SLC45A4-AS1

Summary

SLC45A4-AS1 (SLC45A4 antisense RNA 1, HGNC:56711) is a long non-coding RNA gene on chromosome 8q24.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56711
Approved symbol	SLC45A4-AS1
Name	SLC45A4 antisense RNA 1
Location	8q24.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254019
Ensembl biotype	lncRNA
Entrez	105375787
RNAcentral	URS0000E60A84 — lncRNA, 582 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000518520

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000518520 — 2 exons

Exon	Start	End
ENSE00002103945	141254565	141254771
ENSE00002104597	141256441	141256817

Expression profiles

Bgee: expression breadth ubiquitous, 104 present calls, max score 73.87.

Top tissues by expression

104 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	73.87	gold quality
sural nerve	UBERON:0015488	71.36	gold quality
bone marrow cell	CL:0002092	71.03	silver quality
blood	UBERON:0000178	63.70	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	62.91	gold quality
bone marrow	UBERON:0002371	62.03	gold quality
calcaneal tendon	UBERON:0003701	57.37	gold quality
tonsil	UBERON:0002372	56.62	silver quality
monocyte	CL:0000576	55.09	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.74	gold quality
leukocyte	CL:0000738	54.29	gold quality
placenta	UBERON:0001987	53.91	gold quality
primary visual cortex	UBERON:0002436	53.64	gold quality
urinary bladder	UBERON:0001255	53.15	gold quality
tibial artery	UBERON:0007610	51.24	gold quality
popliteal artery	UBERON:0002250	51.14	gold quality
cortex of kidney	UBERON:0001225	51.07	gold quality
hindlimb stylopod muscle	UBERON:0004252	50.35	gold quality
gall bladder	UBERON:0002110	50.15	gold quality
prefrontal cortex	UBERON:0000451	49.53	gold quality
islet of Langerhans	UBERON:0000006	49.42	gold quality
kidney	UBERON:0002113	49.36	gold quality
ectocervix	UBERON:0012249	49.31	gold quality
adenohypophysis	UBERON:0002196	48.88	gold quality
multicellular organism	UBERON:0000468	48.10	gold quality
descending thoracic aorta	UBERON:0002345	47.71	gold quality
endometrium	UBERON:0001295	46.80	gold quality
small intestine	UBERON:0002108	46.57	silver quality
superior frontal gyrus	UBERON:0002661	46.07	gold quality
adult mammalian kidney	UBERON:0000082	46.05	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.