SLC39A12-AS1

Summary

SLC39A12-AS1 (SLC39A12 antisense RNA 1, HGNC:44881) is a long non-coding RNA gene on chromosome 10p12.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44881
Approved symbol	SLC39A12-AS1
Name	SLC39A12 antisense RNA 1
Location	10p12.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226083
Ensembl biotype	lncRNA
Entrez	100129213
RNAcentral	URS0000571E4C — lncRNA, 1966 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000439319, ENST00000445287

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000439319 — 5 exons

Exon	Start	End
ENSE00001597282	18001786	18003396
ENSE00001642343	18008550	18008683
ENSE00001742639	18010529	18010562
ENSE00001771622	18009665	18009753
ENSE00001806147	18004311	18004408

Expression profiles

Bgee: expression breadth broad, 80 present calls, max score 87.50.

Top tissues by expression

80 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.50	gold quality
cortical plate	UBERON:0005343	62.84	gold quality
ganglionic eminence	UBERON:0004023	62.34	gold quality
kidney	UBERON:0002113	61.27	silver quality
ventricular zone	UBERON:0003053	58.64	silver quality
liver	UBERON:0002107	57.51	silver quality
prefrontal cortex	UBERON:0000451	54.72	gold quality
corpus callosum	UBERON:0002336	54.17	gold quality
endometrium	UBERON:0001295	53.97	silver quality
blood	UBERON:0000178	53.43	gold quality
saliva-secreting gland	UBERON:0001044	50.56	gold quality
islet of Langerhans	UBERON:0000006	50.15	silver quality
lymph node	UBERON:0000029	50.03	silver quality
frontal cortex	UBERON:0001870	49.92	gold quality
superior frontal gyrus	UBERON:0002661	49.11	gold quality
muscle of leg	UBERON:0001383	48.24	silver quality
monocyte	CL:0000576	48.20	silver quality
myometrium	UBERON:0001296	48.12	silver quality
nucleus accumbens	UBERON:0001882	47.72	gold quality
heart left ventricle	UBERON:0002084	47.64	gold quality
cerebral cortex	UBERON:0000956	47.52	gold quality
heart	UBERON:0000948	47.48	gold quality
adrenal gland	UBERON:0002369	47.34	gold quality
amygdala	UBERON:0001876	47.28	gold quality
primary visual cortex	UBERON:0002436	47.09	silver quality
putamen	UBERON:0001874	46.90	gold quality
Brodmann (1909) area 9	UBERON:0013540	46.89	gold quality
brain	UBERON:0000955	46.63	gold quality
placenta	UBERON:0001987	46.51	silver quality
anterior cingulate cortex	UBERON:0009835	46.25	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.26

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.