.998 |
| 11:119026985:A:G | W246R | 0.998 |
| 11:119026985:A:T | W246R | 0.998 |
| 11:119027822:G:C | S144R | 0.998 |
| 11:119027822:G:T | S144R | 0.998 |
| 11:119027824:T:G | S144R | 0.998 |
| 11:119027872:A:G | W128R | 0.998 |
| 11:119027872:A:T | W128R | 0.998 |
| 11:119028243:C:T | G111D | 0.998 |
| 11:119028386:G:C | S63R | 0.998 |
| 11:119028386:G:T | S63R | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000346411 (11:119031135 A>G), RS1000752335 (11:119027345 C>A,T), RS1000813730 (11:119027502 C>A,T), RS1000893817 (11:119024149 A>C,G), RS1000904054 (11:119030997 C>A), RS1000934875 (11:119031317 A>G), RS1001128485 (11:119024503 A>C), RS1001275176 (11:119027950 A>C,T), RS1001301633 (11:119025969 TG>T), RS1001358569 (11:119029724 T>C), RS1001455492 (11:119032575 C>T), RS1001885292 (11:119032832 G>A), RS1002063026 (11:119030324 C>A,T), RS1002277452 (11:119026849 G>C,T), RS1002489604 (11:119031531 T>C)
Disease associations
OMIM: gene MIM:602671 | disease phenotypes: MIM:232220, MIM:232240, MIM:619525, MIM:232200, MIM:300755, MIM:613148, MIM:615607, MIM:615615, MIM:615617
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| glycogen storage disease Ib | Definitive | Autosomal recessive |
| congenital disorder of glycosylation, type IIw | Definitive | Autosomal dominant |
| glycogen storage disease type 1 due to SLC37A4 mutation | Definitive | Autosomal recessive |
Mondo (14): glycogen storage disease Ib (MONDO:0009288), congenital disorder of glycosylation, type IIw (MONDO:0030437), congenital disorder of glycosylation (MONDO:0015286), glycogen storage disease I (MONDO:0002413), glycogen storage disease due to glucose-6-phosphatase deficiency type IA (MONDO:0009287), disorder of glycogen metabolism (MONDO:0002412), glycogen storage disease type 1 due to SLC37A4 mutation (MONDO:0023258), neutropenia (MONDO:0001475), leukopenia (MONDO:0003785), immunodeficiency disease (MONDO:0021094), inflammatory bowel disease 28 (MONDO:0013153), combined immunodeficiency due to CD3gamma deficiency (MONDO:0014276), immunodeficiency 18 (MONDO:0014278), immunodeficiency 19 (MONDO:0014280)
Orphanet (7): Glycogen storage disease due to glucose-6-phosphatase deficiency (Orphanet:364), Glycogen storage disease due to glucose-6-phosphatase deficiency type Ib (Orphanet:79259), Congenital disorder of glycosylation (Orphanet:137), Glycogen storage disease due to glucose-6-phosphatase deficiency type Ia (Orphanet:79258), Glycogen storage disease (Orphanet:79201), Combined immunodeficiency due to CD3gamma deficiency (Orphanet:169082), Immune dysregulation-inflammatory bowel disease-arthritis-recurrent infections syndrome (Orphanet:238569)
HPO phenotypes
145 total (30 of 145 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000023 | Inguinal hernia |
| HP:0000083 | Renal insufficiency |
| HP:0000093 | Proteinuria |
| HP:0000097 | Focal segmental glomerulosclerosis |
| HP:0000105 | Enlarged kidney |
| HP:0000121 | Nephrocalcinosis |
| HP:0000132 | Menorrhagia |
| HP:0000147 | Polycystic ovaries |
| HP:0000155 | Oral ulcer |
| HP:0000230 | Gingivitis |
| HP:0000275 | Narrow face |
| HP:0000293 | Full cheeks |
| HP:0000295 | Doll-like facies |
| HP:0000307 | Pointed chin |
| HP:0000311 | Round face |
| HP:0000316 | Hypertelorism |
| HP:0000324 | Facial asymmetry |
| HP:0000347 | Micrognathia |
| HP:0000369 | Low-set ears |
| HP:0000403 | Recurrent otitis media |
| HP:0000421 | Epistaxis |
| HP:0000430 | Underdeveloped nasal alae |
| HP:0000445 | Wide nose |
| HP:0000486 | Strabismus |
| HP:0000660 | Lipemia retinalis |
| HP:0000670 | Carious teeth |
| HP:0000696 | Delayed eruption of permanent teeth |
| HP:0000704 | Periodontitis |
GWAS associations
0 associations (top):
MeSH disease descriptors (9)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D018981 | Congenital Disorders of Glycosylation | C16.320.565.202.125; C18.452.648.202.125 |
| D006008 | Glycogen Storage Disease | C16.320.565.202.449; C18.452.648.202.449 |
| D005953 | Glycogen Storage Disease Type I | C16.320.565.202.449.448; C18.452.648.202.449.448 |
| D007970 | Leukopenia | C15.378.243.750; C15.378.553.546 |
