SLC5A11
geneOn this page
Also known as KST1SMIT2SGLT6
Summary
SLC5A11 (solute carrier family 5 member 11, HGNC:23091) is a protein-coding gene on chromosome 16p12.1, encoding Sodium/myo-inositol cotransporter 2 (Q8WWX8). Involved in the sodium-dependent cotransport of myo-inositol (MI) with a Na(+):MI stoichiometry of 2:1.
Cotransporters, such as SLC5A11, represent a major class of proteins that make use of ion gradients to drive active transport for the cellular accumulation of nutrients, neurotransmitters, osmolytes, and ions Roll et al. (2002) [PubMed 12039040].
Source: NCBI Gene 115584 — RefSeq curated summary.
At a glance
- GWAS associations: 6
- Clinical variants (ClinVar): 95 total
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_001352248
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:23091 |
| Approved symbol | SLC5A11 |
| Name | solute carrier family 5 member 11 |
| Location | 16p12.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | KST1, SMIT2, SGLT6 |
| Ensembl gene | ENSG00000158865 |
| Ensembl biotype | protein_coding |
| OMIM | 610238 |
| Entrez | 115584 |
Gene structure
Transcript identifiers
Ensembl transcripts: 14 — 10 protein_coding, 2 nonsense_mediated_decay, 2 retained_intron
ENST00000347898, ENST00000424767, ENST00000488922, ENST00000545376, ENST00000564125, ENST00000565586, ENST00000565769, ENST00000567758, ENST00000568579, ENST00000569071, ENST00000569520, ENST00000899689, ENST00000899690, ENST00000960822
RefSeq mRNA: 21 — MANE Select: NM_001352248
NM_001258411, NM_001258412, NM_001258413, NM_001258414, NM_001352235, NM_001352236, NM_001352237, NM_001352238, NM_001352242, NM_001352245, NM_001352246, NM_001352247, NM_001352248, NM_001352249, NM_001352250, NM_001352259, NM_001394076, NM_001394077, NM_001394078, NM_001394079, NM_001394080
CCDS: CCDS10625, CCDS58437, CCDS58438, CCDS58439, CCDS58440
Canonical transcript exons
ENST00000424767 — 17 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001350758 | 24846232 | 24846438 |
| ENSE00002677296 | 24858620 | 24858778 |
| ENSE00003467842 | 24884051 | 24884131 |
| ENSE00003472245 | 24907025 | 24907175 |
| ENSE00003485012 | 24906657 | 24906764 |
| ENSE00003489375 | 24908881 | 24909096 |
| ENSE00003538918 | 24875627 | 24875731 |
| ENSE00003553874 | 24872160 | 24872219 |
| ENSE00003559653 | 24862601 | 24862672 |
| ENSE00003621329 | 24869901 | 24870005 |
| ENSE00003626069 | 24907963 | 24908131 |
| ENSE00003671985 | 24897974 | 24898109 |
| ENSE00003681736 | 24910306 | 24910477 |
| ENSE00003687009 | 24890869 | 24891074 |
| ENSE00003694405 | 24877258 | 24877363 |
| ENSE00003924311 | 24845963 | 24846012 |
| ENSE00003938135 | 24911328 | 24911626 |
Expression profiles
Bgee: expression breadth ubiquitous, 125 present calls, max score 97.31.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 1.4184 / max 379.9191, expressed in 81 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 153258 | 0.7658 | 69 |
| 153257 | 0.5121 | 68 |
| 153259 | 0.0828 | 44 |
| 153260 | 0.0577 | 25 |
Top tissues by expression
131 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| C1 segment of cervical spinal cord | UBERON:0006469 | 97.31 | gold quality |
| corpus callosum | UBERON:0002336 | 95.60 | gold quality |
| substantia nigra | UBERON:0002038 | 93.89 | gold quality |
| primary visual cortex | UBERON:0002436 | 89.64 | gold quality |
| Ammon’s horn | UBERON:0001954 | 88.20 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 85.64 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 83.42 | gold quality |
| hypothalamus | UBERON:0001898 | 82.19 | gold quality |
