SLC71A1-AS1

Summary

SLC71A1-AS1 (SLC71A1 antisense RNA 1, HGNC:58237) is a long non-coding RNA gene on chromosome 1p21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58237
Approved symbol	SLC71A1-AS1
Name	SLC71A1 antisense RNA 1
Location	1p21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000241073
Ensembl biotype	lncRNA
Entrez	139355225
RNAcentral	URS00000AA8A2 — lncRNA, 384 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000432294

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000432294 — 2 exons

Exon	Start	End
ENSE00001629603	100057990	100058081
ENSE00001671906	100084180	100084471

Expression profiles

Bgee: expression breadth ubiquitous, 111 present calls, max score 84.73.

Top tissues by expression

113 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	84.73	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.09	silver quality
ganglionic eminence	UBERON:0004023	77.34	gold quality
quadriceps femoris	UBERON:0001377	74.77	gold quality
cerebellar vermis	UBERON:0004720	74.01	gold quality
thymus	UBERON:0002370	71.29	gold quality
cortical plate	UBERON:0005343	69.65	gold quality
adrenal tissue	UBERON:0018303	64.75	gold quality
bone marrow	UBERON:0002371	64.51	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.37	gold quality
calcaneal tendon	UBERON:0003701	63.98	gold quality
lower esophagus mucosa	UBERON:0035834	63.56	gold quality
leukocyte	CL:0000738	63.50	gold quality
ventricular zone	UBERON:0003053	63.40	gold quality
monocyte	CL:0000576	62.63	gold quality
skeletal muscle tissue	UBERON:0001134	62.24	gold quality
granulocyte	CL:0000094	61.80	gold quality
primary visual cortex	UBERON:0002436	60.86	gold quality
prefrontal cortex	UBERON:0000451	60.82	gold quality
cortex of kidney	UBERON:0001225	60.56	gold quality
placenta	UBERON:0001987	60.56	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.20	gold quality
islet of Langerhans	UBERON:0000006	59.79	gold quality
blood	UBERON:0000178	59.02	gold quality
muscle of leg	UBERON:0001383	58.34	gold quality
superior frontal gyrus	UBERON:0002661	58.18	gold quality
liver	UBERON:0002107	57.12	gold quality
gastrocnemius	UBERON:0001388	56.93	gold quality
frontal cortex	UBERON:0001870	56.79	gold quality
corpus callosum	UBERON:0002336	56.52	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.22

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.