SLC4A8-AS1

Summary

SLC4A8-AS1 (SLC4A8 antisense RNA 1, HGNC:55259) is a long non-coding RNA gene on chromosome 12q13.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55259
Approved symbol	SLC4A8-AS1
Name	SLC4A8 antisense RNA 1
Location	12q13.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000271065
Ensembl biotype	lncRNA
Entrez	107984508
RNAcentral	URS0002A6FD99 — lncRNA, 759 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000604939, ENST00000821885, ENST00000821886

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000604939 — 2 exons

Exon	Start	End
ENSE00004229114	51421893	51422177
ENSE00004229118	51424487	51424735

Expression profiles

Bgee: expression breadth broad, 99 present calls, max score 95.02.

Top tissues by expression

101 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow	UBERON:0002371	95.02	gold quality
thymus	UBERON:0002370	94.29	gold quality
quadriceps femoris	UBERON:0001377	91.78	gold quality
cerebellar vermis	UBERON:0004720	88.92	gold quality
left testis	UBERON:0004533	88.61	gold quality
testis	UBERON:0000473	87.79	gold quality
right testis	UBERON:0004534	86.55	gold quality
corpus callosum	UBERON:0002336	79.82	gold quality
skeletal muscle tissue	UBERON:0001134	67.62	gold quality
vermiform appendix	UBERON:0001154	64.48	gold quality
leukocyte	CL:0000738	63.64	gold quality
monocyte	CL:0000576	63.22	gold quality
lymph node	UBERON:0000029	62.79	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	61.89	gold quality
prefrontal cortex	UBERON:0000451	58.92	gold quality
muscle of leg	UBERON:0001383	58.35	gold quality
islet of Langerhans	UBERON:0000006	58.17	gold quality
gastrocnemius	UBERON:0001388	58.16	gold quality
blood	UBERON:0000178	57.12	gold quality
superior frontal gyrus	UBERON:0002661	56.21	gold quality
urinary bladder	UBERON:0001255	55.98	gold quality
multicellular organism	UBERON:0000468	55.91	gold quality
primary visual cortex	UBERON:0002436	55.84	gold quality
tonsil	UBERON:0002372	55.26	gold quality
calcaneal tendon	UBERON:0003701	54.54	gold quality
substantia nigra	UBERON:0002038	54.05	gold quality
right adrenal gland cortex	UBERON:0035827	53.69	gold quality
heart	UBERON:0000948	53.11	gold quality
pancreas	UBERON:0001264	53.09	gold quality
heart left ventricle	UBERON:0002084	52.93	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.