| putamen | UBERON:0001874 | 80.34 | gold quality |
| temporal lobe | UBERON:0001871 | 79.39 | gold quality |
| amygdala | UBERON:0001876 | 79.23 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 79.14 | gold quality |
| cerebral cortex | UBERON:0000956 | 78.66 | gold quality |
| frontal cortex | UBERON:0001870 | 78.53 | gold quality |
| duodenum | UBERON:0002114 | 78.49 | gold quality |
| prefrontal cortex | UBERON:0000451 | 78.42 | gold quality |
| right frontal lobe | UBERON:0002810 | 78.05 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 77.70 | gold quality |
| brain | UBERON:0000955 | 74.72 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 74.42 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 73.31 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 73.25 | gold quality |
| small intestine | UBERON:0002108 | 72.95 | gold quality |
| caudate nucleus | UBERON:0001873 | 71.30 | gold quality |
| cerebellum | UBERON:0002037 | 70.87 | gold quality |
| cerebellar cortex | UBERON:0002129 | 70.76 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 70.69 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 69.31 | gold quality |
| nucleus accumbens | UBERON:0001882 | 69.00 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 65.32 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-35 | yes | 1153.66 |
| E-HCAD-25 | yes | 71.01 |
| E-ANND-3 | yes | 3.73 |
Regulation
Is transcription factor: no
Literature-anchored findings (GeneRIF, showing 1)
- SLC5A11 is involved with some immune effects and interacts with immune-related gene(s); it is consistent with its function as an autoimmune modifier gene. (PMID:18069935)
Cross-species orthologs
13 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | slc5a11 | ENSDARG00000019932 |
| mus_musculus | Slc5a11 | ENSMUSG00000030769 |
| rattus_norvegicus | Slc5a11 | ENSRNOG00000013407 |
| drosophila_melanogaster | CG2187 | FBGN0017448 |
| drosophila_melanogaster | rumpel | FBGN0029950 |
| drosophila_melanogaster | SLC5A11 | FBGN0031998 |
| drosophila_melanogaster | bumpel | FBGN0037895 |
| drosophila_melanogaster | salt | FBGN0039872 |
| drosophila_melanogaster | Smvt | FBGN0039873 |
| drosophila_melanogaster | CG31262 | FBGN0051262 |
| drosophila_melanogaster | CG31668 | FBGN0051668 |
| drosophila_melanogaster | CG33124 | FBGN0053124 |
| drosophila_melanogaster | kumpel | FBGN0250757 |
Paralogs (12): SLC5A1 (ENSG00000100170), SLC5A4 (ENSG00000100191), SLC5A5 (ENSG00000105641), SLC5A7 (ENSG00000115665), SLC5A9 (ENSG00000117834), SLC5A6 (ENSG00000138074), SLC5A2 (ENSG00000140675), SLC5A12 (ENSG00000148942), SLC5A10 (ENSG00000154025), SLC5A3 (ENSG00000198743), SLC5A8 (ENSG00000256870), (ENSG00000293606)
Protein
Protein identifiers
Sodium/myo-inositol cotransporter 2 — Q8WWX8 (reviewed: Q8WWX8)
Alternative names: Sodium-dependent glucose cotransporter, Sodium/glucose cotransporter KST1, Sodium/myo-inositol transporter 2, Solute carrier family 5 member 11
All UniProt accessions (4): Q8WWX8, A0A8J9ASH1, H3BN85, I3L1G0
UniProt curated annotations — full annotation on UniProt →
Function. Involved in the sodium-dependent cotransport of myo-inositol (MI) with a Na(+):MI stoichiometry of 2:1. Exclusively responsible for apical MI transport and absorption in intestine. Can also transport D-chiro-inositol (DCI) but not L-fucose. Exhibits stereospecific cotransport of both D-glucose and D-xylose. May induce apoptosis through the TNF, PDCD1 pathway. May play a role in the regulation of MI concentration in serum, involving reabsorption in at least the proximal tubule of the kidney.