| D009503 | Neutropenia | C15.378.243.750.184.564; C15.378.553.546.184.564 |
| C536831 | Glucose-6-phosphate translocase deficiency (supp.) | |
| C562594 | Glycogen Storage Disease IB (supp.) | |
| C538655 | Hepatorenal form of glycogen storage disease (supp.) | |
| C567728 | Inflammatory Bowel Disease 28, Autosomal Recessive (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL3217398 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: transporter — SLC37 family of phosphosugar/phosphate exchangers
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| S-4048 | Inhibition | 8.7 | pIC50 |
ChEMBL bioactivities
14 potent at pChembl≥5 of 21 total, top 14 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.70 | IC50 | 2 | nM | CHEMBL236247 |
| 8.52 | IC50 | 3 | nM | CHEMBL236247 |
| 8.30 | IC50 | 5 | nM | MUMBAISTATIN |
| 7.10 | IC50 | 80 | nM | CHEMBL3218305 |
| 6.89 | IC50 | 130 | nM | CHEMBL3218306 |
| 6.68 | IC50 | 210 | nM | CHEMBL3218302 |
| 6.48 | IC50 | 330 | nM | CHEMBL3218303 |
| 6.29 | Kd | 514.8 | nM | CHEMBL5653589 |
| 6.29 | ED50 | 514.8 | nM | CHEMBL5653589 |
| 5.80 | IC50 | 1600 | nM | CHEMBL3218304 |
| 5.60 | IC50 | 2500 | nM | CHEMBL32476 |
| 5.60 | IC50 | 2500 | nM | CHEMBL237508 |
| 5.60 | IC50 | 2500 | nM | CHEMBL237297 |
| 5.30 | IC50 | 5000 | nM | CHEMBL391290 |
PubChem BioAssay actives
6 with measured affinity, of 16 total; 6 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (1S,3R,4R,5R)-1-[[(1R,2S)-2-(4-chlorophenyl)cyclopropyl]methoxy]-3,4-dihydroxy-5-[(Z)-3-imidazo[4,5-b]pyridin-1-yl-3-phenylprop-2-enoyl]oxycyclohexane-1-carboxylic acid | 299949: Inhibition of glucose 6 phosphate translocase 1 | ic50 | 0.0030 | uM |
| 1-[2-(5-carboxy-4-hydroxypentanoyl)-6-hydroxybenzoyl]-3,8-dihydroxy-9,10-dioxoanthracene-2-carboxylic acid | 299949: Inhibition of glucose 6 phosphate translocase 1 | ic50 | 0.0050 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149421: Binding affinity to human SLC37A4 incubated for 45 mins by Kinobead based pull down assay | kd | 0.5148 | uM |
| 8-hydroxy-3-methoxy-1-[(E)-2-naphthalen-1-ylethenyl]-9,10-dioxoanthracene-2-carboxylic acid | 299949: Inhibition of glucose 6 phosphate translocase 1 | ic50 | 2.5000 | uM |
| 8-hydroxy-3-methoxy-9,10-dioxo-1-[(E)-2-phenylethenyl]anthracene-2-carboxylic acid | 299949: Inhibition of glucose 6 phosphate translocase 1 | ic50 | 2.5000 | uM |
| 5,11-dihydroxy-2-naphthalen-1-yl-1,2-dihydronaphtho[3,2-f]isochromene-4,7,12-trione | 299949: Inhibition of glucose 6 phosphate translocase 1 | ic50 | 5.0000 | uM |
CTD chemical–gene interactions
62 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation, decreases expression | 3 |
| sodium arsenite | decreases expression, increases abundance | 2 |
| Air Pollutants | affects cotreatment, affects expression, increases abundance, decreases expression | 2 |
| Estradiol | affects cotreatment, increases expression, decreases expression | 2 |
| Smoke | decreases expression, decreases reaction | 2 |
| Tobacco Smoke Pollution | decreases expression | 2 |
| Valproic Acid | decreases expression, increases expression | 2 |
| Cyclosporine | decreases expression | 2 |
| Aflatoxin B1 | affects expression, decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| GSK-J4 | decreases expression | 1 |
| bufotalin | decreases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| methyleugenol | decreases expression | 1 |
| alpha-pinene | affects cotreatment, affects expression, increases abundance | 1 |
| bisphenol A | affects expression | 1 |
| arsenite | increases methylation | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| manganese chloride | increases abundance, increases expression | 1 |
| 2,3-bis(3’-hydroxybenzyl)butyrolactone | affects cotreatment, increases expression | 1 |
| benazol P | affects expression | 1 |
| methacrylaldehyde | affects cotreatment, affects expression, increases abundance | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| perfluoro-n-nonanoic acid | decreases expression | 1 |
| K 7174 | decreases expression | 1 |
| erucylphospho-N,N,N-trimethylpropylammonium | decreases expression | 1 |
| abrine | decreases expression | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
ChEMBL screening assays
5 unique, capped per target: 5 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3224852 | Binding | Inhibition of G6PT1 (unknown origin) | Natural product inhibitors of glucose-6-phosphate translocase — Medchemcomm |
Cellosaurus cell lines
19 cell lines: 14 induced pluripotent stem cell, 5 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_C870 | GSD1-hiPSC1 | Induced pluripotent stem cell | Male |
| CVCL_C871 | GSD1-hiPSC2 | Induced pluripotent stem cell | Male |
| CVCL_C872 | GSD1-hiPSC3 | Induced pluripotent stem cell | Male |
| CVCL_C873 | GSD1-hiPSC5 | Induced pluripotent stem cell | Male |
| CVCL_C874 | GSD1-hiPSC6 | Induced pluripotent stem cell | Male |
| CVCL_C875 | GSD1-hiPSC7 | Induced pluripotent stem cell | Male |
| CVCL_D4TC | HuH7-SLC37A4-KO-c5 | Cancer cell line | Male |
| CVCL_D4TD | HuH7-SLC37A4-KO-c6 | Cancer cell line | Male |
| CVCL_E1DC | Ubigene THP-1 SLC37A4 KO | Cancer cell line | Male |
| CVCL_E5YZ | GSDIb-iPSCs F#1 | Induced pluripotent stem cell | Male |
Clinical trials (associated diseases)
281 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00030758 | PHASE4 | UNKNOWN | Filgrastim or Pegfilgrastim in Preventing Neutropenia in Women Receiving Chemotherapy Following Surgery for Breast Cancer |
| NCT00125723 | PHASE4 | COMPLETED | FIRST - Study of Pegfilgrastim Administered in the First and Subsequent Cycles of Myelosuppressive Chemotherapy |
| NCT00194857 | PHASE4 | TERMINATED | Treatment of Anemia and Neutropenia in HIV/HCV Coinfected Patients Treated With Pegylated Interferon and Ribavirin |
| NCT00257790 | PHASE4 | COMPLETED | The Tobramycin Study |
| NCT00277160 | PHASE4 | COMPLETED | A Study of Primary Prophylaxis With Neulasta (Pegfilgrastim) Versus Secondary Prophylaxis After Chemotherapy in Elderly Subjects (>/= 65 Years Old) With Cancer |
| NCT00686543 | PHASE4 | COMPLETED | Oral Posaconazole in High Risk Patients With Gastrointestinal Dysfunction (Study P05115) |
| NCT01086878 | PHASE4 | COMPLETED | Safety of Cotrimoxazole in HIV- and HAART-exposed Infants |
| NCT01114165 | PHASE4 | COMPLETED | Value of the LightCycler® SeptiFast Test MGRADE for the Pathogen Detection in Neutropenic Hematological Patients |
| NCT01135589 | PHASE4 | UNKNOWN | Micafungin Prevention Study for Fungal Disease in Child Receiving Allogenic Hematopoietic Stem Cell Transplantation |
| NCT01571518 | PHASE4 | UNKNOWN | Prevention of Neutropenia After Using G-CSF With TAC Chemotherapy |
| NCT02621905 | PHASE4 | COMPLETED | Steady-State Comparative Bioavailability Study in Prophylaxis Patients of Lozanoc® 50 mg With Sporanox® 100 mg |
| NCT02967341 | PHASE4 | UNKNOWN | Blood Draw Validation for Ciprofloxacin Pharmacokinetic Research in Pediatric Cancer Patients |
| NCT04009941 | PHASE4 | COMPLETED | Efficacy and Safety of 4.5mg PEG-rhG-CSF Per Cycle in Preventing Neutropenia After Intensive Chemotherapy for Breast Cancer |
| NCT04904614 | PHASE4 | COMPLETED | Letermovir Use in Heart Transplant Recipients |
| NCT05626530 | PHASE4 | RECRUITING | Letermovir for Secondary Prophylaxis in Solid Organ Transplant Recipients |
| NCT06145321 | PHASE4 | ACTIVE_NOT_RECRUITING | Continuous Versus Bolus Administration of G-CSF in Children With Cancer |
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Related Atlas pages
- Associated diseases: glycogen storage disease Ib, congenital disorder of glycosylation, type IIw, glycogen storage disease type 1 due to SLC37A4 mutation
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): combined immunodeficiency due to CD3gamma deficiency, congenital disorder of glycosylation, congenital disorder of glycosylation, type IIw, disorder of glycogen metabolism, glycogen storage disease due to glucose-6-phosphatase deficiency type IA, glycogen storage disease I, glycogen storage disease Ib, glycogen storage disease type 1 due to SLC37A4 mutation, immunodeficiency 18, immunodeficiency 19, immunodeficiency disease, inflammatory bowel disease 28, leukopenia, neutropenia