Subcellular location. Membrane. Apical cell membrane.
Tissue specificity. Highest expression in heart, skeletal muscle, kidney, liver and placenta. Weaker expression in brain, colon, spleen, lung and peripheral blood leukocytes.
Activity regulation. MI transport activity inhibited by D-chiro-inositol (DCI), phlorizin (Pz) and sodium (Na(+)). Insulin increases D-chiro-inositol uptake.
Miscellaneous. Acts as an autoimmune modifier in systemic lupus erythematosus (SLE) as it is significantly associated with low complement component 4 (C4), anti-Smith antibody, serositis, and alopecia.
Similarity. Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
Isoforms (6)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q8WWX8-1 | 1 | yes |
| Q8WWX8-2 | 2 | |
| Q8WWX8-3 | 3 | |
| Q8WWX8-4 | 4 | |
| Q8WWX8-5 | 5 | |
| Q8WWX8-6 | 6 |
RefSeq proteins (21): NP_001245340, NP_001245341, NP_001245342, NP_001245343, NP_001339164, NP_001339165, NP_001339166, NP_001339167, NP_001339171, NP_001339174, NP_001339175, NP_001339176, NP_001339177, NP_001339178, NP_001339179, NP_001339188, NP_001381005, NP_001381006, NP_001381007, NP_001381008, NP_001381009 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001734 | Na/solute_symporter | Family |
| IPR038377 | Na/Glc_symporter_sf | Homologous_superfamily |
Pfam: PF00474
Catalyzed reactions (Rhea), 4 shown:
- D-glucose(out) + 2 Na(+)(out) = D-glucose(in) + 2 Na(+)(in) (RHEA:70495)
- myo-inositol(out) + 2 Na(+)(out) = myo-inositol(in) + 2 Na(+)(in) (RHEA:72987)
- 1D-chiro-inositol(out) + 2 Na(+)(out) = 1D-chiro-inositol(in) + 2 Na(+)(in) (RHEA:73315)
- D-xylose(out) + 2 Na(+)(out) = D-xylose(in) + 2 Na(+)(in) (RHEA:73367)
UniProt features (44 total): topological domain 14, transmembrane region 14, splice variant 6, sequence variant 6, sequence conflict 3, chain 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8WWX8-F1 | 82.19 | 0.48 |
Function
Pathways and Gene Ontology
Reactome pathways
4 pathways
| ID | Pathway |
|---|---|
| R-HSA-429593 | Inositol transporters |
| R-HSA-382551 | Transport of small molecules |
| R-HSA-425366 | |
| R-HSA-425407 | SLC-mediated transmembrane transport |
MSigDB gene sets: 63 (showing top):
GOBP_MONOATOMIC_CATION_TRANSPORT, GOBP_ORGANIC_HYDROXY_COMPOUND_TRANSPORT, GOBP_POLYOL_TRANSMEMBRANE_TRANSPORT, BALLIF_DEVELOPMENTAL_DISABILITY_P16_P12_DELETION, SANSOM_APC_TARGETS_DN, GOCC_APICAL_PLASMA_MEMBRANE, TGTTTAC_MIR30A5P_MIR30C_MIR30D_MIR30B_MIR30E5P, GOBP_TRANSMEMBRANE_TRANSPORT, GOBP_SODIUM_ION_TRANSPORT, GOCC_APICAL_PART_OF_CELL, chr16p12, GOCC_PLASMA_MEMBRANE_REGION, GOMF_ACTIVE_TRANSMEMBRANE_TRANSPORTER_ACTIVITY, GOMF_SECONDARY_ACTIVE_TRANSMEMBRANE_TRANSPORTER_ACTIVITY, GOMF_POLYOL_TRANSMEMBRANE_TRANSPORTER_ACTIVITY
GO Biological Process (9): apoptotic process (GO:0006915), myo-inositol transport (GO:0015798), monoatomic ion transport (GO:0006811), sodium ion transport (GO:0006814), hexose transmembrane transport (GO:0008645), polyol transmembrane transport (GO:0015791), carbohydrate transmembrane transport (GO:0034219), sodium ion transmembrane transport (GO:0035725), transmembrane transport (GO:0055085)
GO Molecular Function (6): myo-inositol transmembrane transporter activity (GO:0005365), D-glucose:sodium symporter activity (GO:0005412), polyol transmembrane transporter activity (GO:0015166), protein binding (GO:0005515), symporter activity (GO:0015293), transmembrane transporter activity (GO:0022857)
GO Cellular Component (3): plasma membrane (GO:0005886), apical plasma membrane (GO:0016324), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| SLC-mediated transmembrane transport | 1 |
| Transport of small molecules | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| transmembrane transport | 3 |
| organic hydroxy compound transport | 2 |
| transport | 2 |
| programmed cell death | 1 |
| apoptotic signaling pathway | 1 |
| execution phase of apoptosis | 1 |
| metal ion transport | 1 |
| monosaccharide transmembrane transport | 1 |
| carbohydrate transport | 1 |
| sodium ion transport | 1 |
| monoatomic cation transmembrane transport | 1 |
| cellular process | 1 |
| polyol transmembrane transporter activity | 1 |
| myo-inositol transport | 1 |
| carbohydrate:monoatomic cation symporter activity | 1 |
| solute:sodium symporter activity | 1 |
| D-glucose transmembrane transporter activity | 1 |
| polyol transmembrane transport | 1 |
| transmembrane transporter activity | 1 |
| binding | 1 |
| secondary active transmembrane transporter activity | 1 |
| transporter activity | 1 |
| membrane | 1 |
| cell periphery | 1 |
| apical part of cell | 1 |
| plasma membrane region | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
1047 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| SLC5A11 | SLC2A2 | P11168 | 628 |
| SLC5A11 | SLC2A13 | Q96QE2 | 593 |
| SLC5A11 | SLC2A5 | P22732 | 556 |
| SLC5A11 | SLC2A12 | Q8TD20 | 480 |
| SLC5A11 | SLC2A1 | P11166 | 473 |
| SLC5A11 | SLC13A4 | Q9UKG4 | 433 |
| SLC5A11 | SLC2A8 | Q9NY64 | 427 |
| SLC5A11 | H7C1H1 | H7C1H1 | 408 |
| SLC5A11 | MGAM | O43451 | 399 |
| SLC5A11 | SI | P14410 | 392 |
| SLC5A11 | SLC2A3 | P11169 | 385 |
| SLC5A11 | SLC2A11 | Q9BYW1 | 385 |
| SLC5A11 | SLC2A4 | P14672 | 379 |
| SLC5A11 | SLC15A1 | P46059 | 379 |
| SLC5A11 | GCG | P01275 | 375 |
IntAct
8 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| KPNA3 | SLC5A11 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SLC5A11 | KPNA3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SLC5A11 | SPTAN1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| SLC5A11 | LINGO1 | psi-mi:“MI:0914”(association) | 0.350 |
| KLHL22 | TRAV18 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC5A12 | PLPP3 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (10): SLC5A11 (Two-hybrid), KPNA3 (Two-hybrid), LINGO1 (Affinity Capture-MS), SLC5A11 (Proximity Label-MS), SLC5A11 (Affinity Capture-MS), LINGO1 (Affinity Capture-MS), CBLN4 (Affinity Capture-MS), SLC5A11 (Positive Genetic), SLC5A11 (Affinity Capture-MS), SLC5A11 (Affinity Capture-MS)
ESM2 similar proteins: A0PJK1, A8I1B9, A8WHP3, B9NAE4, D3ZIS0, O02228, O77741, P11170, P13866, P26429, P26430, P31636, P31637, P31639, P41251, P49279, P49280, P53790, P53791, P53792, P53793, P53794, P56436, P70553, P83740, Q27946, Q27981, Q28610, Q28728, Q2M3M2, Q3ZC26, Q5FY69, Q5SWY8, Q6R4Q5, Q7T384, Q8BGY9, Q8C3K6, Q8K0E3, Q8UWF0, Q8VDT1
Diamond homologs: A0PJK1, A8I1B9, A8WHP3, D3ZIS0, P11170, P13866, P26429, P26430, P31636, P31637, P31639, P53790, P53791, P53792, P53793, P53794, P96169, Q28610, Q28728, Q2M3M2, Q3ZC26, Q5FY69, Q5SWY8, Q6R4Q5, Q8C3K6, Q8K0E3, Q8VDT1, Q8WWX8, Q91ZP4, Q923I7, Q9ET37, Q9JKZ2, Q9NY91, Q9Z1F2, P31448
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
95 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 81 |
| Likely benign | 4 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2701 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 16:24861971:T:A | acceptor_gain | 1.0000 |
| 16:24862599:A:AG | acceptor_gain | 1.0000 |
| 16:24862600:G:GA | acceptor_gain | 1.0000 |
| 16:24862668:GGCCA:G | donor_gain | 1.0000 |
| 16:24862669:GCCAG:G | donor_gain | 1.0000 |
| 16:24862673:G:GG | donor_gain | 1.0000 |
| 16:24869895:CCACA:C | acceptor_loss | 1.0000 |
| 16:24869896:CACA:C | acceptor_loss | 1.0000 |
| 16:24869897:ACAGG:A | acceptor_loss | 1.0000 |
| 16:24869898:CA:C | acceptor_loss | 1.0000 |
| 16:24869899:A:C | acceptor_loss | 1.0000 |
| 16:24869900:G:C | acceptor_loss | 1.0000 |
| 16:24870006:G:GG | donor_gain | 1.0000 |
| 16:24875728:CTCGG:C | donor_loss | 1.0000 |
| 16:24875729:TCGG:T | donor_loss | 1.0000 |
| 16:24875732:G:GG | donor_gain | 1.0000 |
| 16:24875733:T:G | donor_loss | 1.0000 |
| 16:24884132:G:GG | donor_gain | 1.0000 |
| 16:24897970:CCAG:C | acceptor_loss | 1.0000 |
| 16:24897972:A:AG | acceptor_gain | 1.0000 |
| 16:24897972:A:T | acceptor_loss | 1.0000 |
| 16:24897972:AG:A | acceptor_gain | 1.0000 |
| 16:24897972:AGGT:A | acceptor_gain | 1.0000 |
| 16:24897973:G:GG | acceptor_gain | 1.0000 |
| 16:24897973:G:GT | acceptor_loss | 1.0000 |
| 16:24897973:GG:G | acceptor_gain | 1.0000 |
| 16:24897973:GGT:G | acceptor_gain | 1.0000 |
| 16:24897973:GGTG:G | acceptor_gain | 1.0000 |
| 16:24897973:GGTGA:G | acceptor_gain | 1.0000 |
| 16:24898106:CCAG:C | donor_loss | 1.0000 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000008443 (16:24862460 C>A), RS1000050412 (16:24886466 TTC>T), RS1000080609 (16:24901912 C>T), RS1000093050 (16:24891567 T>A), RS1000124796 (16:24903642 T>C), RS1000261917 (16:24880675 C>T), RS1000280890 (16:24883894 G>A), RS1000331901 (16:24895909 G>A), RS1000377250 (16:24896216 T>C), RS1000441963 (16:24889566 T>C), RS1000489267 (16:24904072 C>T), RS1000493646 (16:24845394 T>C), RS1000506004 (16:24857941 G>A), RS1000536957 (16:24857591 G>A), RS1000607202 (16:24851666 C>T)
Disease associations
OMIM: gene MIM:610238 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
6 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002479_14 | Lupus nephritis in systemic lupus erythematosus | 5.000000e-07 |
| GCST003119_20 | Urinary metabolites | 9.000000e-66 |
| GCST006979_653 | Heel bone mineral density | 6.000000e-10 |
| GCST007611_6 | Chronic obstructive pulmonary disease or high blood pressure (pleiotropy) | 1.000000e-08 |
| GCST009733_45 | Urinary metabolite levels in chronic kidney disease | 7.000000e-30 |
| GCST010703_260 | Brain morphology (MOSTest) | 2.000000e-13 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005116 | urinary metabolite measurement |
| EFO:0009270 | heel bone mineral density |
| EFO:0004346 | neuroimaging measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1744524 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 5,323 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL429910 | DAPAGLIFLOZIN | 4 | 5,323 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: transporter — Sodium myo-inositol cotransporter transporters
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| phlorizin | Inhibition | 4.1 | pKi |
ChEMBL bioactivities
2 potent at pChembl≥5 of 3 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.42 | IC50 | 380 | nM | DAPAGLIFLOZIN |
| 5.04 | IC50 | 9200 | nM | CHEMBL1762505 |
PubChem BioAssay actives
2 with measured affinity, of 4 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| Dapagliflozin | 589976: Inhibition of SGLT6 expressed in CHO cells assessed as inhibition of [14C]-alpha-methyl-D-glucopyranoside transport after 60 mins by scintillation counting | ic50 | 0.3800 | uM |
| 6,8-dichloro-4-[[5-[2-(4-chlorophenyl)ethyl]-4-(3,3,3-trifluoropropyl)-1,2,4-triazol-3-yl]methyl]-1,4-benzoxazin-3-one | 589976: Inhibition of SGLT6 expressed in CHO cells assessed as inhibition of [14C]-alpha-methyl-D-glucopyranoside transport after 60 mins by scintillation counting | ic50 | 9.2000 | uM |
CTD chemical–gene interactions
26 total (human), top 26 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation, increases expression | 4 |
| sodium arsenite | affects methylation, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| methyleugenol | increases expression | 1 |
| propionaldehyde | decreases expression | 1 |
| bisphenol A | decreases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression, affects cotreatment | 1 |
| pentanal | decreases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| abrine | decreases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Aldehydes | decreases expression | 1 |
| Lipopolysaccharides | affects response to substance, increases expression, affects cotreatment | 1 |
| N-Nitrosopyrrolidine | increases expression | 1 |
| Phenobarbital | increases expression | 1 |
| Rifampin | increases expression | 1 |
| Silicon Dioxide | decreases expression | 1 |
| Thiram | increases expression | 1 |
| Triclosan | increases expression | 1 |
| Urethane | decreases expression | 1 |
| 2,4-Dichlorophenoxyacetic Acid | decreases expression | 1 |
| Aflatoxin B1 | decreases expression | 1 |
| Okadaic Acid | increases expression | 1 |
| Copper Sulfate | increases expression | 1 |
ChEMBL screening assays
2 unique, capped per target: 1 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1763187 | Binding | Inhibition of SGLT6 expressed in CHO cells assessed as inhibition of [14C]-alpha-methyl-D-glucopyranoside transport after 60 mins by scintillation counting | Discovery of non-glucoside SGLT2 inhibitors. — Bioorg Med Chem Lett |
| CHEMBL5209619 | Functional | Substrate uptake by the Sodium/myo-inositol cotransporter 2 (SMIT2, SLC5A11) as assessed by the fluorescent FLIPR membrane potential dye in HEK-293 JumpIN-SLC5A11 cells (PubChem AID: 1794826) | Membrane potential based assay for SLC5A11 using HEK-293 SLC5A11 OE cells |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): lupus nephritis